TCONS_00037348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037348
Unique NameTCONS_00037348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6297

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037348 ID=TCONS_00037348|Name=TCONS_00037348|organism=Clytia hemisphaerica|type=transcript|length=6297bp
AAGGCATGTTGTTATATTTTCCGAGAAAATTaggacaaaaaaatacaaaa
aaaaatatttaaaaaaatataaaggcaCTCTATCCTCTCCGCCTGAGAGG
CTTTGGAGCACTCCGAAAGCGACGCCTTTCACTAGTGAACATTCTTAGAC
TGAGACAAAGGAAAGGAAAAGCAGAAATGCCATCACCATTTTCCCGATTA
ACTAATACTTGAATATGTAAATTTCGCAAGTTATTATTTTTAGACCCTTG
TCTTTACTTTTCATCACTGTAGCCGTTTAACTTTTGATATTCCATTCCTG
ACCAAATTAGCACAACAAACGTTACTTTTTCATGAgatcaatgacgtcat
tttgacaGCGAAAAAAAGACTCAAAGATCTGAGAACTTTCAACATTATTT
TTCTGATTTCAAAATGACTTCATGGATCGCATAAATTGCCGAATAGCTTG
GTTAAGTATTTCAAGAAATTCTTCGACCTCCAACCTCGGAAATATTACGA
TTCAAAGACTCTTAGAtaaaaggatcattttttgatgatttcgtcTCAGA
GATAGCGGGGCCAGGCACACGGCACTATTTGACTTACAAACCCATCGTCT
GGAATTTTCACCAAGATTCGAACTTTCTCTTATTCAACGGGAAGTGGCCT
ATCTTATGAGATGTCGGAAGAGAAAGCAGTACTAATTCTATCGCGTGACC
ATTTACTGTAACTTCACAGAAATTTATTTCCTTCATCAACTTCAAAATCG
CTCAAAAGGTTTTACCGAACTTGGATAATTTCCTCGCAGTGCTTCGCAGC
GTAGGGTGTGACTTAATTGAGGGTTTTTACGATTTACATAAACGTATTTT
TGGGGATACCATTCCGCGGGGACCAAATTGCAGGATAAAATTGCAACTAT
GCATACTGGTTGTTGAAGACACAATTATTTAGAAGAGGTTTTTGAAGTGT
tcacaaaaaagattttcgttgtccttattattattgttaattAAATGTTT
GAATGAAACGTTTACGTTTACGTTTACGTTTagggtcaaaaaattttttt
gcaaaataattcAACAGTGATTGAGTTTTGTAATTGACTTTTGAAATTAA
TAcactcaaaaaacttttgacGCAAACTGCTCTAGATAATTGTATGGGGC
TAAAAATAACCGCTTTTAAAGCCAAAAATTAAATTCACGCGAAATTCTTC
GAAATTCCAATTTTAGAAATGATCAAGATATCttgcaattttttaactcg
aaattCGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGANCAAAC
TCCAATTTTAGAAATGATCAAGAGATCttgcaattttttaactcgaaatt
CGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGATTTTCACAATA
ATGTCCTCGTAGTTTTCAGGGGAATTTTAAACGGCGTTAGTTTGAATTTG
ACCAACAGCAAATTTTTGCTGTAGCCTAGACTCAAATTGATAGAAttaga
aaatcttgaaaaagttTCCTCAATTGagctcaaaatctttgaaaatatta
atgatTTGGTTTGGTATTAAAAGATGCGACAAAGTTACTTGACAAAAAAG
ATAAGAATGACAAATTGGTAATGATTACAAAAGGAGAACGCAATTTACAG
TAATCATGTAATAGCATTTCAGTCACAAAAATATTTGCTGTCTAGAAGTG
TTTTTGAAGTAGTCAATTTTGTTTGGAAAgggttaatttttgaaaactgt
tGAATTTATTGCGATGGCTAATCACTATGGCATGAAAGCTTAAACTTCTC
