TCONS_00028441 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028441
Unique NameTCONS_00028441
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4522

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028441 ID=TCONS_00028441|Name=TCONS_00028441|organism=Clytia hemisphaerica|type=transcript|length=4522bp
AGTATCACTTATGCCAAGTTTGTTATTATAGGATTCTGGGTATATTCTTT
ATtgtcaataaaaaattttttggaagaaaattaatatataaaactaaaat
attcacaatttctttcaaattactCAAAGTGTTGTTCAGTATACTACATA
AATGAATGAACTACTAGAAATCTGGCGTATAAAAATGCATTCTATTTCGT
TCTAATGCAATTTGTActgatttcttcttctttttagaTGATGAGCCTTG
ATCAATATGATTGTTAAAAAAGGAATTTGCATAGTTCAAGTAAGGCACTG
AACTAGAATAATTAGATGTCTTTTTCAATGCTGATTTCTTTGTCGTCACA
GGTTGTATTGTATTCAGATTGTTGTTGCTCGTATCTGGTAAAGACCAGTT
TGAATTAGGCGGATTCTCTTTAACTTGACTATTGGCAGACTTTGATATTG
GCGGTAGTGCTTGAGTTTGAAGTTGCTGTAGAAAACGTATATTCTCAGCT
AAACTTAATTCAGCTTTTCTAAGTATGTTTTCACTTGGATCGAAAGCTTT
TTGTTGATGTATCCGTTGGTCCTGCAATGTTCTATTGTATTCTtgtagtt
tttgtttttgctggTGTTCTTGTTCCTTTAATGTTCTTTGTTGTTCGTAT
AACCTATATTGATCTTCCAGTTTTATTTGTTGTTCTTTATGCTGTTGCTC
TTCGTTTAAAAGCTTTTGTTTTTGTCTTTGATCTTCTTCTCGAGCTTTTT
GTTGTTCtaacattttcatttgtttttgttgtaGCTGTTCTTTCTCCCTC
TGCTTCTGTTCTTCGTAAAGACGATATTGTTCTTCGATTCGTTGATGTTC
TGATAGTTTTTGTTCTTTCAGATTTTGTTGAGCGTCGTGTAATCGTCTCT
GTCGTTTATCTTCTTCATCCTTTAATTTTTGCTGCTGTAAGAGCTGTTCT
CTTTTTTGTTGTTCCTGTTGTTCTCTCTTCATTTGCTCCTGTTGTAAAAG
TTGTTCCCTGGTTCTTTGCTCTTGTTCTCGCTGTTTTTGTTGTAGTTGCA
GTCTCTCTAATACCATACTTGCTTGACGACTCAATGAATTAGAtaaatca
actttcttttgaaCACTATCCAAACTATGCGACAATCTTCTCTCGTTGTC
TTTAAGATAATCTTTATTGAGATAATCAAAAGTATCTTTATAGTTCTGTT
GTAAATTCTCAGATACCATGATTTGTGAACGTGGTTTAGGATCTGGGAAT
GAGAAACTGAGTCTTGCAGCGTTCTGTTGATGGTAACCATTCATTGGATT
GTCTTGATGATAGTACCGTTCGTGTTGGTGATATTCAGATGCAGGTCttc
tattttgaattttcggCAACTCATTACTGTCATCACCGAAGAATATGGGC
TTGATTCTTCGATCAGTAGATGAAGTGAAATGTTCTGATATCGGTCTGCT
AGGAGGAAATCCTCTATTTTGAATGGGTGGGATAGGTTGGATAAGAGGTT
GACTAGTCGTTTGGTTATATTGTTGTTGCTGATGTTTTGTTAAAGAGGGC
ATTGGTGGTCTACTGTTAGTTGGTATGAAAGTGTGAGTGAAAACTTTCTC
ATCTTCATATTCCTTGATCTTATTCTCGAAGCTATCATCATCTGGAAGTT
TGGTTCGTTTTTTACTTAAGTAAGAACGATAAAGACGTATACTATCGTTA
ACTCCTTTATTGGAGTCAATCAATGTCGTTGATTTGTTGACGTACGTCGT
