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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028519 ID=TCONS_00028519|Name=TCONS_00028519|organism=Clytia hemisphaerica|type=transcript|length=1125bp
aaaaaactaCCCGGATGTTAGATTCGAATTCTTTTTTACGATCACAGAAC
CATAGATCATGACGTAACTGTAACTATGAATGCACTCTTCAAACTCCTCC
GAGAttatgatgaattttttttgaaacccATAGCATTAATTATGATGATT
ATGATGAAAAATTGCGTAACTTTTCTCGATTTCTctacccaatacgtcac
tttcaaccaatggGATTGGATCAAAAAGCATTTTGtgtaaaggcaattct
ttgttaaaagtgtaaatAAAccttgaacataacttttgtgctcaaatacc
aaaatcaattctttgactatagtcagagcccttaattaaatccagaaaat
tttgcgatttttttcgcttgcgaaatttaatattgcgaaatttaatccga
ttaaagcaaaataaaatgaagGGGTTCCTCTATTGGTATAGTACCGGCAC
TTTTGATTCACAATATTTCTGATCTCGTTATTTGTTCTTAAATCCCGGTA
CTCTTCTGGGTGGCGGCTCTGGACTCTGTCGAGAAGATTTTGGAGCCGTG
TGAGCGACAGTCGACCACTCAAGATGGTTTTACCCTTATATTTTTGCTCA
ACCTCCCTGAATCTTTGATTCTTCATTTCGTCTACGGTAAAGACACTTTC
CATTTCTTTCTTTATCATCGACACTGCATGTCGATGTGGATGATGTTTCT
TGCTCTTCTGGTATGAACCAGACCTGCATCTCGTCCGCCTCTAATATTGG
TGCCTCTTCTAGTTCATGAATCTAAAGAGACGAACATCAGGGTGTTGGTT
AAAAAGAGGCTTTTTGTCACGTCAGAGTTTatatattctcaacttcagtt
gagttagaatctgagaatgtgtgtgtgtgtgttgtCTGTCccgaaacttt
ggggcagcctggagacttcaaaaattgtttgatttggctaaaatttggca
cacttgttccttgggtgaatatctgtggtgtttttttcattttttgaaaa
ttttgatttttggggcctggggacgaatttttcgccaaaacaaggctaaa
accttagggcagcctggagacttcaaatattgttcgatttggctgaaatt
ttgcacacttgttccttgggtgaat Run BLAST on NCBI transcript from alignment at sc0000683:146986..148110 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028519 ID=TCONS_00028519|Name=TCONS_00028519|organism=Clytia hemisphaerica|type=transcript|length=1125bp|location=Sequence derived from alignment at sc0000683:146986..148110 (Clytia hemisphaerica)
attcacccaaggaacaagtgtgcaaaatttcagccaaatcgaacaatatt
tgaagtctccaggctgccctaaggttttagccttgttttggcgaaaaatt
cgtccccaggccccaaaaatcaaaattttcaaaaaatgaaaaaaacacca
cagatattcacccaaggaacaagtgtgccaaattttagccaaatcaaaca
atttttgaagtctccaggctgccccaaagtttcggGACAGacaacacaca
cacacacattctcagattctaactcaactgaagttgagaatatatAAACT
CTGACGTGACAAAAAGCCTCTTTTTAACCAACACCCTGATGTTCGTCTCT
TTAGATTCATGAACTAGAAGAGGCACCAATATTAGAGGCGGACGAGATGC
AGGTCTGGTTCATACCAGAAGAGCAAGAAACATCATCCACATCGACATGC
AGTGTCGATGATAAAGAAAGAAATGGAAAGTGTCTTTACCGTAGACGAAA
TGAAGAATCAAAGATTCAGGGAGGTTGAGCAAAAATATAAGGGTAAAACC
ATCTTGAGTGGTCGACTGTCGCTCACACGGCTCCAAAATCTTCTCGACAG
AGTCCAGAGCCGCCACCCAGAAGAGTACCGGGATTTAAGAACAAATAACG
AGATCAGAAATATTGTGAATCAAAAGTGCCGGTACTATACCAATAGAGGA
ACCCcttcattttattttgctttaatcggattaaatttcgcaatattaaa
tttcgcaagcgaaaaaaatcgcaaaattttctggatttaattaagggctc
tgactatagtcaaagaattgattttggtatttgagcacaaaagttatgtt
caaggTTTatttacacttttaacaaagaattgcctttacaCAAAATGCTT
TTTGATCCAATCccattggttgaaagtgacgtattgggtagAGAAATCGA
GAAAAGTTACGCAATTTTTCATCATAATCATCATAATTAATGCTATgggt
ttcaaaaaaaattcatcataaTCTCGGAGGAGTTTGAAGAGTGCATTCAT
AGTTACAGTTACGTCATGATCTATGGTTCTGTGATCGTAAAAAAGAATTC
GAATCTAACATCCGGGtagtttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028519-exon-sc0000683-1491911889:146986..148110 | TCONS_00028519-exon-sc0000683-1491911889:146986..148110 | Clytia hemisphaerica | exon |
| TCONS_00028519-exon-sc0000683-1510915933:146986..148110 | TCONS_00028519-exon-sc0000683-1510915933:146986..148110 | Clytia hemisphaerica | exon |
| TCONS_00028519-exon-sc0000683-1575043694:146986..148110 | TCONS_00028519-exon-sc0000683-1575043694:146986..148110 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000683 | supercontig | sc0000683:146986..148110 . |
Blast
The following BLAST results are available for this feature:
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