ATTTAATGTTTGGAAATTAAGGTGAATTGCGCACCCTGACGAAGAATTGA
TACCACAACGCGCACTTTTGATGAATTAGCGAATTGTACAgtcgactctc
gctaattcgagctCGAAAGGAGAATCAAATTTATTTGAAGTACATAGAAA
TTGTAATTGTAGAAGACATTCCACGAAGGTTTTTCCAAGTAACTGAGGAT
AAGCTCGAATCATAGAAGCTATCGAAATAGCGCGAGTTCACTGTAGTTGT
ACAGAGCAGCGTTTTAAGCGTTAATCACAGGGAAGGTCAATGTGGGCTCC
GAAATTTAGTGGAATGATCTTCTACcataaaccttttttttaagGACAAA
AGAAGCTTGAaaactaattaattttttgaaagttttccactcagaacatt
cttattccaaacccctttccccgcttattaatttttgggagaATGTTTTT
GAGAGTTCCCTCCTTTGTCCTAATTTGCTGTATAGggctccttttcaaaa
gttttcaaaccAGAACATTAACTTTTAAGAATTTCTCCACCCATCCGCTT
ATTCCGAacccccccccatttattaGGTACCGACCGGGAGtaggaaaaat
tttgattggaaTTGTAAAAATCGGCCACAATTCTATTCTCCAANCGACCG
GGAGtaggaaaatttttgattggaATTGTAAAAACCGGCCATAATTCTAT
TCTCCAAAACAAACTCCGAACTTGAATAGTAGTCTGCAAAGAGGTGCAAA
TTAAGAGGATTTACGAACGGGAGCTAAATTAAGCAGTATTTGAATTATAA
AAGCTCGAATTAGTGAGAGTCCATTAAacaatgtttttgaaaaccccATA
TCAAAATATAAGATCTCTGGGGAAATATATGAAAAAGATTCAGAAAGACT
CGGCATAATATTATTCGATAAACGGTTTTTAAATTGTTCATATTTGGGTT
CATTGACTTCAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaagtttt
caaaaatctgaagGAGAGGAAAGCAACGGACGCTAACAGACATGAATGCT
TTCGTGCATTTCGTGATTAATCGCTTAAATTAGGAAGCAAAGTGCTCTGT
ACAACCTATTAGATGAAACGCCTTTTTCGCGATAATGGAGAGAGCCAACT
TTTAGGTAATACCATTTTGAGCGATAAATGAAGTTTGATGAAGGAAATAA
ACACCTGTCCATAAAGTAAATGGTCACAGAGAAAGTTCAAACATTGGTGA
AAAATTCTATCCAATGGATTTGTATTCAATTTGTACATCCTTTCCCCGGT
CCCATCACAAAATCATCAGAAACAAACCTTTCCTTAAAATTTCTGAACCT
TAAGATTTCGGAGGAAGATTCACGAAGAAAATTCCCAAAATACCGTCCGA
ACTATTCAGCTAAGTAACGTTCGTTGCACTCCCTTAACAGACAGAACTTC
CACCCCGAAAACCTTTCTTGACCAGAATTtcgaagaaaataatttttcga
gttttgtCTGTCAAGGGTATTTGGCCAAAATGGAATATTGAGGTCTTAAC
GGCTACTAGATGAAGAGCAAAAACGaaagctaaaaaataatagTCTGCAA
AAATATTCAAGTATTAACCATCGAGAAAATGGTGAGTGACACTTCTATCA
TTTCCCTCCCATTGTAACCAGCCCATCTAGAATGTCAGGAGTATCAATAT
AGCTTCGTAATCAGAGCAGCTCTTTCACCTCTCATTGGTAGATAGGATAG
AGTGCCTTGTTGACAAAAATAAATAGATTGCTTGATTTCCTAACTCCTAA
CGAAAGGGCTTTACCAGACTGAGAAAATGaacgaaatcaaagaaaaatag
aCCATTGAGCTATCCNAATAAGATTTACGAACGGGAGCTAAATTAAGGAG
TATTTGAATTATAAAAACTCGAATTAGTGAGAGTccattaaacaattttt
ttgaaaaactcatatgaaaatatgaaatctcTGGGGAAATATGTTTAAAA
GATTCAGAAAGATTCGGCAAAATATAATTCGATAAACTGTCTTTAAATTG
TTGACATTTGGGTTCATTGACTTTAACAATTCCCAAAAGGGGAGGGGTTT