AAAGTCTGTCGGTAGAAGTGATGACGTTGGTGCATCATTGGTGGAAGCAG
ATCTTGACCGATATGGTAATGAATCACTTGGTATTGGAAGGTTTGAAGGA
TCTTTTGGTGAAGTGTGTTGAACGTTCGGTGAAGCTGACATACTCcggtt
attattattatttggtACTATCATCGTTTTTCGCCAAACTACACCGGTTT
GGACGCGTGATTCCTTTTCTTTGGGATAACCTTTcggtggtggtggtggt
ccAATAATTGANGCTCCTGTTGTAAAAGTTGTTCCCTGGTTCTTTGCTCT
TGTTCTCGCTGTTTTTGTTGTAGTTGCAGTCTCTCTAATACCATACTTGC
TTGACGACTCAATGAATTAGAtaaatcaactttcttttgaaCACTATCCA
AACTATGCGACAATCTTCTCTCGTTGTCTTTAAGATAATCTTTATTGAGA
TAATCAAAAGTATCTTTATAGTTCTGTTGTAAATTCTCAGATACCATGAT
TTGTGAACGTGGTTTAGGATCTGGGAATGAGAAACTGAGTCTTGCAGCGT
TCTGTTGATGGTAACCATTCATTGGATTGTCTTGATGATAGTACCGTTCG
TGTTGGTGATATTCAGATGCAGGTCttctattttgaattttcggCAACTC
ATTACTGTCATCACCGAAGAATATGGGCTTGATTCTTCGATCAGTAGATG
AAGTGAAATGTTCTGATATCGGTCTGCTAGGAGGAAATCCTCTATTTTGA
ATGGGTGGGATAGGTTGGATAAGAGGTTGACTAGTCGTTTGGTTATATTG
TTGTTGCTGATGTTTTGTTAAAGAGGGCATTGGTGGTCTACTGTTAGTTG
GTATGAAAGTGTGAGTGAAAACTTTCTCATCTTCATATTCCTTGATCTTA
TTCTCGAAGCTATCATCATCTGGAAGTTTGGTTCGTTTTTTACTTAAGTA
AGAACGATAAAGACGTATACTATCGTTAACTCCTTTATTGGAGTCAATCA
ATGTCGTTGATTTGTTGACGTACGTCGTAAAGTCTGTCGGTAGAAGTGAT
GACGTTGGTGCATCATTGGTGGAAGCAGATCTTGACCGATATGGTAATGA
ATCACTTGGTATTGGAAGGTTTGAAGGATCTTTTGGTGAAGTGTGTTGAA
CGTTCGGTGAAGCTGACATACTCcggttattattattatttggtACTATC
ATCGTTTTTCGCCAAACTACACCGGTTTGGACGCGTGATTCCTTTTCTTT
GGGATAACCTTTcggtggtggtggtggtccAATAATTGATGGTGAAGAAT
TATTTAGTTCAGTGTCTTGTTTTCTTTGTTCATTATCTTGTTTTTTGATG
AATGATCTACTTCTTATGTTTAGATTCTGGAGATTAGAATCTACTCGACT
TTTGACGTGGTTGTATCGGTTCGATCGTGCTCTGAAGGGTTGGCCGTTGC
TGTCTTTTGCATCCATGTCAGTATTCTGTCGTGCTATCCTCAAAGGACGT
TTTTCACTCGGATTCTCACNCCGTTCGTGTTGGTGATATTCAGATGCAGG
TCttctattttgaattttcggCAACTCATTACTGTCATCACCGAAGAATA
TGGGCTTGATTCTTCGATCAGTAGATGAAGTGAAATGTTCTGATATCGGT
CTGCTAGGAGGAAATCCTCTATTTTGAATGGGTGGGATAGGTTGGATAAG
AGGTTGACTAGTCGTTTGGTTATATTGTTGTTGCTGATGTTTTGTTAAAG
AGGGCATTGGTGGTCTACTGTTAGTTGGTATGAAAGTGTGAGTGAAAACT
TTCTCATCTTCATATTCCTTGATCTTATTCTCGAAGCTATCATCATCTGG
AAGTTTGGTTCGTTTTTTACTTAAGTAAGAACGATAAAGACGTATACTAT
CGTTAACTCCTTTATTGGAGTCAATCAATGTCGTTGATTTGTTGACGTAC
GTCGTAAAGTCTGTCGGTAGAAGTGATGACGTTGGTGCATCATTGGTGGA
AGCAGATCTTGACCGATATGGTAATGAATCACTTGGTATTGGAAGGTTTG
