TCONS_00035626 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00035626
Unique Name	TCONS_00035626
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2201

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0001341:24562..30131+
coding sequence from alignment at sc0001341:24562..30131+

transcript sequence

>TCONS_00035626 ID=TCONS_00035626|Name=TCONS_00035626|organism=Clytia hemisphaerica|type=transcript|length=2201bp
AGCAAACGGAAATAAAGAAATTCTCTTTTTGAGGTGTGAaaactttttcg
atttttattgACGAACTCTGTTTCAattgaagaaatttcaaaacaaactc
aGACTTTTTCGCACGAAGAAATCACACTACACACTTTGTCgagattttct
tgagattttctgacaagttttaaaattgaaatcatttatttctctttaga
aaaagtaaaagaaaaaattttgcttgGAATGTCTGTCATTTTTCACATTT
GATTGGGGAAAGAAGAAGATTAAAAAGCCTGTTGTTTGTCCAGTGCTTGA
TCTACCGTTGTTGGGAAAATCAAATCACTTTTGTCACGCCTCCTGTGTCA
TAGCTAAAACATCATGGATTTCTTGTCGATTTTCGTTCTTCTCTTATCAC
TAATAGgaaatatattttcaaaggtGTTGAAAGTAAAACgactttccaat
gaaataacATATTCAAGAATTGCGGCTAATGTGGAACTCAAATTTCAAGT
ACAAACTGACGATAATGCTTACCTTGGTGTAGAAATAAGTTTCAAAGCTT
CAAAAGTAAATGAAGTTTCATCTTCAACCttattcaaaatcaatttcgaT
GACCAAGGAAAACCTTCACTTCCCCCAAAATATCTAGATGATAATTATAA
AGATCGTGTTACCTCAGTATTTCAAGACACAAGGTTGATTGTAACaatac
aaaatttgaaatcaacagACTTTGATACAGAATATATATGTATTGTGGAG
AATGAATTTGATAGATGGGTCAAACCCTCAAATCAAACTATATTAAAAGC
TGCAGTACCTCCCAAGATCAATGTGAATTTCTTCTTCCAAGAGAATAGTA
AGACTCAAACAAGACCAATAAATGAGCCAACAGAATTTGGATGTAAAGTT
GAAGGAAACACTGTACCGACTCCTAATATGAAATGGATAAAGATCGATGA
TGCTGGTAAAGAAGTTGTACCTTCAAAGATTACTGCACTATCTAAAGAAG
TGTATTTGAGTTTCAAACCATTGAAATTGGAAGATAGAGCAGCGTACAGA
TGTATTGCAGAGAATGTGGGAGGTTCTGATCAACAAGAATTCAATCTTGA
AGTTGGATACATTGATTTGAAGGCACCAAGCCCTGACAGTGAAACCATAG
AACTGAACATCGGTGATAGCATCCGAAAGATTTGCCCAATAATCGGGGTC
CCCATCATCAAAAACATTGAATGGCTTATATTCAATCAGACCACGCGTAA
CTACACCATCAAAAACAGTAACCAGATGTTTTTATACAAGATTAAAGATG
AAAGTGATTTTCGCACATATACTTGTTCAGGCAGCAACGATTATGGTGCA
AGGACGTACAATTTGACTGTCAAAAATGCAGGAGCGTCCACGAGCAAGCC
GGTGGTCACACAAAAACAAGTCAACGGTAGCGGAACCATCAATTATGGTG
CCTCAGTTTTTTTGGTATCTTTACTGCATTTCTTGCTTGTATTACTGCTA
TGATGACGTACTGATTAAATTGAAACatgcaaaaagtgaaaatatcGTAC
AGACCATTGTACAACCAATAAAACCGAAAACGTTGGAGTGTCGTTGATGG
AGGACTCGTTGCTACTGCCTCTTTTCATTCTAAGCAGTCATCGGCTAATA
AGCATAGATATCGTCTTACAGCTTTCTCCCGTTTCTAATGAAAGAAAACT
ACCGTTACACGATATTACTTATTGAATTGCTGAACTGAGTTAGTGTCTAG
AATGGTTTGTCCAGAGAAACAACTCCTTTATAGAAGATAGGTGAAATTTC
