|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036327 ID=TCONS_00036327|Name=TCONS_00036327|organism=Clytia hemisphaerica|type=transcript|length=952bp
ttgctcttcaactttgattctttctacagtgattagattgacacatgcgc
gataaaatttctattattgctcttcagaggttaatatattctttgaaaac
ttaacctctgatactcagggtagttaATGTAGAGAACAGGAAAATTGAAA
TAAGCTTTTGACCTTGATTGAGCAGAGATTGATTCTtccataaaattttt
tttacagcaAGAAGTAGCAGACGCTAACAGAGTTTCGTCCCTAGGACTGA
CAATGaaacaaatatgaaaaaaaaacaaaaaaacaagcaGACCCataaaa
tagagaaaaatgagCAAATGGATTTTTTCAAACCTTCCTGGGTAATGCCT
tagcaaaaattcaaaaataaagccACTACCATCAAcatcaaattttaaat
aaagaaGTAATAGACGTTAACTGTACAATAAAATAGCGCTTTTACGTCTA
CATAGTAATAAGGTTAATGTTTCAATGGTCGGTATTTTTTACCCCAATTC
CCTTTTGACCACCTACCTGTCAGTGATTTTTTCATTATATTGACGTAATT
TTCATTTAGTTATGACGTCGTTACTGCGAAAGTAATAACTTATCTTTTTT
GTTGGGGAGGGGCTTTACGCTTTCCGTGGCACTGCAGCATGTTTTCCAAA
AACGGAGGAATACTTACGTTAGCGGCAGAAGACGTTCAAAACTTGAACAA
GAGGTTTTTAGCGGCCAGAAACCTGTGATTACGGCCGAATACCTGTGATT
ACGGCCGACTACCTGCAGATTTAATGTGTGATTGGTTTTCGGCCGAGAAA
GACCTACCAGACAGCAAAAATTACCTGGAAGACTTATGAATAAGAGAGCC
ATCTACCTATAGTATATAACGGGGGTAATGAGAGTGCTAAAATGACCTTA
TGATCCATGTATTTACTGTAATATAATTACAGGAGATTTGTGATAAAATG
TG Run BLAST on NCBI transcript from alignment at sc0001442:46230..47181 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036327 ID=TCONS_00036327|Name=TCONS_00036327|organism=Clytia hemisphaerica|type=transcript|length=952bp|location=Sequence derived from alignment at sc0001442:46230..47181 (Clytia hemisphaerica)
CACATTTTATCACAAATCTCCTGTAATTATATTACAGTAAATACATGGAT
CATAAGGTCATTTTAGCACTCTCATTACCCCCGTTATATACTATAGGTAG
ATGGCTCTCTTATTCATAAGTCTTCCAGGTAATTTTTGCTGTCTGGTAGG
TCTTTCTCGGCCGAAAACCAATCACACATTAAATCTGCAGGTAGTCGGCC
GTAATCACAGGTATTCGGCCGTAATCACAGGTTTCTGGCCGCTAAAAACC
TCTTGTTCAAGTTTTGAACGTCTTCTGCCGCTAACGTAAGTATTCCTCCG
TTTTTGGAAAACATGCTGCAGTGCCACGGAAAGCGTAAAGCCCCTCCCCA
ACAAAAAAGATAAGTTATTACTTTCGCAGTAACGACGTCATAACTAAATG
AAAATTACGTCAATATAATGAAAAAATCACTGACAGGTAGGTGGTCAAAA
GGGAATTGGGGTAAAAAATACCGACCATTGAAACATTAACCTTATTACTA
TGTAGACGTAAAAGCGCTATTTTATTGTACAGTTAACGTCTATTACttct
ttatttaaaatttgatgTTGATGGTAGTggctttatttttgaatttttgc
taAGGCATTACCCAGGAAGGTTTGAAAAAATCCATTTGctcatttttctc
tattttatGGGTCtgcttgtttttttgtttttttttcatatttgtttCAT
TGTCAGTCCTAGGGACGAAACTCTGTTAGCGTCTGCTACTTCTtgctgta
aaaaaaattttatggaAGAATCAATCTCTGCTCAATCAAGGTCAAAAGCT
TATTTCAATTTTCCTGTTCTCTACATtaactaccctgagtatcagaggtt
aagttttcaaagaatatattaacctctgaagagcaataatagaaatttta
tcgcgcatgtgtcaatctaatcactgtagaaagaatcaaagttgaagagc
aa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036327-exon-sc0001442-1491911889:46230..47181 | TCONS_00036327-exon-sc0001442-1491911889:46230..47181 | Clytia hemisphaerica | exon |
| TCONS_00036327-exon-sc0001442-1510915933:46230..47181 | TCONS_00036327-exon-sc0001442-1510915933:46230..47181 | Clytia hemisphaerica | exon |
| TCONS_00036327-exon-sc0001442-1575043694:46230..47181 | TCONS_00036327-exon-sc0001442-1575043694:46230..47181 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001442 | supercontig | sc0001442:46230..47181 . |
Blast
The following BLAST results are available for this feature:
|
