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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00064393-protein ID=TCONS_00064393-protein|Name=TCONS_00064393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=619bp
KIDLDSALHQLESASIINKRNTDNGIIVTIHSLIQATVLTLSKTNEIGYL
IKCLKAFFKEIDEEQKVRSIHHVDFAKEYFNHFFEILTTEVDDESFYEEM
IDYVNEIRDIAKVKRKSEAALTIIDRIITKCEFSNDFDCFHVKHNQALIL
KDLQRFTDAIKILEETLSSSKLGTIKMQYVLEVKTNLATFYRNIGNHKKS
LEMNEVVYKEKSELYGEHDKVTLFTMNNLMVNYSDVGDHEKAISWGEKVT
QSNNQVFGENDETTLITKFNLANKYSIIKKYSKAIELSTDVMNRRIYTLG
DNHEKTLNTKYLLAECYYMQNDYIKAIEIYTDVMNRRINTLGENHEETLN
TKYSLADCYYGQNNYIKAIELYTDVMNRRINTLGENHEKTLNTKYLLANC
YYEQKDYIKAIELYAYVMNRRIDILGKDHQLTLLVHSNIISLQSRDIKNA
EEFEDTLVEFEETLISGYGRMGHEDEDMIRAFLNLVSIYRNIDKIHEAIR
IQEIILSKQLDKDEIHKDLLCIMNNLANDYFQTNELNEAIALHQKVLENR
IKLYPEDPKGIVRTMINLAKDYEYNKDYLSAVSLLEEQMKWCDLIGGEHN
LSKRAKDILSRCKNKVASN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 307..340
e-value: 15.0
score: 13.4
coord: 391..424
e-value: 31.0
score: 10.6
coord: 349..382
e-value: 23.0
score: 11.7
coord: 520..553
e-value: 24.0
score: 11.6 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 391..429
e-value: 0.004
score: 16.9 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 519..587
e-value: 7.2E-10
score: 38.9
coord: 307..379
e-value: 4.5E-15
score: 55.6 |
| None | No IPR available | GENE3D | 1.20.1250.10 | | coord: 455..546
e-value: 5.4E-8
score: 32.2 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 7..183
e-value: 0.051
score: 13.4 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 473..591 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 136..286 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 475..499
coord: 302..420 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 280..363
e-value: 3.3E-14
score: 52.4
coord: 547..619
e-value: 5.0E-4
score: 19.8
coord: 184..206
e-value: 0.1
score: 12.4
coord: 207..279
e-value: 2.0E-10
score: 40.3
coord: 364..454
e-value: 1.2E-15
score: 57.1 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 307..424
score: 8.688 |
Blast
The following BLAST results are available for this feature:
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