AAGGATCTTTTGGTGAAGTGTGTTGAACGTTCGGTGAAGCTGACATACTC
cggttattattattatttggtACTATCATCGTTTTTCGCCAAACTACACC
GGTTTGGACGCGTGATTCCTTTTCTTTGGGATAACCTTTcggtggtggtg
gtggtccAATAATTGATGGTGAAGAATTATTTAGTTCAGTGTCTTGTTTT
CTTTGTTCATTATCTTGTTTTTTGATGAATGATCTACTTCTTATGTTTAG
ATTCTGGAGATTAGAATCTACTCGACTTTTGACGTGGTTGTATCGGTTCG
ATCGTGCTCTGAAGGGTTGGCCGTTGCTGTCTTTTGCATCCATGTCAGTA
TTCTGTCGTGCTATCCTCAAAGGACGTCTATCACTCGGATTCTCATTCTG
AGATGGTTTACTGGGTACGGCGTTATTCGTTGAATTTTCGATGATCTTTT
GTTGGATAGAGTGCATTGTATAATTATCGAAATCATCGTAATTGACTATT
TCTCCATTTGATAGATTAATAGTTGAAGAATTGTTGAAGTAAGATGCTGG
TGTTTCAACAACGGATTGCATTTTTACACGATTGATGTTCTTCGTGTGTG
TCATTTACTGCCATTTAAATTTCGATGCAAACATCACTTTCCAATCACCC
AAAAAAGAAATAGTTCTTCGTAaaccaaaaatcttaaaaagtgaaaaatg
ttcTGTTTGTGTAGTGAACGAA
Run BLAST on NCBI

protein sequence of TCONS_00028441-protein

>TCONS_00028441-protein ID=TCONS_00028441-protein|Name=TCONS_00028441-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
MTHTKNINRVKMQSVVETPASYFNNSSTINLSNGEIVNYDDFDNYTMHSI
QQKIIENSTNNAVPSKPSQNENPSDRRPLRIARQNTDMDAKDSNGQPFRA
RSNRYNHVKSRVDSNLQNLNIRSRSFIKKQDNEQRKQDTELNNSSPSIIG
PPPPPKGYPKEKESRVQTGVVWRKTMIVPNNNNNRSMSASPNVQHTSPKD
PSNLPIPSDSLPYRSRSASTNDAPTSSLLPTDFTTYVNKSTTLIDSNKGV
NDSIRLYRSYLSKKRTKLPDDDSFENKIKEYEDEKVFTHTFIPTNSRPPM
PSLTKHQQQQYNQTTSQPLIQPIPPIQNRGFPPSRPISEHFTSSTDRRIK
PIFFGDDSNELPKIQNRRPASEYHQHERXENPSEKRPLRIARQNTDMDAK
DSNGQPFRARSNRYNHVKSRVDSNLQNLNIRSRSFIKKQDNEQRKQDTEL
NNSSPSIIGPPPPPKGYPKEKESRVQTGVVWRKTMIVPNNNNNRSMSASP
NVQHTSPKDPSNLPIPSDSLPYRSRSASTNDAPTSSLLPTDFTTYVNKST
TLIDSNKGVNDSIRLYRSYLSKKRTKLPDDDSFENKIKEYEDEKVFTHTF
IPTNSRPPMPSLTKHQQQQYNQTTSQPLIQPIPPIQNRGFPPSRPISEHF
TSSTDRRIKPIFFGDDSNELPKIQNRRPASEYHQHERYYHQDNPMNGYHQ
QNAARLSFSFPDPKPRSQIMVSENLQQNYKDTFDYLNKDYLKDNERRLSH
SLDSVQKKVDLSNSLSRQASMVLERLQLQQKQREQEQRTREQLLQQEXQL
LDHHHHRKVIPKKRNHASKPV
Run BLAST on NCBI

transcript from alignment at sc0000678:64505..69026

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028441 ID=TCONS_00028441|Name=TCONS_00028441|organism=Clytia hemisphaerica|type=transcript|length=4522bp|location=Sequence derived from alignment at sc0000678:64505..69026 (Clytia hemisphaerica)
