TCONS_00030091 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030091
Unique NameTCONS_00030091
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030091 ID=TCONS_00030091|Name=TCONS_00030091|organism=Clytia hemisphaerica|type=transcript|length=335bp
GACGTTCTATGGACGTGCAAAATGAAGTCACTTCCGTCCGTCCGAATTTG
GTCCGAAAAAGACGTCCTAATTGGACGCGAAATGGACGGTATGTGGACGT
TTCTTTTAATTTAGACGTCGGAAGGACGTTTTACAGACGTCACAAGGACG
TCTAACTGAGTCACTCCAACACGTGGACGTCAAAAGGACGTTTTACAGAC
GTCTTTTAGACCCAAACACGAGTGAGCTACAGACGTTTTAAGGACTTTTT
ATAGTCGCCATTTAGATGGCAAAACTTTCTCCATTTTTAGTTTTTATGAA
CGGATTGTTTTTTTTATCAAGACATTAATGACAAG
Run BLAST on NCBI

transcript from alignment at sc0000790:133164..133498

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030091 ID=TCONS_00030091|Name=TCONS_00030091|organism=Clytia hemisphaerica|type=transcript|length=335bp|location=Sequence derived from alignment at sc0000790:133164..133498 (Clytia hemisphaerica)
CTTGTCATTAATGTCTTGATAAAAAAAACAATCCGTTCATAAAAACTAAA
AATGGAGAAAGTTTTGCCATCTAAATGGCGACTATAAAAAGTCCTTAAAA
CGTCTGTAGCTCACTCGTGTTTGGGTCTAAAAGACGTCTGTAAAACGTCC
TTTTGACGTCCACGTGTTGGAGTGACTCAGTTAGACGTCCTTGTGACGTC
TGTAAAACGTCCTTCCGACGTCTAAATTAAAAGAAACGTCCACATACCGT
CCATTTCGCGTCCAATTAGGACGTCTTTTTCGGACCAAATTCGGACGGAC
GGAAGTGACTTCATTTTGCACGTCCATAGAACGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017218XLOC_017218Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030091-exon-sc0000790-1491911889:133164..133498TCONS_00030091-exon-sc0000790-1491911889:133164..133498Clytia hemisphaericaexon
TCONS_00030091-exon-sc0000790-1510915933:133164..133498TCONS_00030091-exon-sc0000790-1510915933:133164..133498Clytia hemisphaericaexon
TCONS_00030091-exon-sc0000790-1575043694:133164..133498TCONS_00030091-exon-sc0000790-1575043694:133164..133498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000790supercontigsc0000790:133164..133498 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97096	0.188972	1.21146	0.377274	1.51883	0.300049	0	1.01669	0	0.370835	0	0	0.227588	0.388943	0.159882	0.171578	1.26822	0.433295	1.12244	0	0.544466	0	0	0.587011	0.37814	0.269799	0	0	0.312515	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00030091 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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