CAAAAAAANTCTGGGGAAATATGTTTAAAAGATTCAGAAAGATTCGGCAA
AATATAATTCGATAAACTGTCTTTAAATTGTTGACATTTGGGTTCATTGA
CTTTAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaaagttttcaaaa
atctgaagAAGGGGAAAGAAACGGACACTAACAGACAAGAATGCTTTCGT
GAATTTCGTGATAAATCACATAAATTAGGAAGCAAAGTGCTCTGTACAAC
CCATTAGAGGGAACGCTTTTTTCGCGATAATGGAGAGAGAGAGCTAACTT
TTAGGTAATACCTTTTGAGCGATAATGAAGTTTGATGAAGGAAATAAACA
CCTGTGCATAAAGTAAATGGTCACAGAGAAAGTTCAAAcattggtgaaaa
tttcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcgaat
cgcaatcattcgattgcgttcgattgcgttcgattgattcgattggaatt
ttcgttcgattccgttcgattgacatcgtctggtaaCGTTTGTTGCACTC
CCTTAACAGACAGAACTTCCACCCCAAAAACCTTTCTTGACCAGGAAATT
CATAAACAGAATTtcgaagaaaataatttttcgagttttgtCTGTCAAGG
GTATTTGGCCAAAATGGAATATTGAGGTCTAAACGGCTACTAGATGAAGA
GCAAAAACGaaagctaaaaaataatagTCTGCAAAAATATTCAAGTATTA
ACCATCGAGAAAATGGTGAGTGACACTTCTATCATTTCCCTTCCCTTGTA
CCCAGTCCATCTAGAATGTCACTAGGATCAATATAGCTTCGTAATCAGAG
CAGCTCTTTCACCTCTCATTGGCAGATAGGATAGAGTGCCTTGTTAGCAA
AAATAAGATTGCTTGATTTCCTAACTCCTAACGAAAGGGCTTTACCTGAC
tgagaaaatgaacaaaatcaaagaaaaatagaCCATTGAGCTATCCATTT
GATATCCATACAGGGACCACACGACGAATCTTTTCAAGCCAAAAGAATTA
ATGAATTAATGAAATTGTACATATATTTCCTGAAATAagggcaaaatttg
caaaaatctggaaaaaaagGATTCTATTGTCCATCGAAAAATCCTTCTAC
ACCATTTATGTACATTGAGAGAGGACGACCTGAAATCAATCTTTTACCCC
TTGGAAgttttaaaatatctttaaatccCCTCCTGGAAAATCAAATTAGG
TTCCGGGAAATTCCAAAACTTTGACGAGCCCATTATTCATGCCCAAAGGA
AATATAGATGCTTAGTCACCCAACCCCTTGGAAAAAACAACTCCCTTAAA
AAAGTGCGTAAAGGAACCTTGCAACCcccctggaattttttttggagaCC
TCCCTTGAAATGTTCGTCCAATCCCATGTATGGATTTAAATGAAATGGCC
CATTAATAAATTCTCATTAGCTGTAAGACGGAGACAGACAATTCTGACAG
AGAAGAATTTAGTTATACTATCACAAAACTCCAATTTCATGGCActgaaa
agttcaaaaaaagtTCGATTTTAAGAAAAGTCCCTTTCAGGCCACAAATA
ATTATTTACACttaatcaaaacattatttgtGATAAATAATTACAGTTCT
TTGAAAATATGTCTTCTTTCACACAAATAAGGATTGAAAGCTTGGGAAAA
ACACTGAAACCACAACAAAATCCTAGTGAGTCAAAATGTAGGCTTGTTTG
GGGTGTTTAAATTCTACACAAATCATTGGTTAGAAGGAAAAGGTAAACTA
TTCATTTCGAACTCTAATAAGTTAACCCATCAAAATAGCTGAATCGATAG
GCAAAAAGGACTAAAGATTTAATTGGCAAGATTTGGTAACCAATATTACA
GAATTGATATCGAGACAACTTCATTTAACAATCGCTCTTTAAATCACGAT
TTAGATAGATCAAGCAGCATTGGCCACGGTTGATGACTGGGCTAAAAGAG
GTCATCTTTCAAATCGATGAATACACTGCTATATTCAACCAAAGAAATCA