AGTGGATCGATAACATTAGAGATAATATAATTCTTACAAGAATACGTTGG
AAGAAACGAAAGGATAACCAACAACTTTGATGGGAAAAGCCAATTGCAAT
GCTCTCTTATCGGTCCTAAATTCAAGAGGCAGATTCCCTGTTTCTGCACT
CAGAAGATTaaattaatgacaatttttttaattgtgtttttattaatgtg
ttttgtttgtatttgtttcatttaaaaaatgttccTGAAAATTGTCATTT
GCCTTGAGTTGTATACCATTAAACTAATTAGTGATTtcaagtactctcgg
gtacctaatagccgtctcCCCCTGCCCGCTAAAtaatttatcgaaaaatt
tccacccaggacattcttattccaaccccccccccggcttattaattttt
g

Run BLAST on NCBI

protein sequence of TCONS_00035626-protein

>TCONS_00035626-protein ID=TCONS_00035626-protein|Name=TCONS_00035626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MDFLSIFVLLLSLIGNIFSKVLKVKRLSNEITYSRIAANVELKFQVQTDD
NAYLGVEISFKASKVNEVSSSTLFKINFDDQGKPSLPPKYLDDNYKDRVT
SVFQDTRLIVTIQNLKSTDFDTEYICIVENEFDRWVKPSNQTILKAAVPP
KINVNFFFQENSKTQTRPINEPTEFGCKVEGNTVPTPNMKWIKIDDAGKE
VVPSKITALSKEVYLSFKPLKLEDRAAYRCIAENVGGSDQQEFNLEVGYI
DLKAPSPDSETIELNIGDSIRKICPIIGVPIIKNIEWLIFNQTTRNYTIK
NSNQMFLYKIKDESDFRTYTCSGSNDYGARTYNLTVKNAGASTSKPVVTQ
KQVNGSGTINYGASVFLVSLLHFLLVLLL

Run BLAST on NCBI

transcript from alignment at sc0001341:24562..30131+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00035626 ID=TCONS_00035626|Name=TCONS_00035626|organism=Clytia hemisphaerica|type=transcript|length=5570bp|location=Sequence derived from alignment at sc0001341:24562..30131+ (Clytia hemisphaerica)
AGCAAACGGAAATAAAGAAATTCTCTTTTTGAGGTGTGAaaactttttcg
atttttattgACGAACTCTGTTTCAattgaagaaatttcaaaacaaactc
aGACTTTTTCGCACGAAGAAATCACACTACACACTTTGTCgagattttct
tgagattttctgacaagttttaaaattgaaatcatttatttctctttaga
aaaagtaaaagaaaaaattttgcttgGAATGTCTGTCATTTTTCACATTT
GATTGGGGAAAGAAGAAGATTAAAAAGCCTGTTGTTTGTCCAGTGCTTGA
TCTACCGTTGTTGGGAAAATCAAATCACTTTTGTCACGCCTCCTGTGTCA
TAGCTAAAACATCATGGATTTCTTGTCGATTTTCGTTCTTCTCTTATCAC
TAATAGGTAAGAAATACTGTATTTTTtataagttatggcatgtctgaaaa
actgaaaagtaccatatataatttttagatcgcattaggaTTAGctgaca
gaaaatgaccaaacaaatgactgaacatgaagggtactgtGATGTAGTTT
TTAACCTGAtatgtaacctaattgtttttctccgatttttgcgaaaaact
gcaaaaactGATTTATtcataaaaactgaaaattgaatttctcaagaatg
gtttatccaattgtcttcaaactttcaccaaagatgtatctcactaaagt
caatcatttgaaaaaataaatttttcaaaattttcatgacgtcagcagaa
NGtcaatcatttgaaaaaataaaattttcaaaattttcatgacgtcagca
gaatTATCAGgtggtttttcgcgaaaataggcgaaaaaacaattaggttg
tACAcaatcaggttagaaactacatcatagtaccctttatgttcagtcat
ttgtttggtcgttttctgtcggctaatgcgatctaaaaattatgttGATT