TTCGTTCACTACACAAACAgaacatttttcactttttaagatttttggtt TACGAAGAACTATTTCTTTTTTGGGTGATTGGAAAGTGATGTTTGCATCG AAATTTAAATGGCAGTAAATGACACACACGAAGAACATCAATCGTGTAAA AATGCAATCCGTTGTTGAAACACCAGCATCTTACTTCAACAATTCTTCAA CTATTAATCTATCAAATGGAGAAATAGTCAATTACGATGATTTCGATAAT TATACAATGCACTCTATCCAACAAAAGATCATCGAAAATTCAACGAATAA CGCCGTACCCAGTAAACCATCTCAGAATGAGAATCCGAGTGATAGACGTC CTTTGAGGATAGCACGACAGAATACTGACATGGATGCAAAAGACAGCAAC GGCCAACCCTTCAGAGCACGATCGAACCGATACAACCACGTCAAAAGTCG AGTAGATTCTAATCTCCAGAATCTAAACATAAGAAGTAGATCATTCATCA AAAAACAAGATAATGAACAAAGAAAACAAGACACTGAACTAAATAATTCT TCACCATCAATTATTggaccaccaccaccaccgAAAGGTTATCCCAAAGA AAAGGAATCACGCGTCCAAACCGGTGTAGTTTGGCGAAAAACGATGATAG TaccaaataataataataaccgGAGTATGTCAGCTTCACCGAACGTTCAA CACACTTCACCAAAAGATCCTTCAAACCTTCCAATACCAAGTGATTCATT ACCATATCGGTCAAGATCTGCTTCCACCAATGATGCACCAACGTCATCAC TTCTACCGACAGACTTTACGACGTACGTCAACAAATCAACGACATTGATT GACTCCAATAAAGGAGTTAACGATAGTATACGTCTTTATCGTTCTTACTT AAGTAAAAAACGAACCAAACTTCCAGATGATGATAGCTTCGAGAATAAGA TCAAGGAATATGAAGATGAGAAAGTTTTCACTCACACTTTCATACCAACT AACAGTAGACCACCAATGCCCTCTTTAACAAAACATCAGCAACAACAATA TAACCAAACGACTAGTCAACCTCTTATCCAACCTATCCCACCCATTCAAA ATAGAGGATTTCCTCCTAGCAGACCGATATCAGAACATTTCACTTCATCT ACTGATCGAAGAATCAAGCCCATATTCTTCGGTGATGACAGTAATGAGTT GccgaaaattcaaaatagaaGACCTGCATCTGAATATCACCAACACGAAC GGNGTGAGAATCCGAGTGAAAAACGTCCTTTGAGGATAGCACGACAGAAT ACTGACATGGATGCAAAAGACAGCAACGGCCAACCCTTCAGAGCACGATC GAACCGATACAACCACGTCAAAAGTCGAGTAGATTCTAATCTCCAGAATC TAAACATAAGAAGTAGATCATTCATCAAAAAACAAGATAATGAACAAAGA AAACAAGACACTGAACTAAATAATTCTTCACCATCAATTATTggaccacc accaccaccgAAAGGTTATCCCAAAGAAAAGGAATCACGCGTCCAAACCG GTGTAGTTTGGCGAAAAACGATGATAGTaccaaataataataataaccgG AGTATGTCAGCTTCACCGAACGTTCAACACACTTCACCAAAAGATCCTTC AAACCTTCCAATACCAAGTGATTCATTACCATATCGGTCAAGATCTGCTT CCACCAATGATGCACCAACGTCATCACTTCTACCGACAGACTTTACGACG TACGTCAACAAATCAACGACATTGATTGACTCCAATAAAGGAGTTAACGA TAGTATACGTCTTTATCGTTCTTACTTAAGTAAAAAACGAACCAAACTTC CAGATGATGATAGCTTCGAGAATAAGATCAAGGAATATGAAGATGAGAAA GTTTTCACTCACACTTTCATACCAACTAACAGTAGACCACCAATGCCCTC TTTAACAAAACATCAGCAACAACAATATAACCAAACGACTAGTCAACCTC TTATCCAACCTATCCCACCCATTCAAAATAGAGGATTTCCTCCTAGCAGA CCGATATCAGAACATTTCACTTCATCTACTGATCGAAGAATCAAGCCCAT