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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00067222-protein ID=TCONS_00067222-protein|Name=TCONS_00067222-protein|organism=Clytia hemisphaerica|type=polypeptide|length=781bp
MTVDKISIRSFLQAAEVGDLKKLENFLSKTIDVNVVNEQSQTALHLAAAN
GRQNAVRFLVTKGASLEFPNWCGWTALMYASYYGHSEIVSYLIENKAQVN
ACNSRLVTPLICAARCGKTAVIEILLQNGAYIVPKVVEKTPTSQLSNKEP
NMPTPVWRPPMTALMAAAQHGHHGICSMLMTYNAPIDYQNEANGYTALML
AAVNGHAKIVELLIQTGSADANIVNCRNQTAYVLSILRKRTDVENYLKSR
TTRVTKEITTKSHQPPIIQAARTGNIQEVEKILRANPKPDLNVSSTDGVT
PLIFASLNNHIDVVRLLLREDAKTDLQEENGWTALMHATIKRNVDIVKLL
LRAGADTKIKNNKNLTVFDLATLAGLPQITRLFAPGALASQGKQPVNNDR
DFKSSKSLLSKVTGKIKRGQQVNRVPVHDISLNPVEEHTPAHSEEVHKTS
SIIQSFEASTQSLNGPTKPKLALAAPTYNLPDDVMAPVLPPCPTLKSFDI
PKLPGVGAKQTGLGLNSSNGSNSGDNFNSSDESSSIKSFNRQNSSSSGIR
RPQMQNNILYQQPDSPQSSMTSSGLSGFTSVSNYNGRGSMPNSGFKSPTN
RPSLNFAKPNFPSQWQHQQPPPQHQAFSPAFQPPMPPYLRQGAKSPPLTL
NDLSIRSVSSNSGDKNGDANISDFLQRLELEKYGAQFSEQEVDMIALREM
DDNDLKDIGVDQTIYRKRIIDAVTPNQKHRGASNNRIPSHARFSPTPPGQ
PNALIPTAGFPKNQTSFASGMRGANGYPLIR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 346..360
score: 42.78
coord: 194..209
score: 42.0 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 105..135
e-value: 3.4
score: 16.7
coord: 262..293
e-value: 440.0
score: 7.6
coord: 193..223
e-value: 2.5E-5
score: 33.7
coord: 159..188
e-value: 34.0
score: 13.3
coord: 39..68
e-value: 0.012
score: 24.8
coord: 297..326
e-value: 0.0016
score: 27.7
coord: 72..101
e-value: 2.4E-5
score: 33.8
coord: 330..359
e-value: 8.1E-5
score: 32.0 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 193..218
score: 10.927 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 72..104
score: 10.82 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 330..362
score: 12.315 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 39..71
score: 11.381 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 297..329
score: 11.434 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 663..729
e-value: 1.3E-6
score: 37.9 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 669..723
e-value: 1.5E-8
score: 34.9 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 670..723
score: 10.883 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 4..81
e-value: 1.9E-20
score: 72.2 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 149..256
e-value: 2.7E-20
score: 72.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 257..461
e-value: 1.8E-32
score: 111.9 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 82..119
e-value: 6.4E-17
score: 61.0 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 13..101
e-value: 1.1E-16
score: 61.1
coord: 268..361
e-value: 4.1E-15
score: 56.0
coord: 160..223
e-value: 2.9E-11
score: 43.7 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 14..383
score: 60.483 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 12..384 |
| None | No IPR available | GENE3D | 2.40.10.190 | | coord: 120..148
e-value: 0.3
score: 10.8 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 663..724
e-value: 9.8E-12
score: 44.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 511..669 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 726..747 |
| None | No IPR available | CDD | cd09487 | SAM_superfamily | coord: 671..723
e-value: 5.60695E-10
score: 55.3233 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 34..180
e-value: 1.50216E-28
score: 110.936 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 187..351
e-value: 5.54708E-27
score: 106.314 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 669..724 |
Blast
BLAST of TCONS_00067222-protein vs. Swiss-Prot (Human)
Match: ANKS6 (Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens GN=ANKS6 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 2.282e-54 Identity = 122/354 (34.46%), Postives = 194/354 (54.80%), Query Frame = 0
Query: 34 NVVNEQSQTALHLAAANGRQNAVRFLVTKGASLEFPNWCGWTALMYASYYGHSEIVSYLIENKAQVNACNSRLVTPLICAARCGKTAVIEILLQNGAYIVPKVVEKTPTSQLSNKEPNMPTPVWRPPMTALMAAAQHGHHGICSMLMTYNAPIDYQNEANGYTALMLAAVNGHAKIVELLIQTGSADANIVNCRNQTAYVLSILRKRTDVENYLKSRTTRVTKEITTKSHQPPIIQAARTGNIQEVEKILRANPKPDLNVSSTDGVTPLIFASLNNHIDVVRLLLREDAKTDLQEE-NGWTALMHATIKRNVDIVKLLLRAGADTKIKNNKNLTVFDLATLAGLP--QITRLFA 384
+ +E TAL AAA G + VRFL+ +GAS+ N GW+ALM A+ +GH + L+++ A VNA N + L A+R G V+++LL+ GA+ V P+ + + P+ +TALMAA QHGH + +LM + A ++ G++ LMLAA+ G + + L++ G A+ + ++ +TA+ +++ K D+ +YL TT V + + +P I A + GN Q V++I +P +N+ + DG TPL+ A++ + +V+LL+ A D Q+ +GWTALM AT N +IVK LL GAD ++ T FDL L P ++ RL A
Sbjct: 72 DCSDEAGNTALQFAAAGGHEPLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAF----VDHHHPSGEQLGLGGSRDEPL---DITALMAAIQHGHEAVVRLLMEWGADPNHAARTVGWSPLMLAALTGRLGVAQQLVEKG-ANPDHLSVLEKTAFEVALDCKHRDLVDYLDPLTT-VRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPS-HVNLVNGDGATPLMLAAVTGQLALVQLLVERHADVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLNDPDTELVRLLA 415
The following BLAST results are available for this feature:
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