XLOC_022131 (gene) - C. hemisphaerica

Overview
NameXLOC_022131
Unique NameXLOC_022131
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001616:37143..43594+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022131 ID=XLOC_022131|Name=XLOC_022131|organism=Clytia hemisphaerica|type=gene|length=6452bp|location=Sequence derived from alignment at sc0001616:37143..43594+ (Clytia hemisphaerica)
AAGGCATGTTGTTATATTTTCCGAGAAAATTaggacaaaaaaatacaaaa aaaaatatttaaaaaaatataaaggcaCTCTATCCTCTCCGCCTGAGAGG CTTTGGAGCACTCCGAAAGCGACGCCTTTCACTAGTGAACATTCTTAGAC TGAGACAAAGGAAAGGAAAAGCAGAAATGCCATCACCATTTTCCCGATTA ACTAATACTTGAATATGTAAATTTCGCAAGTTATTATTTTTAGACCCTTG TCTTTACTTTTCATCACTGTAGCCGTTTAACTTTTGATATTCCATTCCTG ACCAAATTAGCACAACAAACGTTACTTTTTCATGAgatcaatgacgtcat tttgacaGCGAAAAAAAGACTCAAAGATCTGAGAACTTTCAACATTATTT TTCTGATTTCAAAATGACTTCATGGATCGCATAAATTGCCGAATAGCTTG GTTAAGTATTTCAAGAAATTCTTCGACCTCCAACCTCGGAAATATTACGA TTCAAAGACTCTTAGAtaaaaggatcattttttgatgatttcgtcTCAGA GATAGCGGGGCCAGGCACACGGCACTATTTGACTTACAAACCCATCGTCT GGAATTTTCACCAAGATTCGAACTTTCTCTTATTCAACGGGAAGTGGCCT ATCTTATGAGATGTCGGAAGAGAAAGCAGTACTAATTCTATCGCGTGACC ATTTACTGTAACTTCACAGAAATTTATTTCCTTCATCAACTTCAAAATCG CTCAAAAGGTTTTACCGAACTTGGATAATTTCCTCGCAGTGCTTCGCAGC GTAGGGTGTGACTTAATTGAGGGTTTTTACGATTTACATAAACGTATTTT TGGGGATACCATTCCGCGGGGACCAAATTGCAGGATAAAATTGCAACTAT GCATACTGGTTGTTGAAGACACAATTATTTAGAAGAGGTTTTTGAAGTGT tcacaaaaaagattttcgttgtccttattattattgttaattAAATGTTT GAATGAAACGTTTACGTTTACGTTTACGTTTagggtcaaaaaattttttt gcaaaataattcAACAGTGATTGAGTTTTGTAATTGACTTTTGAAATTAA TAcactcaaaaaacttttgacGCAAACTGCTCTAGATAATTGTATGGGGC TAAAAATAACCGCTTTTAAAGCCAAAAATTAAATTCACGCGAAATTCTTC GAAATTCCAATTTTAGAAATGATCAAGATATCttgcaattttttaactcg aaattCGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGANCAAAC TCCAATTTTAGAAATGATCAAGAGATCttgcaattttttaactcgaaatt CGATACGGTTAAAATCAAAGTTCTGGGTTTTGAACTAGATTTTCACAATA ATGTCCTCGTAGTTTTCAGGGGAATTTTAAACGGCGTTAGTTTGAATTTG ACCAACAGCAAATTTTTGCTGTAGCCTAGACTCAAATTGATAGAAttaga aaatcttgaaaaagttTCCTCAATTGagctcaaaatctttgaaaatatta atgatTTGGTTTGGTATTAAAAGATGCGACAAAGTTACTTGACAAAAAAG ATAAGAATGACAAATTGGTAATGATTACAAAAGGAGAACGCAATTTACAG TAATCATGTAATAGCATTTCAGTCACAAAAATATTTGCTGTCTAGAAGTG TTTTTGAAGTAGTCAATTTTGTTTGGAAAgggttaatttttgaaaactgt tGAATTTATTGCGATGGCTAATCACTATGGCATGAAAGCTTAAACTTCTC ATTTAATGTTTGGAAATTAAGGTGAATTGCGCACCCTGACGAAGAATTGA TACCACAACGCGCACTTTTGATGAATTAGCGAATTGTACAgtcgactctc gctaattcgagctCGAAAGGAGAATCAAATTTATTTGAAGTACATAGAAA TTGTAATTGTAGAAGACATTCCACGAAGGTTTTTCCAAGTAACTGAGGAT AAGCTCGAATCATAGAAGCTATCGAAATAGCGCGAGTTCACTGTAGTTGT