CTTCTAGATAATCCATCCATCAGCATATCATACTTCAACGATTGCATTGA
ATANCCACGGTTGATGACTGGGCTAAAAGAGGTCATCTTTCAAATCGATG
AATACACTGCTATATTCAACCAAAGAAATCACTTCTAGATAATCCATCCA
TCAGCATATCATACTTCAACGATTGCATTGAATACTCTTATAAATGCACC
TATGGTTCGCAACAATCACCAAGCAAGTAACTGCATCTACAGAGAAGACA
ACAACCATCAGATATGTCAAAACAATTCCATCATTATCACAAATTTTATC
CACCAATCAAATCCAGGTTGTTGAAGGGATTCTCATGCCACAAATNN
Run BLAST on NCBI

transcript from alignment at sc0001616:37143..43594+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037348 ID=TCONS_00037348|Name=TCONS_00037348|organism=Clytia hemisphaerica|type=transcript|length=6452bp|location=Sequence derived from alignment at sc0001616:37143..43594+ (Clytia hemisphaerica)
AAGGCATGTTGTTATATTTTCCGAGAAAATTaggacaaaaaaatacaaaa aaaaatatttaaaaaaatataaaggcaCTCTATCCTCTCCGCCTGAGAGG CTTTGGAGCACTCCGAAAGCGACGCCTTTCACTAGTGAACATTCTTAGAC TGAGACAAAGGAAAGGAAAAGCAGAAATGCCATCACCATTTTCCCGATTA ACTAATACTTGAATATGTAAATTTCGCAAGTTATTATTTTTAGACCCTTG TCTTTACTTTTCATCACTGTAGCCGTTTAACTTTTGATATTCCATTCCTG ACCAAATTAGCACAACAAACGTTACTTTTTCATGAgatcaatgacgtcat tttgacaGCGAAAAAAAGACTCAAAGATCTGAGAACTTTCAACATTATTT TTCTGATTTCAAAATGACTTCATGGATCGCATAAATTGCCGAATAGCTTG GTTAAGTATTTCAAGAAATTCTTCGACCTCCAACCTCGGAAATATTACGA TTCAAAGACTCTTAGAtaaaaggatcattttttgatgatttcgtcTCAGA GATAGCGGGGCCAGGCACACGGCACTATTTGACTTACAAACCCATCGTCT GGAATTTTCACCAAGATTCGAACTTTCTCTTATTCAACGGGAAGTGGCCT ATCTTATGAGATGTCGGAAGAGAAAGCAGTACTAATTCTATCGCGTGACC ATTTACTGTAACTTCACAGAAATTTATTTCCTTCATCAACTTCAAAATCG CTCAAAAGGTTTTACCGAACTTGGATAATTTCCTCGCAGTGCTTCGCAGC GTAGGGTGTGACTTAATTGAGGGTTTTTACGATTTACATAAACGTATTTT TGGGGATACCATTCCGCGGGGACCAAATTGCAGGATAAAATTGCAACTAT GCATACTGGTTGTTGAAGACACAATTATTTAGAAGAGGTTTTTGAAGTGT tcacaaaaaagattttcgttgtccttattattattgttaattAAATGTTT GAATGAAACGTTTACGTTTACGTTTACGTTTagggtcaaaaaattttttt gcaaaataattcAACAGTGATTGAGTTTTGTAATTGACTTTTGAAATTAA TAcactcaaaaaacttttgacGCAAACTGCTCTAGATAATTGTATGGGGC TAAAAATAACCGCTTTTAAAGCCAAAAATTAAATTCACGCGAAATTCTTC GAAATTCCAATTTTAGAAATGATCAAGATATCttgcaattttttaactcg aaattCGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGANCAAAC TCCAATTTTAGAAATGATCAAGAGATCttgcaattttttaactcgaaatt CGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGATTTTCACAATA ATGTCCTCGTAGTTTTCAGGGGAATTTTAAACGGCGTTAGTTTGAATTTG