ATTCTTCGGTGATGACAGTAATGAGTTGccgaaaattcaaaatagaaGAC CTGCATCTGAATATCACCAACACGAACGGTACTATCATCAAGACAATCCA ATGAATGGTTACCATCAACAGAACGCTGCAAGACTCAGTTTCTCATTCCC AGATCCTAAACCACGTTCACAAATCATGGTATCTGAGAATTTACAACAGA ACTATAAAGATACTTTTGATTATCTCAATAAAGATTATCTTAAAGACAAC GAGAGAAGATTGTCGCATAGTTTGGATAGTGttcaaaagaaagttgattt aTCTAATTCATTGAGTCGTCAAGCAAGTATGGTATTAGAGAGACTGCAAC TACAACAAAAACAGCGAGAACAAGAGCAAAGAACCAGGGAACAACTTTTA CAACAGGAGCNTCAATTATTggaccaccaccaccaccgAAAGGTTATCCC AAAGAAAAGGAATCACGCGTCCAAACCGGTGTAGTTTGGCGAAAAACGAT GATAGTaccaaataataataataaccgGAGTATGTCAGCTTCACCGAACG TTCAACACACTTCACCAAAAGATCCTTCAAACCTTCCAATACCAAGTGAT TCATTACCATATCGGTCAAGATCTGCTTCCACCAATGATGCACCAACGTC ATCACTTCTACCGACAGACTTTACGACGTACGTCAACAAATCAACGACAT TGATTGACTCCAATAAAGGAGTTAACGATAGTATACGTCTTTATCGTTCT TACTTAAGTAAAAAACGAACCAAACTTCCAGATGATGATAGCTTCGAGAA TAAGATCAAGGAATATGAAGATGAGAAAGTTTTCACTCACACTTTCATAC CAACTAACAGTAGACCACCAATGCCCTCTTTAACAAAACATCAGCAACAA CAATATAACCAAACGACTAGTCAACCTCTTATCCAACCTATCCCACCCAT TCAAAATAGAGGATTTCCTCCTAGCAGACCGATATCAGAACATTTCACTT CATCTACTGATCGAAGAATCAAGCCCATATTCTTCGGTGATGACAGTAAT GAGTTGccgaaaattcaaaatagaaGACCTGCATCTGAATATCACCAACA CGAACGGTACTATCATCAAGACAATCCAATGAATGGTTACCATCAACAGA ACGCTGCAAGACTCAGTTTCTCATTCCCAGATCCTAAACCACGTTCACAA ATCATGGTATCTGAGAATTTACAACAGAACTATAAAGATACTTTTGATTA TCTCAATAAAGATTATCTTAAAGACAACGAGAGAAGATTGTCGCATAGTT TGGATAGTGttcaaaagaaagttgatttaTCTAATTCATTGAGTCGTCAA GCAAGTATGGTATTAGAGAGACTGCAACTACAACAAAAACAGCGAGAACA AGAGCAAAGAACCAGGGAACAACTTTTACAACAGGAGCAAATGAAGAGAG AACAACAGGAACAACAAAAAAGAGAACAGCTCTTACAGCAGCAAAAATTA AAGGATGAAGAAGATAAACGACAGAGACGATTACACGACGCTCAACAAAA TCTGAAAGAACAAAAACTATCAGAACATCAACGAATCGAAGAACAATATC GTCTTTACGAAGAACAGAAGCAGAGGGAGAAAGAACAGCtacaacaaaaa caaatgaaaatgttaGAACAACAAAAAGCTCGAGAAGAAGATCAAAGACA AAAACAAAAGCTTTTAAACGAAGAGCAACAGCATAAAGAACAACAAATAA AACTGGAAGATCAATATAGGTTATACGAACAACAAAGAACATTAAAGGAA CAAGAACAccagcaaaaacaaaaactacaAGAATACAATAGAACATTGCA GGACCAACGGATACATCAACAAAAAGCTTTCGATCCAAGTGAAAACATAC TTAGAAAAGCTGAATTAAGTTTAGCTGAGAATATACGTTTTCTACAGCAA CTTCAAACTCAAGCACTACCGCCAATATCAAAGTCTGCCAATAGTCAAGT TAAAGAGAATCCGCCTAATTCAAACTGGTCTTTACCAGATACGAGCAACA