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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028445 ID=TCONS_00028445|Name=TCONS_00028445|organism=Clytia hemisphaerica|type=transcript|length=880bp
TCATTAAAAGGAGGTCATCGACCCATATAATATCAGTCTGTCTTTTTTCt
ggtcaaattttcattttttggttaAAACTCAAATATAACCTATTCACAAC
AACTTCCCAAAGTTTCAGGTcataaaaagaagaagaaggttAAAAATTTT
AGTTATAAAGATCCTTACCTAGACAGAAATTGGTCTCCGCCCGTTTGCGC
CCGTATTTCCGCCCAGAGATAGAACAGCTATAATTCTGCTTCTAGCGCTT
CAAGCTGCTTGAAATTTTTTACGGGACGTCTTAAAGTCGCAAAGATTCTT
TATGCTAAGTTCAAAAGTCGCTTACGCGTACCGCGATCGAGTTATAAACA
TTGTAAATATTCACTGCCCTTGAAATCATTTGAGAGGTGGGTTGACTGAG
AGTAACGGAGTAACCTCTGTGCTTTATGTGTTTCTATGTGTTTATTTCCT
GTTTTGAGTGGCATTTTAAAGCTCATTTTTACTTAAAAGAGGTCTTTAAT
ACTCCAAGGAACCATGCTTCTCAATATTATATGAGATTTATTCTGAATTG
AGTTTATAATAACCTCCAAAGATATTAAGCACAAGGTAcgtaaataattt
tctttgttttttgtattttcatcaCCATCATTCTTATGAGATTCTTTTAA
ACACCCATTTATAGTGAGTAAGCATGTATGAGATATGTTTGCATATGTAT
TTGAAGTTTGATGAGGATGATTTGCTACGATTTTGGATCATTTTGTGGTT
CATTTCGGTTCATTtcgaaaaactgtttaaaaggggtcgttgtaaaacat
ggagtagctccatggagtactccaatggagtacctattggagtactctaa
aaatattgcagaCCAGATTTTAGATCGCCN Run BLAST on NCBI transcript from alignment at sc0000678:132718..133597 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028445 ID=TCONS_00028445|Name=TCONS_00028445|organism=Clytia hemisphaerica|type=transcript|length=880bp|location=Sequence derived from alignment at sc0000678:132718..133597 (Clytia hemisphaerica)
NGGCGATCTAAAATCTGGtctgcaatatttttagagtactccaataggta
ctccattggagtactccatggagctactccatgttttacaacgacccctt
ttaaacagtttttcgaAATGAACCGAAATGAACCACAAAATGATCCAAAA
TCGTAGCAAATCATCCTCATCAAACTTCAAATACATATGCAAACATATCT
CATACATGCTTACTCACTATAAATGGGTGTTTAAAAGAATCTCATAAGAA
TGATGGtgatgaaaatacaaaaaacaaagaaaattatttacgTACCTTGT
GCTTAATATCTTTGGAGGTTATTATAAACTCAATTCAGAATAAATCTCAT
ATAATATTGAGAAGCATGGTTCCTTGGAGTATTAAAGACCTCTTTTAAGT
AAAAATGAGCTTTAAAATGCCACTCAAAACAGGAAATAAACACATAGAAA
CACATAAAGCACAGAGGTTACTCCGTTACTCTCAGTCAACCCACCTCTCA
AATGATTTCAAGGGCAGTGAATATTTACAATGTTTATAACTCGATCGCGG
TACGCGTAAGCGACTTTTGAACTTAGCATAAAGAATCTTTGCGACTTTAA
GACGTCCCGTAAAAAATTTCAAGCAGCTTGAAGCGCTAGAAGCAGAATTA
TAGCTGTTCTATCTCTGGGCGGAAATACGGGCGCAAACGGGCGGAGACCA
ATTTCTGTCTAGGTAAGGATCTTTATAACTAAAATTTTTaaccttcttct
tctttttatgACCTGAAACTTTGGGAAGTTGTTGTGAATAGGTTATATTT
GAGTTTtaaccaaaaaatgaaaatttgaccaGAAAAAAGACAGACTGATA
TTATATGGGTCGATGACCTCCTTTTAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028445-exon-sc0000678-1491911889:132718..133597 | TCONS_00028445-exon-sc0000678-1491911889:132718..133597 | Clytia hemisphaerica | exon |
| TCONS_00028445-exon-sc0000678-1510915933:132718..133597 | TCONS_00028445-exon-sc0000678-1510915933:132718..133597 | Clytia hemisphaerica | exon |
| TCONS_00028445-exon-sc0000678-1575043694:132718..133597 | TCONS_00028445-exon-sc0000678-1575043694:132718..133597 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000678 | supercontig | sc0000678:132718..133597 . |
Blast
The following BLAST results are available for this feature:
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