TTAAGACATACCATAACTTACCCAAGTGCAGAGAATGGTAAAAATGTCTA
CAAATTGACCCAGCAAGTCAAGTCAATATCTGCTATAAATATAGTTTGTA
TAGTGTTAAGATAAGGACCGCAGCATATCGGAGGGTCTTCATTGACTCAA
AAACATTATCAGGCTATTTGACATTTGTGGTCAGACTTTTGTAACCCAAT
GAGTACATGTGCTTAGTAGGCACTCTGTATTTTAAGTAGACACTTTTTAG
GAAAAATACAAGTTAGATAAAATTGAACAGTGGAATTTGATctacttttt
ttatatacagaGTGCCCATAcacactttttataagcattacaCCTATAAG
CAACTAGAAAAGGCTCagatttggcaaaatttgagcctaagaaaaatgta
ttttcctgATTTAGGCTGTTTTTGGTTTGGATTTTACTAGATTTTCAGAA
TTTCCCTAAAGTATTCTTCGGATATAAGCATCCTTATAAGTATTGTTCAG
CCTTGTCAAGTCCTCGACCTAATCATATCTCAGCCTGTTTTTGAATttgt
gtatgcttataaaaaacatgtatcacgTATGCAGCTAATCTTTTGGAGTC
AAAATGGTATCCTGATTAGGAAAAGCTCTATCAAGGCAAGTAATAAGGGA
TTGTACGTGGAAAATTCTTCAAAGGCtaatatagcctggatatccaggct
gtaaattatttcacagtctagttttagatattttatgttctgatttacag
cctggtctccctagagcgatttgcattttTGGATCAGAATGCattccgct
tgcttgcgctcactcccctaaagccgtaagggccgATCTACATTGCGCAG
AGGAATTCTGCAACANtcttcgctaaagccgtaagggccaatctacacgg
cgcggagcaattctaaagcaaaaataggatagtttccagttgctagtgaa
gatagggctttctgttacatgaaaacatgaaaaagaagaaaacagaggca
agttcattttccaagaaaacatggttggtcatgataatNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCTAATAGAA
AGGAAAGGAAAAGGAATTAAGGAaaggaaaactaaaaaaaaaacacaatt
tcacACACTGAGAGAAGCTTTACTAAACTTTTGGCTAATTGTAAGATTAT
TcctatttttttgcatttcccAAAGGTCATACAGTTAGAAATCAAATATA
GAAAAATTCTTAACCTTTAGGGTTGCTCTGGGTTCTAAGTCTCAGAATAA
TTCGTTTTTATATTAAGTATCGAAATTTGTAAACTTATTGAAAGTTTCAT
TTGTTCCTCATATCATATTTATATTTAAATTTTGTAGTTGAAAAGGTTGT
tctgtttacttttttgatttatttttttttggcttACAGTACCTTGAAAA
AGTGGTTTTGCCAAGCTGTGTAAGCTtagattgaaacattcttctttatt
ttcaggaaatatattttcaaaggtGTTGAAAGTAAAACgactttccaatg
aaataacATATTCAAGAATTGCGGCTAATGTGGAACTCAAATTTCAAGTA
CAAACTGACGATAATGCTTACCTTGGTGTAGAAATAAGTTTCAAAGCTTC
AAAAGTAAATGAAGTTTCATCTTCAACCttattcaaaatcaatttcgaTG
ACCAAGGAAAACCTTCACTTCCCCCAAAATATCTAGATGATAATTATAAA
GATCGTGTTACCTCAGTATTTCAAGACACAAGGTTGATTGTAACaataca
aaatttgaaatcaacagACTTTGATACAGAATATATATGTATTGTGGAGA
ATGAATTTGATAGATGGGTCAAACCCTCAAATCAAACTATATTAAAAGCT
GCAGGTAAGAAGATATTTCTTACATTTCAGGGCAAagtttcaatttgttt
ttttttaaggcaAAACTCATAGaaatttctcaacttcagttgagctagaa
tctgagaatgtctgtcagTGTGTCTGCCAAAAACTTTGGGatagcctgga
gacttcaaaaatggctggatttggatgaaatttggcacacttgttcctta
aggaaatatttgggggtgtttttttttattatttttcaaaaaatttagat
ttttggggccttggCACTAatcttttggtttgttttgctaCAATTGGGCC
TTTGAATAATTCTAAGCTACTGAAGTCGATCCCAGTGCATTGTGCACTAG