ACAATCTGAATACAATACAACCTGTGACGACAAAGAAATCAGCATTGAAA AAGACATCTAATTATTCTAGTTCAGTGCCTTACTTGAACTATGCAAATTC CTTTTTTAACAATCATATTGATCAAGGCTCATCAtctaaaaagaagaaga aatcagTACAAATTGCATTAGAACGAAATAGAATGCATTTTTATACGCCA GATTTCTAGTAGTTCATTCATTTATGTAGTATACTGAACAACACTTTGag taatttgaaagaaattgtgaatattttagttttatatattaattttcttc caaaaaattttttattgacaATAAAGAATATACCCAGAATCCTATAATAA CAAACTTGGCATAAGTGATACT

Coding sequence (CDS) from alignment at sc0000678:64505..69026

>TCONS_00028441 ID=TCONS_00028441|Name=TCONS_00028441|organism=Clytia hemisphaerica|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000678:64505..69026 (Clytia hemisphaerica)
ATGACACACACGAAGAACATCAATCGTGTAAAAATGCAATCCGTTGTTGA
AACACCAGCATCTTACTTCAACAATTCTTCAACTATTAATCTATCAAATG
GAGAAATAGTCAATTACGATGATTTCGATAATTATACAATGCACTCTATC
CAACAAAAGATCATCGAAAATTCAACGAATAACGCCGTACCCAGTAAACC
ATCTCAGAATGAGAATCCGAGTGATAGACGTCCTTTGAGGATAGCACGAC
AGAATACTGACATGGATGCAAAAGACAGCAACGGCCAACCCTTCAGAGCA
CGATCGAACCGATACAACCACGTCAAAAGTCGAGTAGATTCTAATCTCCA
GAATCTAAACATAAGAAGTAGATCATTCATCAAAAAACAAGATAATGAAC
AAAGAAAACAAGACACTGAACTAAATAATTCTTCACCATCAATTATTgga
ccaccaccaccaccgAAAGGTTATCCCAAAGAAAAGGAATCACGCGTCCA
AACCGGTGTAGTTTGGCGAAAAACGATGATAGTaccaaataataataata
accgGAGTATGTCAGCTTCACCGAACGTTCAACACACTTCACCAAAAGAT
CCTTCAAACCTTCCAATACCAAGTGATTCATTACCATATCGGTCAAGATC
TGCTTCCACCAATGATGCACCAACGTCATCACTTCTACCGACAGACTTTA
CGACGTACGTCAACAAATCAACGACATTGATTGACTCCAATAAAGGAGTT
AACGATAGTATACGTCTTTATCGTTCTTACTTAAGTAAAAAACGAACCAA
ACTTCCAGATGATGATAGCTTCGAGAATAAGATCAAGGAATATGAAGATG
AGAAAGTTTTCACTCACACTTTCATACCAACTAACAGTAGACCACCAATG
CCCTCTTTAACAAAACATCAGCAACAACAATATAACCAAACGACTAGTCA
ACCTCTTATCCAACCTATCCCACCCATTCAAAATAGAGGATTTCCTCCTA
GCAGACCGATATCAGAACATTTCACTTCATCTACTGATCGAAGAATCAAG
CCCATATTCTTCGGTGATGACAGTAATGAGTTGccgaaaattcaaaatag
aaGACCTGCATCTGAATATCACCAACACGAACGGNGTGAGAATCCGAGTG
AAAAACGTCCTTTGAGGATAGCACGACAGAATACTGACATGGATGCAAAA
GACAGCAACGGCCAACCCTTCAGAGCACGATCGAACCGATACAACCACGT
CAAAAGTCGAGTAGATTCTAATCTCCAGAATCTAAACATAAGAAGTAGAT
CATTCATCAAAAAACAAGATAATGAACAAAGAAAACAAGACACTGAACTA
AATAATTCTTCACCATCAATTATTggaccaccaccaccaccgAAAGGTTA
TCCCAAAGAAAAGGAATCACGCGTCCAAACCGGTGTAGTTTGGCGAAAAA
