TCONS_00028634 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028634
Unique NameTCONS_00028634
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028634 ID=TCONS_00028634|Name=TCONS_00028634|organism=Clytia hemisphaerica|type=transcript|length=107bp
TCGAGATCTCTTGGGAGCTTGGGAGCAAAACCAAAGAAACATTTTCTGGT
TCCTTCCTTGGACTTTCTCCATCAATTCCAGAACCAATGTGATTTTCGTT
CAAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000694:27392..27626+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028634 ID=TCONS_00028634|Name=TCONS_00028634|organism=Clytia hemisphaerica|type=transcript|length=235bp|location=Sequence derived from alignment at sc0000694:27392..27626+ (Clytia hemisphaerica)
TCGAGATCTCTTGGGAGCTTGGGAGCAAAACCAAAGAAACATTTTCTGGT
TCCTTCCTTGGGCTTTCTCCATCAATTCCAGAACCANTGTCAGCActgac
ctgcgtcctgtgtcctgcctcctgggtcctgtgtcctgcgtttcgaacca
accgaAAACCAAAGAAACATTTTCTGGTTCCTTCCTTGGACTTTCTCCAT
CAATTCCAGAACCAATGTGATTTTCGTTCAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016245XLOC_016245Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028634-exon-sc0000694-1491911889:27392..27431TCONS_00028634-exon-sc0000694-1491911889:27392..27431Clytia hemisphaericaexon
TCONS_00028634-exon-sc0000694-1510915933:27392..27431TCONS_00028634-exon-sc0000694-1510915933:27392..27431Clytia hemisphaericaexon
TCONS_00028634-exon-sc0000694-1575043694:27392..27431TCONS_00028634-exon-sc0000694-1575043694:27392..27431Clytia hemisphaericaexon
TCONS_00028634-exon-sc0000694-1491911889:27560..27626TCONS_00028634-exon-sc0000694-1491911889:27560..27626Clytia hemisphaericaexon
TCONS_00028634-exon-sc0000694-1510915933:27560..27626TCONS_00028634-exon-sc0000694-1510915933:27560..27626Clytia hemisphaericaexon
TCONS_00028634-exon-sc0000694-1575043694:27560..27626TCONS_00028634-exon-sc0000694-1575043694:27560..27626Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000694supercontigsc0000694:27392..27626 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028634 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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