TTACAGAGCCCAGTGCATTGCGCACTGGCAACAATATTGTACATGATGTA
GAATATCAGAAActgttttgtttacaattttagTACCTCCCAAGATCAAT
GTGAATTTCTTCTTCCAAGAGAATAGTAAGACTCAAACAAGACCAATAAA
TGAGCCAACAGAATTTGGATGTAAAGTTGAAGGAAACACTGTACCGACTC
CTAATATGAAATGGATAAAGATCGATGATGCTGGTAAAGAAGTTGTACCT
TCAAAGATTACTGCACTATCTAAAGAAGTGTATTTGAGTTTCAAACCATT
GAAATTGGAAGATAGAGCAGCGTACAGATGTATTGCAGAGAATGTGGGAG
GTTCTGATCAACAAGAATTCAATCTTGAAGTTGGATGTAAGATTTTTAAT
CAACATGTATTTTCCTGACTCCCTAGCTTAGCTCATTGTAAGTTGTGTAA
AGTTTTTACTCCTTAAATTTCATCTAATGAGCTAGTCAAATATGTTCATG
CTCCTGATTTTTCTTATGAGTGATGATTCTATTGGAGATTCGACGAAGAG
GCAAAGCCTCCTCAGATATTCGATTCCAAACACTTTTTTAAGAATCTCAT
TTCTATTTTAATCCCTATTACTATTTTAGACATTGATTTGAAGGCACCAA
GCCCTGACAGTGAAACCATAGAACTGAACATCGGTGATAGCATCCGAAAG
ATTTGCCCAATAATCGGGGTCCCCATCATCAAAAACATTGAATGGCTTAT
ATTCAATCAGACCACGCGTAACTACACCATCAAAAACAGTAACCAGATGT
TTTTATACAAGATTAAAGATGAAAGTGATTTTCGCACATATACTTGTTCA
GGCAGCAACGATTATGGTGCAAGGACGTACAATTTGACTGTCAAAAATGC
AGGAGGTAATTATCATTTCGGTCTTATTTGTCACACTTGATAATATTATG
GGTAATGTGAAGGTAAAAATAGTGGAGCTTCATCTCTGGAAACGTAGCTA
AGCGTATTCTTGTGATCCAACCCTTGTAACTTccaatttgacacctaaaa
ccCTTTAAAAATGCGAAGAGACTTGTTTACCAGGTAGCGTTGACTTCAAA
AGGCGTTACATTGATTTTCTCAAAGACAGAGGTCATTTCTGAATAATTAG
TAGTAGTAGTTCCGGATATTTTGACTACTTTAGATCGCCCCTTGCACAAC
ATGGAGTATCTTGTACAATGCCATAACTATATGTTGCTGTATTCTTTGTT
TAGCGTCCACGAGCAAGCCGGTGGTCACACAAAAACAAGTCAACGGTAGC
GGAACCATCAATTATGGTGCCTCAGTTTTTTTGGTATCTTTACTGCATTT
CTTGCTTGTATTACTGCTATGATGACGTACTGATTAAATTGAAACatgca
aaaagtgaaaatatcGTACAGACCATTGTACAACCAATAAAACCGAAAAC
GTTGGAGTGTCGTTGATGGAGGACTCGTTGCTACTGCCTCTTTTCATTCT
AAGCAGTCATCGGCTAATAAGCATAGATATCGTCTTACAGCTTTCTCCCG
TTTCTAATGAAAGAAAACTACCGTTACACGATATTACTTATTGAATTGCT
GAACTGAGTTAGTGTCTAGAATGGTTTGTCCAGAGAAACAACTCCTTTAT
AGAAGATAGGTGAAATTTCAGTGGATCGATAACATTAGAGATAATATAAT
TCTTACAAGAATACGTTGGAAGAAACGAAAGGATAACCAACAACTTTGAT
GGGAAAAGCCAATTGCAATGCTCTCTTATCGGTCCTAAATTCAAGAGGCA
GATTCCCTGTTTCTGCACTCAGAAGATTaaattaatgacaatttttttaa
ttgtgtttttattaatgtgttttgtttgtatttgtttcatttaaaaaatg
ttccTGAAAATTGTCATTTGCCTTGAGTTGTATACCATTAAACTAATTAG
TGATTtcaagtactctcgggtacctaatagccgtctcCCCCTGCCCGCTA
AAtaatttatcgaaaaatttccacccaggacattcttattccaacccccc
ccccggcttattaatttttg

Coding sequence (CDS) from alignment at sc0001341:24562..30131+