ACCAACAGCAAATTTTTGCTGTAGCCTAGACTCAAATTGATAGAAttaga aaatcttgaaaaagttTCCTCAATTGagctcaaaatctttgaaaatatta atgatTTGGTTTGGTATTAAAAGATGCGACAAAGTTACTTGACAAAAAAG ATAAGAATGACAAATTGGTAATGATTACAAAAGGAGAACGCAATTTACAG TAATCATGTAATAGCATTTCAGTCACAAAAATATTTGCTGTCTAGAAGTG TTTTTGAAGTAGTCAATTTTGTTTGGAAAgggttaatttttgaaaactgt tGAATTTATTGCGATGGCTAATCACTATGGCATGAAAGCTTAAACTTCTC ATTTAATGTTTGGAAATTAAGGTGAATTGCGCACCCTGACGAAGAATTGA TACCACAACGCGCACTTTTGATGAATTAGCGAATTGTACAgtcgactctc gctaattcgagctCGAAAGGAGAATCAAATTTATTTGAAGTACATAGAAA TTGTAATTGTAGAAGACATTCCACGAAGGTTTTTCCAAGTAACTGAGGAT AAGCTCGAATCATAGAAGCTATCGAAATAGCGCGAGTTCACTGTAGTTGT ACAGAGCAGCGTTTTAAGCGTTAATCACAGGGAAGGTCAATGTGGGCTCC GAAATTTAGTGGAATGATCTTCTACcataaaccttttttttaagGACAAA AGAAGCTTGAaaactaattaattttttgaaagttttccactcagaacatt cttattccaaacccctttccccgcttattaatttttgggagaATGTTTTT GAGAGTTCCCTCCTTTGTCCTAATTTGCTGTATAGggctccttttcaaaa gttttcaaaccAGAACATTAACTTTTAAGAATTTCTCCACCCATCCGCTT ATTCCGAacccccccccatttattaGGTACCGACCGGGAGtaggaaaaat tttgattggaaTTGTAAAAATCGGCCACAATTCTATTCTCCAANCGACCG GGAGtaggaaaatttttgattggaATTGTAAAAACCGGCCATAATTCTAT TCTCCAAAACAAACTCCGAACTTGAATAGTAGTCTGCAAAGAGGTGCAAA TTAAGAGGATTTACGAACGGGAGCTAAATTAAGCAGTATTTGAATTATAA AAGCTCGAATTAGTGAGAGTCCATTAAacaatgtttttgaaaaccccATA TCAAAATATAAGATCTCTGGGGAAATATATGAAAAAGATTCAGAAAGACT CGGCATAATATTATTCGATAAACGGTTTTTAAATTGTTCATATTTGGGTT CATTGACTTCAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaagtttt caaaaatctgaagGAGAGGAAAGCAACGGACGCTAACAGACATGAATGCT TTCGTGCATTTCGTGATTAATCGCTTAAATTAGGAAGCAAAGTGCTCTGT ACAACCTATTAGATGAAACGCCTTTTTCGCGATAATGGAGAGAGCCAACT TTTAGGTAATACCATTTTGAGCGATAAATGAAGTTTGATGAAGGAAATAA ACACCTGTCCATAAAGTAAATGGTCACAGAGAAAGTTCAAACATTGGTGA AAAATTCTATCCAATGGATTTGTATTCAATTTGTACATCCTTTCCCCGGT CCCATCACAAAATCATCAGAAACAAACCTTTCCTTAAAATTTCTGAACCT TAAGATTTCGGAGGAAGATTCACGAAGAAAATTCCCAAAATACCGTCCGA ACTATTCAGCTAAGTAACGTTCGTTGCACTCCCTTAACAGACAGAACTTC CACCCCGAAAACCTTTCTTGACCAGAATTtcgaagaaaataatttttcga gttttgtCTGTCAAGGGTATTTGGCCAAAATGGAATATTGAGGTCTTAAC GGCTACTAGATGAAGAGCAAAAACGaaagctaaaaaataatagTCTGCAA AAATATTCAAGTATTAACCATCGAGAAAATGGTGAGTGACACTTCTATCA TTTCCCTCCCATTGTAACCAGCCCATCTAGAATGTCAGGAGTATCAATAT AGCTTCGTAATCAGAGCAGCTCTTTCACCTCTCATTGGTAGATAGGATAG