ACAGAGCAGCGTTTTAAGCGTTAATCACAGGGAAGGTCAATGTGGGCTCC GAAATTTAGTGGAATGATCTTCTACcataaaccttttttttaagGACAAA AGAAGCTTGAaaactaattaattttttgaaagttttccactcagaacatt cttattccaaacccctttccccgcttattaatttttgggagaATGTTTTT GAGAGTTCCCTCCTTTGTCCTAATTTGCTGTATAGggctccttttcaaaa gttttcaaaccAGAACATTAACTTTTAAGAATTTCTCCACCCATCCGCTT ATTCCGAacccccccccatttattaGGTACCGACCGGGAGtaggaaaaat tttgattggaaTTGTAAAAATCGGCCACAATTCTATTCTCCAANCGACCG GGAGtaggaaaatttttgattggaATTGTAAAAACCGGCCATAATTCTAT TCTCCAAAACAAACTCCGAACTTGAATAGTAGTCTGCAAAGAGGTGCAAA TTAAGAGGATTTACGAACGGGAGCTAAATTAAGCAGTATTTGAATTATAA AAGCTCGAATTAGTGAGAGTCCATTAAacaatgtttttgaaaaccccATA TCAAAATATAAGATCTCTGGGGAAATATATGAAAAAGATTCAGAAAGACT CGGCATAATATTATTCGATAAACGGTTTTTAAATTGTTCATATTTGGGTT CATTGACTTCAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaagtttt caaaaatctgaagGAGAGGAAAGCAACGGACGCTAACAGACATGAATGCT TTCGTGCATTTCGTGATTAATCGCTTAAATTAGGAAGCAAAGTGCTCTGT ACAACCTATTAGATGAAACGCCTTTTTCGCGATAATGGAGAGAGCCAACT TTTAGGTAATACCATTTTGAGCGATAAATGAAGTTTGATGAAGGAAATAA ACACCTGTCCATAAAGTAAATGGTCACAGAGAAAGTTCAAACATTGGTGA AAAATTCTATCCAATGGATTTGTATTCAATTTGTACATCCTTTCCCCGGT CCCATCACAAAATCATCAGAAACAAACCTTTCCTTAAAATTTCTGAACCT TAAGATTTCGGAGGAAGATTCACGAAGAAAATTCCCAAAATACCGTCCGA ACTATTCAGCTAAGTAACGTTCGTTGCACTCCCTTAACAGACAGAACTTC CACCCCGAAAACCTTTCTTGACCAGAATTtcgaagaaaataatttttcga gttttgtCTGTCAAGGGTATTTGGCCAAAATGGAATATTGAGGTCTTAAC GGCTACTAGATGAAGAGCAAAAACGaaagctaaaaaataatagTCTGCAA AAATATTCAAGTATTAACCATCGAGAAAATGGTGAGTGACACTTCTATCA TTTCCCTCCCATTGTAACCAGCCCATCTAGAATGTCAGGAGTATCAATAT AGCTTCGTAATCAGAGCAGCTCTTTCACCTCTCATTGGTAGATAGGATAG AGTGCCTTGTTGACAAAAATAAATAGATTGCTTGATTTCCTAACTCCTAA CGAAAGGGCTTTACCAGACTGAGAAAATGaacgaaatcaaagaaaaatag aCCATTGAGCTATCCNAATAAGATTTACGAACGGGAGCTAAATTAAGGAG TATTTGAATTATAAAAACTCGAATTAGTGAGAGTccattaaacaattttt ttgaaaaactcatatgaaaatatgaaatctcTGGGGAAATATGTTTAAAA GATTCAGAAAGATTCGGCAAAATATAATTCGATAAACTGTCTTTAAATTG TTGACATTTGGGTTCATTGACTTTAACAATTCCCAAAAGGGGAGGGGTTT CAAAAAAANTCTGGGGAAATATGTTTAAAAGATTCAGAAAGATTCGGCAA AATATAATTCGATAAACTGTCTTTAAATTGTTGACATTTGGGTTCATTGA CTTTAACAATTCCCAAAAGGGGAGgggtttcaaaaaaaaagttttcaaaa atctgaagAAGGGGAAAGAAACGGACACTAACAGACAAGAATGCTTTCGT GAATTTCGTGATAAATCACATAAATTAGGAAGCAAAGTGCTCTGTACAAC CCATTAGAGGGAACGCTTTTTTCGCGATAATGGAGAGAGAGAGCTAACTT TTAGGTAATACCTTTTGAGCGATAATGAAGTTTGATGAAGGAAATAAACA CCTGTGCATAAAGTAAATGGTCACAGAGAAAGTTCAAAcattggtgaaaa tttcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcgaat cgcaatcattcgattgcgttcgattgcgttcgattgattcgattggaatt ttcgttcgattccgttcgattgacatcgtctggtaaCGTTTGTTGCACTC