>TCONS_00035626 ID=TCONS_00035626|Name=TCONS_00035626|organism=Clytia hemisphaerica|type=CDS|length=5700bp|location=Sequence derived from alignment at sc0001341:24562..30131+ (Clytia hemisphaerica)
ATGGATTTCTTGTCGATTTTCGTTCTTCTCTTATCACTAATAGgaaatat
attttcaaaggtGTTGAAAGTAAAACgactttccaatgaaataacATATT
CAAGAATTGCGGCTAATGTGGAACTCAAATTTCAAGTACAAACTGACGAT
AATGCTTACCTTGGTGTAGAAATAAGTTTCAAAGCTTCAAAAGTAAATGA
AGTTTCATCTTCAACCttattcaaaatcaatttcgaTGACCAAGGAAAAC
CTTCACTTCCCCCAAAATATCTAGATGATAATTATAAAGATCGTGTTACC
TCAGTATTTCAAGACACAAGGTTGATTGTAACaatacaaaatttgaaatc
aacagACTTTGATACAGAATATATATGTATTGTGGAGAATGAATTTGATA
GATGGGTCAAACCCTCAAATCAAACTATATTAAAAGCTGCAGTACCTCCC
AAGATCAATGTGAATTTCTTCTTCCAAGAGAATAGTAAGACTCAAACAAG
ACCAATAAATGAGCCAACAGAATTTGGATGTAAAGTTGAAGGAAACACTG
TACCGACTCCTAATATGAAATGGATAAAGATCGATGATGCTGGTAAAGAA
GTTGTACCTTCAAAGATTACTGCACTATCTAAAGAAGTGTATTTGAGTTT
CAAACCATTGAAATTGGAAGATAGAGCAGCGTACAGATGTATTGCAGAGA
ATGTGGGAGGTTCTGATCAACAAGAATTCAATCTTGAAGTTGGATACATT
GATTTGAAGGCACCAAGCCCTGACAGTGAAACCATAGAACTGAACATCGG
TGATAGCATCCGAAAGATTTGCCCAATAATCGGGGTCCCCATCATCAAAA
ACATTGAATGGCTTATATTCAATCAGACCACGCGTAACTACACCATCAAA
AACAGTAACCAGATGTTTTTATACAAGATTAAAGATGAAAGTGATTTTCG
CACATATACTTGTTCAGGCAGCAACGATTATGGTGCAAGGACGTACAATT
TGACTGTCAAAAATGCAGGAGCGTCCACGAGCAAGCCGGTGGTCACACAA
AAACAAGTCAACGGTAGCGGAACCATCAATTATGGTGCCTCAGTTTTTTT
GGTATCTTTACTGCATTTCTTGCTTGTATTACTGCTATGAATGGATTTCT
TGTCGATTTTCGTTCTTCTCTTATCACTAATAGgaaatatattttcaaag
gtGTTGAAAGTAAAACgactttccaatgaaataacATATTCAAGAATTGC
GGCTAATGTGGAACTCAAATTTCAAGTACAAACTGACGATAATGCTTACC
TTGGTGTAGAAATAAGTTTCAAAGCTTCAAAAGTAAATGAAGTTTCATCT
TCAACCttattcaaaatcaatttcgaTGACCAAGGAAAACCTTCACTTCC
CCCAAAATATCTAGATGATAATTATAAAGATCGTGTTACCTCAGTATTTC
AAGACACAAGGTTGATTGTAACaatacaaaatttgaaatcaacagACTTT
GATACAGAATATATATGTATTGTGGAGAATGAATTTGATAGATGGGTCAA
ACCCTCAAATCAAACTATATTAAAAGCTGCAGTACCTCCCAAGATCAATG
TGAATTTCTTCTTCCAAGAGAATAGTAAGACTCAAACAAGACCAATAAAT
GAGCCAACAGAATTTGGATGTAAAGTTGAAGGAAACACTGTACCGACTCC
TAATATGAAATGGATAAAGATCGATGATGCTGGTAAAGAAGTTGTACCTT
CAAAGATTACTGCACTATCTAAAGAAGTGTATTTGAGTTTCAAACCATTG
AAATTGGAAGATAGAGCAGCGTACAGATGTATTGCAGAGAATGTGGGAGG
TTCTGATCAACAAGAATTCAATCTTGAAGTTGGATACATTGATTTGAAGG
CACCAAGCCCTGACAGTGAAACCATAGAACTGAACATCGGTGATAGCATC
CGAAAGATTTGCCCAATAATCGGGGTCCCCATCATCAAAAACATTGAATG
GCTTATATTCAATCAGACCACGCGTAACTACACCATCAAAAACAGTAACC
AGATGTTTTTATACAAGATTAAAGATGAAAGTGATTTTCGCACATATACT