AGTGCCTTGTTGACAAAAATAAATAGATTGCTTGATTTCCTAACTCCTAA CGAAAGGGCTTTACCAGACTGAGAAAATGaacgaaatcaaagaaaaatag aCCATTGAGCTATCCNAATAAGATTTACGAACGGGAGCTAAATTAAGGAG TATTTGAATTATAAAAACTCGAATTAGTGAGAGTccattaaacaattttt ttgaaaaactcatatgaaaatatgaaatctcTGGGGAAATATGTTTAAAA GATTCAGAAAGATTCGGCAAAATATAATTCGATAAACTGTCTTTAAATTG TTGACATTTGGGTTCATTGACTTTAACAATTCCCAAAAGGGGAGGGGTTT CAAAAAAANTCTGGGGAAATATGTTTAAAAGATTCAGAAAGATTCGGCAA AATATAATTCGATAAACTGTCTTTAAATTGTTGACATTTGGGTTCATTGA CTTTAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaaagttttcaaaa atctgaagAAGGGGAAAGAAACGGACACTAACAGACAAGAATGCTTTCGT GAATTTCGTGATAAATCACATAAATTAGGAAGCAAAGTGCTCTGTACAAC CCATTAGAGGGAACGCTTTTTTCGCGATAATGGAGAGAGAGAGCTAACTT TTAGGTAATACCTTTTGAGCGATAATGAAGTTTGATGAAGGAAATAAACA CCTGTGCATAAAGTAAATGGTCACAGAGAAAGTTCAAAcattggtgaaaa tttcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcgaat cgcaatcattcgattgcgttcgattgcgttcgattgattcgattggaatt ttcgttcgattccgttcgattgacatcgtctggtaaCGTTTGTTGCACTC CCTTAACAGACAGAACTTCCACCCCAAAAACCTTTCTTGACCAGGAAATT CATAAACAGAATTtcgaagaaaataatttttcgagttttgtCTGTCAAGG GTATTTGGCCAAAATGGAATATTGAGGTCTAAACGGCTACTAGATGAAGA GCAAAAACGaaagctaaaaaataatagTCTGCAAAAATATTCAAGTATTA ACCATCGAGAAAATGGTGAGTGACACTTCTATCATTTCCCTTCCCTTGTA CCCAGTCCATCTAGAATGTCACTAGGATCAATATAGCTTCGTAATCAGAG CAGCTCTTTCACCTCTCATTGGCAGATAGGATAGAGTGCCTTGTTAGCAA AAATAAGATTGCTTGATTTCCTAACTCCTAACGAAAGGGCTTTACCTGAC tgagaaaatgaacaaaatcaaagaaaaatagaCCATTGAGCTATCCATTT GATATCCATACAGGGACCACACGACGAATCTTTTCAAGCCAAAAGAATTA ATGAATTAATGAAATTGTACATATATTTCCTGAAATAagggcaaaatttg caaaaatctggaaaaaaagGATTCTATTGTCCATCGAAAAATCCTTCTAC ACCATTTATGTACATTGAGAGAGGACGACCTGAAATCAATCTTTTACCCC TTGGAAgttttaaaatatctttaaatccCCTCCTGGAAAATCAAATTAGG TTCCGGGAAATTCCAAAACTTTGACGAGCCCATTATTCATGCCCAAAGGA AATATAGATGCTTAGTCACCCAACCCCTTGGAAAAAACAACTCCCTTAAA AAAGTGCGTAAAGGAACCTTGCAACCcccctggaattttttttggagaCC TCCCTTGAAATGTTCGTCCAATCCCATGTATGGATTTAAATGAAATGGCC CATTAATAAATTCTCATTAGCTGTAAGACGGAGACAGACAATTCTGACAG AGAAGAATTTAGTTATACTATCACAAAACTCCAATTTCATGGCActgaaa agttcaaaaaaagtTCGATTTTAAGAAAAGTCCCTTTCAGGCCACAAATA ATTATTTACACttaatcaaaacattatttgtGATAAATGATTacaattct ttgaaaatatgtCTTCTTTCACACAAATAAGGATTGAAAGCTTGGGAAAA ACACTANTTCAAAAAAAGTTCGATTTTAAGAAAAGTCCCTTTCAGGCCAC