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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037261 ID=TCONS_00037261|Name=TCONS_00037261|organism=Clytia hemisphaerica|type=transcript|length=951bp
ATTCAGCACTAGCTTTTTGACAGTTGTAATCTAGAGTGCAAATAATTTAC
ATAAGATATTAAAATGCTGTTGCGTTCTTTTTATTCAAATGCTGTTTTAC
AGTCCCTAATCTTTTGTTATAGAGTATTTAGAAAATGATCCACCAGTTTC
TGATTTTGTCAAACCACTTTATCACATTGCAAAAATTACTTTTGGGGCTG
CTGTTACACTTCTTATGgtattcacacaaaaatttcatttgtctggGGCT
GCACTATCAATGCTTATTGAAATGTTGAACATCTTTTTGCCTACTGGTCA
TCTTCTATCACGATCACTTTACCactttataaaattgttcaccCTCCTAT
CACAGTCTCCAAAACTACATTACTTTTGTAAAGAATGTTTCATTAAAGTC
AATAAAACATCTAACTGTTGTTTAAATCTTGATTGTAAACAATCATCACT
ACCAGCATCAGATACCGCTTTTAAAAAGTCATACTTTCTTGAATTTGACA
TCCAGCATCAGATCAAGTCCATATTTCGGCATGCTTGAAATACTCAGTCG
TCGATTTCAAAGGATTTCAACGGGAATAAGTGACATTTATGATGGCTCCC
TTTATAAGTCATTTTCATCGCCAGGGTCATTTTTAAGCAACGTGAATCAT
ATTTCATTTCTTTGGAATACAGACGGAGTTCCTgtcttcaaatcttcaaa
gtCTTCATTATGGCCACTTCTCTATTCGATTAATGAATTATCTTTCAAGG
AACGtgcgaaaaaagaaaatgaattgaTCAATGGACTATGGTTTGGTGAA
AGCCATCCCAACATGTTGCTTTTTTTGCCTCCTCAACTCGAAACTATGAA
TGACATTAGAGAAAATGGTataaaaataaatgataaaGTTACGCTGAAAG
GAATGATTCTCTGTGGAACGTGCGATATGCCTGCAAAAGCAAGCGTTCTA
A Run BLAST on NCBI protein sequence of TCONS_00037261-protein >TCONS_00037261-protein ID=TCONS_00037261-protein|Name=TCONS_00037261-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MLEILSRRFQRISTGISDIYDGSLYKSFSSPGSFLSNVNHISFLWNTDGV
PVFKSSKSSLWPLLYSINELSFKERAKKENELINGLWFGESHPNMLLFLP
PQLETMNDIRENGIKINDKVTLKGMILCGTCDMPAKASVL Run BLAST on NCBI transcript from alignment at sc0001600:33822..34772 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037261 ID=TCONS_00037261|Name=TCONS_00037261|organism=Clytia hemisphaerica|type=transcript|length=951bp|location=Sequence derived from alignment at sc0001600:33822..34772 (Clytia hemisphaerica)
TTAGAACGCTTGCTTTTGCAGGCATATCGCACGTTCCACAGAGAATCATT
CCTTTCAGCGTAACtttatcatttatttttatACCATTTTCTCTAATGTC
ATTCATAGTTTCGAGTTGAGGAGGCAAAAAAAGCAACATGTTGGGATGGC
TTTCACCAAACCATAGTCCATTGAtcaattcattttcttttttcgcaCGT
TCCTTGAAAGATAATTCATTAATCGAATAGAGAAGTGGCCATAATGAAGa
ctttgaagatttgaagacAGGAACTCCGTCTGTATTCCAAAGAAATGAAA
TATGATTCACGTTGCTTAAAAATGACCCTGGCGATGAAAATGACTTATAA
AGGGAGCCATCATAAATGTCACTTATTCCCGTTGAAATCCTTTGAAATCG
ACGACTGAGTATTTCAAGCATGCCGAAATATGGACTTGATCTGATGCTGG
ATGTCAAATTCAAGAAAGTATGACTTTTTAAAAGCGGTATCTGATGCTGG
TAGTGATGATTGTTTACAATCAAGATTTAAACAACAGTTAGATGTTTTAT
TGACTTTAATGAAACATTCTTTACAAAAGTAATGTAGTTTTGGAGACTGT
GATAGGAGggtgaacaattttataaagtGGTAAAGTGATCGTGATAGAAG
ATGACCAGTAGGCAAAAAGATGTTCAACATTTCAATAAGCATTGATAGTG
CAGCCccagacaaatgaaatttttgtgtgaatacCATAAGAAGTGTAACA
GCAGCCCCAAAAGTAATTTTTGCAATGTGATAAAGTGGTTTGACAAAATC
AGAAACTGGTGGATCATTTTCTAAATACTCTATAACAAAAGATTAGGGAC
TGTAAAACAGCATTTGAATAAAAAGAACGCAACAGCATTTTAATATCTTA
TGTAAATTATTTGCACTCTAGATTACAACTGTCAAAAAGCTAGTGCTGAA
T Coding sequence (CDS) from alignment at sc0001600:33822..34772 >TCONS_00037261 ID=TCONS_00037261|Name=TCONS_00037261|organism=Clytia hemisphaerica|type=CDS|length=420bp|location=Sequence derived from alignment at sc0001600:33822..34772 (Clytia hemisphaerica)
TAGAACGCTTGCTTTTGCAGGCATATCGCACGTTCCACAGAGAATCATTC
CTTTCAGCGTAACtttatcatttatttttatACCATTTTCTCTAATGTCA
TTCATAGTTTCGAGTTGAGGAGGCAAAAAAAGCAACATGTTGGGATGGCT
TTCACCAAACCATAGTCCATTGAtcaattcattttcttttttcgcaCGTT
CCTTGAAAGATAATTCATTAATCGAATAGAGAAGTGGCCATAATGAAGac
tttgaagatttgaagacAGGAACTCCGTCTGTATTCCAAAGAAATGAAAT
ATGATTCACGTTGCTTAAAAATGACCCTGGCGATGAAAATGACTTATAAA
GGGAGCCATCATAAATGTCACTTATTCCCGTTGAAATCCTTTGAAATCGA
CGACTGAGTATTTCAAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037261-exon-sc0001600-1491911889:33822..34772 | TCONS_00037261-exon-sc0001600-1491911889:33822..34772 | Clytia hemisphaerica | exon |
| TCONS_00037261-exon-sc0001600-1510915933:33822..34772 | TCONS_00037261-exon-sc0001600-1510915933:33822..34772 | Clytia hemisphaerica | exon |
| TCONS_00037261-exon-sc0001600-1575043694:33822..34772 | TCONS_00037261-exon-sc0001600-1575043694:33822..34772 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001600 | supercontig | sc0001600:33822..34772 . |
Blast
The following BLAST results are available for this feature:
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