TGTTCAGGCAGCAACGATTATGGTGCAAGGACGTACAATTTGACTGTCAA
AAATGCAGGAGCGTCCACGAGCAAGCCGGTGGTCACACAAAAACAAGTCA
ACGGTAGCGGAACCATCAATTATGGTGCCTCAGTTTTTTTGGTATCTTTA
CTGCATTTCTTGCTTGTATTACTGCTATGAATGGATTTCTTGTCGATTTT
CGTTCTTCTCTTATCACTAATAGgaaatatattttcaaaggtGTTGAAAG
TAAAACgactttccaatgaaataacATATTCAAGAATTGCGGCTAATGTG
GAACTCAAATTTCAAGTACAAACTGACGATAATGCTTACCTTGGTGTAGA
AATAAGTTTCAAAGCTTCAAAAGTAAATGAAGTTTCATCTTCAACCttat
tcaaaatcaatttcgaTGACCAAGGAAAACCTTCACTTCCCCCAAAATAT
CTAGATGATAATTATAAAGATCGTGTTACCTCAGTATTTCAAGACACAAG
GTTGATTGTAACaatacaaaatttgaaatcaacagACTTTGATACAGAAT
ATATATGTATTGTGGAGAATGAATTTGATAGATGGGTCAAACCCTCAAAT
CAAACTATATTAAAAGCTGCAGTACCTCCCAAGATCAATGTGAATTTCTT
CTTCCAAGAGAATAGTAAGACTCAAACAAGACCAATAAATGAGCCAACAG
AATTTGGATGTAAAGTTGAAGGAAACACTGTACCGACTCCTAATATGAAA
TGGATAAAGATCGATGATGCTGGTAAAGAAGTTGTACCTTCAAAGATTAC
TGCACTATCTAAAGAAGTGTATTTGAGTTTCAAACCATTGAAATTGGAAG
ATAGAGCAGCGTACAGATGTATTGCAGAGAATGTGGGAGGTTCTGATCAA
CAAGAATTCAATCTTGAAGTTGGATACATTGATTTGAAGGCACCAAGCCC
TGACAGTGAAACCATAGAACTGAACATCGGTGATAGCATCCGAAAGATTT
GCCCAATAATCGGGGTCCCCATCATCAAAAACATTGAATGGCTTATATTC
AATCAGACCACGCGTAACTACACCATCAAAAACAGTAACCAGATGTTTTT
ATACAAGATTAAAGATGAAAGTGATTTTCGCACATATACTTGTTCAGGCA
GCAACGATTATGGTGCAAGGACGTACAATTTGACTGTCAAAAATGCAGGA
GCGTCCACGAGCAAGCCGGTGGTCACACAAAAACAAGTCAACGGTAGCGG
AACCATCAATTATGGTGCCTCAGTTTTTTTGGTATCTTTACTGCATTTCT
TGCTTGTATTACTGCTATGAATGGATTTCTTGTCGATTTTCGTTCTTCTC
TTATCACTAATAGgaaatatattttcaaaggtGTTGAAAGTAAAACgact
ttccaatgaaataacATATTCAAGAATTGCGGCTAATGTGGAACTCAAAT
TTCAAGTACAAACTGACGATAATGCTTACCTTGGTGTAGAAATAAGTTTC
AAAGCTTCAAAAGTAAATGAAGTTTCATCTTCAACCttattcaaaatcaa
tttcgaTGACCAAGGAAAACCTTCACTTCCCCCAAAATATCTAGATGATA
ATTATAAAGATCGTGTTACCTCAGTATTTCAAGACACAAGGTTGATTGTA
ACaatacaaaatttgaaatcaacagACTTTGATACAGAATATATATGTAT
TGTGGAGAATGAATTTGATAGATGGGTCAAACCCTCAAATCAAACTATAT
TAAAAGCTGCAGTACCTCCCAAGATCAATGTGAATTTCTTCTTCCAAGAG
AATAGTAAGACTCAAACAAGACCAATAAATGAGCCAACAGAATTTGGATG
TAAAGTTGAAGGAAACACTGTACCGACTCCTAATATGAAATGGATAAAGA
TCGATGATGCTGGTAAAGAAGTTGTACCTTCAAAGATTACTGCACTATCT
AAAGAAGTGTATTTGAGTTTCAAACCATTGAAATTGGAAGATAGAGCAGC
GTACAGATGTATTGCAGAGAATGTGGGAGGTTCTGATCAACAAGAATTCA
ATCTTGAAGTTGGATACATTGATTTGAAGGCACCAAGCCCTGACAGTGAA
ACCATAGAACTGAACATCGGTGATAGCATCCGAAAGATTTGCCCAATAAT
CGGGGTCCCCATCATCAAAAACATTGAATGGCTTATATTCAATCAGACCA
CGCGTAACTACACCATCAAAAACAGTAACCAGATGTTTTTATACAAGATT