TAATAATTATTTACACttaatcaaaacattatttgtGATAAATAATTACA GTTCTTTGAAAATATGTCTTCTTTCACACAAATAAGGATTGAAAGCTTGG GAAAAACACTGAAACCACAACAAAATCCTAGTGAGTCAAAATGTAGGCTT GTTTGGGGTGTTTAAATTCTACACAAATCATTGGTTAGAAGGAAAAGGTA AACTATTCATTTCGAACTCTAATAAGTTAACCCATCAAAATAGCTGAATC GATAGGCAAAAAGGACTAAAGATTTAATTGGCAAGATTTGGTAACCAATA TTACAGAATTGATATCGAGACAACTTCATTTAACAATCGCTCTTTAAATC ACGATTTAGATAGATCAAGCAGCATTGGCCACGGTTGATGACTGGGCTAA AAGAGGTCATCTTTCAAATCGATGAATACACTGCTATATTCAACCAAAGA AATCACTTCTAGATAATCCATCCATCAGCATATCATACTTCAACGATTGC ATTGAATANCCACGGTTGATGACTGGGCTAAAAGAGGTCATCTTTCAAAT CGATGAATACACTGCTATATTCAACCAAAGAAATCACTTCTAGATAATCC ATCCATCAGCATATCATACTTCAACGATTGCATTGAATACTCTTATAAAT GCACCTATGGTTCGCAACAATCACCAAGCAAGTAACTGCATCTACAGAGA AGACAACAACCATCAGATATGTCAAAACAATTCCATCATTATCACAAATT TTATCCACCAATCAAATCCAGGTTGTTGAAGGGATTCTCATGCCACAAAT NN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022131XLOC_022131Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037348-exon-sc0001616-1491911889:37143..42664TCONS_00037348-exon-sc0001616-1491911889:37143..42664Clytia hemisphaericaexon
TCONS_00037348-exon-sc0001616-1510915933:37143..42664TCONS_00037348-exon-sc0001616-1510915933:37143..42664Clytia hemisphaericaexon
TCONS_00037348-exon-sc0001616-1575043694:37143..42664TCONS_00037348-exon-sc0001616-1575043694:37143..42664Clytia hemisphaericaexon
TCONS_00037348-exon-sc0001616-1491911889:42820..43594TCONS_00037348-exon-sc0001616-1491911889:42820..43594Clytia hemisphaericaexon
TCONS_00037348-exon-sc0001616-1510915933:42820..43594TCONS_00037348-exon-sc0001616-1510915933:42820..43594Clytia hemisphaericaexon
TCONS_00037348-exon-sc0001616-1575043694:42820..43594TCONS_00037348-exon-sc0001616-1575043694:42820..43594Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001616supercontigsc0001616:37143..43594 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.311153 0.343867 0.0695656 0.129251 1.29552 1.00441 1.38495 1.74666 0.724124 1.00875 1.09106 1.89652 0.970936 0.99917 0.480943 0.37797 0.35588 0.507887 0.342596 0.442757 0.981836 1.13934 0.361156 0.782707 1.78218 2.26353 0.566287 0.437735 0.497823 0.453798
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top