CCTTAACAGACAGAACTTCCACCCCAAAAACCTTTCTTGACCAGGAAATT CATAAACAGAATTtcgaagaaaataatttttcgagttttgtCTGTCAAGG GTATTTGGCCAAAATGGAATATTGAGGTCTAAACGGCTACTAGATGAAGA GCAAAAACGaaagctaaaaaataatagTCTGCAAAAATATTCAAGTATTA ACCATCGAGAAAATGGTGAGTGACACTTCTATCATTTCCCTTCCCTTGTA CCCAGTCCATCTAGAATGTCACTAGGATCAATATAGCTTCGTAATCAGAG CAGCTCTTTCACCTCTCATTGGCAGATAGGATAGAGTGCCTTGTTAGCAA AAATAAGATTGCTTGATTTCCTAACTCCTAACGAAAGGGCTTTACCTGAC tgagaaaatgaacaaaatcaaagaaaaatagaCCATTGAGCTATCCATTT GATATCCATACAGGGACCACACGACGAATCTTTTCAAGCCAAAAGAATTA ATGAATTAATGAAATTGTACATATATTTCCTGAAATAagggcaaaatttg caaaaatctggaaaaaaagGATTCTATTGTCCATCGAAAAATCCTTCTAC ACCATTTATGTACATTGAGAGAGGACGACCTGAAATCAATCTTTTACCCC TTGGAAgttttaaaatatctttaaatccCCTCCTGGAAAATCAAATTAGG TTCCGGGAAATTCCAAAACTTTGACGAGCCCATTATTCATGCCCAAAGGA AATATAGATGCTTAGTCACCCAACCCCTTGGAAAAAACAACTCCCTTAAA AAAGTGCGTAAAGGAACCTTGCAACCcccctggaattttttttggagaCC TCCCTTGAAATGTTCGTCCAATCCCATGTATGGATTTAAATGAAATGGCC CATTAATAAATTCTCATTAGCTGTAAGACGGAGACAGACAATTCTGACAG AGAAGAATTTAGTTATACTATCACAAAACTCCAATTTCATGGCActgaaa agttcaaaaaaagtTCGATTTTAAGAAAAGTCCCTTTCAGGCCACAAATA ATTATTTACACttaatcaaaacattatttgtGATAAATGATTacaattct ttgaaaatatgtCTTCTTTCACACAAATAAGGATTGAAAGCTTGGGAAAA ACACTANTTCAAAAAAAGTTCGATTTTAAGAAAAGTCCCTTTCAGGCCAC TAATAATTATTTACACttaatcaaaacattatttgtGATAAATAATTACA GTTCTTTGAAAATATGTCTTCTTTCACACAAATAAGGATTGAAAGCTTGG GAAAAACACTGAAACCACAACAAAATCCTAGTGAGTCAAAATGTAGGCTT GTTTGGGGTGTTTAAATTCTACACAAATCATTGGTTAGAAGGAAAAGGTA AACTATTCATTTCGAACTCTAATAAGTTAACCCATCAAAATAGCTGAATC GATAGGCAAAAAGGACTAAAGATTTAATTGGCAAGATTTGGTAACCAATA TTACAGAATTGATATCGAGACAACTTCATTTAACAATCGCTCTTTAAATC ACGATTTAGATAGATCAAGCAGCATTGGCCACGGTTGATGACTGGGCTAA AAGAGGTCATCTTTCAAATCGATGAATACACTGCTATATTCAACCAAAGA AATCACTTCTAGATAATCCATCCATCAGCATATCATACTTCAACGATTGC ATTGAATANCCACGGTTGATGACTGGGCTAAAAGAGGTCATCTTTCAAAT CGATGAATACACTGCTATATTCAACCAAAGAAATCACTTCTAGATAATCC ATCCATCAGCATATCATACTTCAACGATTGCATTGAATACTCTTATAAAT GCACCTATGGTTCGCAACAATCACCAAGCAAGTAACTGCATCTACAGAGA AGACAACAACCATCAGATATGTCAAAACAATTCCATCATTATCACAAATT TTATCCACCAATCAAATCCAGGTTGTTGAAGGGATTCTCATGCCACAAAT NN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037348TCONS_00037348Clytia hemisphaericatranscript
TCONS_00037349TCONS_00037349Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001616supercontigsc0001616:37143..43594 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.82 0.58 0.44 0.43 1.78 1.39 1.7 2.03 1.3 1.66 2.63 1.9 1.29 1.55 1.09 1.26 0.95 1.21 0.67 0.88 1.93 2.32 1.36 1.49 1.78 2.26 0.86 0.93 1.05 1.09