AAAGATGAAAGTGATTTTCGCACATATACTTGTTCAGGCAGCAACGATTA
TGGTGCAAGGACGTACAATTTGACTGTCAAAAATGCAGGAGCGTCCACGA
GCAAGCCGGTGGTCACACAAAAACAAGTCAACGGTAGCGGAACCATCAAT
TATGGTGCCTCAGTTTTTTTGGTATCTTTACTGCATTTCTTGCTTGTATT
ACTGCTATGAATGGATTTCTTGTCGATTTTCGTTCTTCTCTTATCACTAA
TAGgaaatatattttcaaaggtGTTGAAAGTAAAACgactttccaatgaa
ataacATATTCAAGAATTGCGGCTAATGTGGAACTCAAATTTCAAGTACA
AACTGACGATAATGCTTACCTTGGTGTAGAAATAAGTTTCAAAGCTTCAA
AAGTAAATGAAGTTTCATCTTCAACCttattcaaaatcaatttcgaTGAC
CAAGGAAAACCTTCACTTCCCCCAAAATATCTAGATGATAATTATAAAGA
TCGTGTTACCTCAGTATTTCAAGACACAAGGTTGATTGTAACaatacaaa
atttgaaatcaacagACTTTGATACAGAATATATATGTATTGTGGAGAAT
GAATTTGATAGATGGGTCAAACCCTCAAATCAAACTATATTAAAAGCTGC
AGTACCTCCCAAGATCAATGTGAATTTCTTCTTCCAAGAGAATAGTAAGA
CTCAAACAAGACCAATAAATGAGCCAACAGAATTTGGATGTAAAGTTGAA
GGAAACACTGTACCGACTCCTAATATGAAATGGATAAAGATCGATGATGC
TGGTAAAGAAGTTGTACCTTCAAAGATTACTGCACTATCTAAAGAAGTGT
ATTTGAGTTTCAAACCATTGAAATTGGAAGATAGAGCAGCGTACAGATGT
ATTGCAGAGAATGTGGGAGGTTCTGATCAACAAGAATTCAATCTTGAAGT
TGGATACATTGATTTGAAGGCACCAAGCCCTGACAGTGAAACCATAGAAC
TGAACATCGGTGATAGCATCCGAAAGATTTGCCCAATAATCGGGGTCCCC
ATCATCAAAAACATTGAATGGCTTATATTCAATCAGACCACGCGTAACTA
CACCATCAAAAACAGTAACCAGATGTTTTTATACAAGATTAAAGATGAAA
GTGATTTTCGCACATATACTTGTTCAGGCAGCAACGATTATGGTGCAAGG
ACGTACAATTTGACTGTCAAAAATGCAGGAGCGTCCACGAGCAAGCCGGT
GGTCACACAAAAACAAGTCAACGGTAGCGGAACCATCAATTATGGTGCCT
CAGTTTTTTTGGTATCTTTACTGCATTTCTTGCTTGTATTACTGCTATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_020866	XLOC_020866	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00035626-protein	TCONS_00035626-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001341	supercontig	sc0001341:24562..30131 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.534308	0.799345	0.50463	0.547	30.743	25.5841	63.3404	64.4744	15.7136	18.5644	16.9197	12.9425	14.0384	10.8138	6.89718	7.35832	15.7766	21.9398	19.2923	18.096	20.2124	20.9645	12.0838	16.587	32.6072	39.9602	35.6225	27.8886	7.99423	7.33157

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003599	Ig_sub
IPR003598	Ig_sub2
IPR013783	Ig-like_fold
IPR013098	Ig_I-set
IPR007110	Ig-like_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00035626 vs. Swiss-Prot (Human)

BLAST of TCONS_00035626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00035626 (transcript) - C. hemisphaerica