CGATGATAGTaccaaataataataataaccgGAGTATGTCAGCTTCACCG
AACGTTCAACACACTTCACCAAAAGATCCTTCAAACCTTCCAATACCAAG
TGATTCATTACCATATCGGTCAAGATCTGCTTCCACCAATGATGCACCAA
CGTCATCACTTCTACCGACAGACTTTACGACGTACGTCAACAAATCAACG
ACATTGATTGACTCCAATAAAGGAGTTAACGATAGTATACGTCTTTATCG
TTCTTACTTAAGTAAAAAACGAACCAAACTTCCAGATGATGATAGCTTCG
AGAATAAGATCAAGGAATATGAAGATGAGAAAGTTTTCACTCACACTTTC
ATACCAACTAACAGTAGACCACCAATGCCCTCTTTAACAAAACATCAGCA
ACAACAATATAACCAAACGACTAGTCAACCTCTTATCCAACCTATCCCAC
CCATTCAAAATAGAGGATTTCCTCCTAGCAGACCGATATCAGAACATTTC
ACTTCATCTACTGATCGAAGAATCAAGCCCATATTCTTCGGTGATGACAG
TAATGAGTTGccgaaaattcaaaatagaaGACCTGCATCTGAATATCACC
AACACGAACGGTACTATCATCAAGACAATCCAATGAATGGTTACCATCAA
CAGAACGCTGCAAGACTCAGTTTCTCATTCCCAGATCCTAAACCACGTTC
ACAAATCATGGTATCTGAGAATTTACAACAGAACTATAAAGATACTTTTG
ATTATCTCAATAAAGATTATCTTAAAGACAACGAGAGAAGATTGTCGCAT
AGTTTGGATAGTGttcaaaagaaagttgatttaTCTAATTCATTGAGTCG
TCAAGCAAGTATGGTATTAGAGAGACTGCAACTACAACAAAAACAGCGAG
AACAAGAGCAAAGAACCAGGGAACAACTTTTACAACAGGAGCNTCAATTA
TTggaccaccaccaccaccgAAAGGTTATCCCAAAGAAAAGGAATCACGC
GTCCAAACCGGTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016112XLOC_016112Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028441-proteinTCONS_00028441-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028441-exon-sc0000678-1491911889:64505..69026TCONS_00028441-exon-sc0000678-1491911889:64505..69026Clytia hemisphaericaexon
TCONS_00028441-exon-sc0000678-1510915933:64505..69026TCONS_00028441-exon-sc0000678-1510915933:64505..69026Clytia hemisphaericaexon
TCONS_00028441-exon-sc0000678-1575043694:64505..69026TCONS_00028441-exon-sc0000678-1575043694:64505..69026Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000678supercontigsc0000678:64505..69026 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0164515 0 0 0 0 0.0262973 0.169208 0.198014 0.166361 0.214651 0.17501 0.219133 1.16526 0.965834 0.252227 0.416042 0.327278 0.360766 3.10418 2.44309 0.644204 0.68663 0.462144 0.643096 0.6977 1.26113 0.2707 0.300936 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028441 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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