TCONS_00035626-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035626-protein
Unique NameTCONS_00035626-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035626-protein ID=TCONS_00035626-protein|Name=TCONS_00035626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MDFLSIFVLLLSLIGNIFSKVLKVKRLSNEITYSRIAANVELKFQVQTDD
NAYLGVEISFKASKVNEVSSSTLFKINFDDQGKPSLPPKYLDDNYKDRVT
SVFQDTRLIVTIQNLKSTDFDTEYICIVENEFDRWVKPSNQTILKAAVPP
KINVNFFFQENSKTQTRPINEPTEFGCKVEGNTVPTPNMKWIKIDDAGKE
VVPSKITALSKEVYLSFKPLKLEDRAAYRCIAENVGGSDQQEFNLEVGYI
DLKAPSPDSETIELNIGDSIRKICPIIGVPIIKNIEWLIFNQTTRNYTIK
NSNQMFLYKIKDESDFRTYTCSGSNDYGARTYNLTVKNAGASTSKPVVTQ
KQVNGSGTINYGASVFLVSLLHFLLVLLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020866XLOC_020866Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035626TCONS_00035626Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 29..144
e-value: 170.0
score: 0.8
coord: 162..248
e-value: 4.1E-4
score: 29.7
coord: 259..337
e-value: 7.6
score: 12.5
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 168..237
e-value: 3.6E-4
score: 29.9
coord: 265..328
e-value: 5.5
score: 0.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 145..247
e-value: 8.6E-12
score: 44.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 32..144
e-value: 0.002
score: 17.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 253..344
e-value: 1.6E-6
score: 27.5
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 158..247
e-value: 2.3E-9
score: 37.1
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 150..246
score: 10.045
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 257..337
score: 7.595
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 260..336
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 159..247

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035626-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top