TCONS_00049032-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049032-protein
Unique NameTCONS_00049032-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1044

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049032-protein ID=TCONS_00049032-protein|Name=TCONS_00049032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1044bp
TPETTSSIKPSQSTEDTGSSIPTTSSVDESATQSIKRAIKPSQSTEDTGS
SIPTTSSVDESATQSIKRAIKPSQSTEDTGSSIPTTSSVDESATQSIKRA
IKPSQSTEDTGSSIPTTSSVDESATQSIKRAIKPSQSTEDTGSSIPTTSS
VDESATQSIKRAIKPSQSTEDTGSSIPTTSSVDESATQSIKRAIKPSQST
EDTGSSIPTTSSVDESATQSIKRAIKPSQSTEDTGSSIPTTSSVDESATQ
SIKRAIKPSQSTEDTGSSIPTTSSVDESATQSINHSSQSTSGLESSNPIT
SSVDEPLTQSIDHSQSTTGPGTPTKSTALSTTSSVNESGSSSIHPSQSTV
SGFVTETISTAAIYETMTSSINGIASPSSSINPSDSSSSTVQSTVNSAGN
SLTVTSVIKSSQSLDASQTQSNVPSSTYSSMSTEPSMSTSFNPSQSVSQS
TTDLESSASQSENINPTISTKFPDVSSSIAQITSQPETTPEQPGAPGGPG
APGGPSKPGACDLDLGFIIDESGSVTRQDFATSINFVKEIAGNFDMSFDK
TRVSVITYSTDAVFHFKFNDRSGYVPAFFRDHMSELERRGGGTNTYKALN
MSRSEMFKPENGDRVDTMNVLIVLTDGQSLRREKLISEASSLRESGVKVL
AVGVGDKVGEDELNIIAGNSMNVFSVSDADSLNKYVKNMVKTSCDEQMLL
LECNPSGFKAGFSLTGLEDRNLPYSIRFSGNNTCGSINKTSEDHISDGRI
WMESNFTDCGIKAYYIGDSIAFEQTIVIDYGSKSLSSVVYRYLTSSHTVK
CFFDRRITQTLNINVQDVQEVAPSVNGTSDFEFDLKIMDTSNDENEVQLA
NIGEPLKFVLNLENAPDQVKTSPQNCYATKTDGTGRYNLIADRCAGADEA
TAVITSQSNELHSFSWELLAFRYFGESNAVVIVCEVLVCKNEPFLELSDE
CRRCGQTSNRRKRRDVGDVEDDVVIEKKTVLSKPFFIIDKREAQPTQNQA
QQDGFFDKPEGLTTVVALGAVITLMGGLLVKKVFFSTVAPSKMA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031142XLOC_031142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049032TCONS_00049032Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR001507ZP_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00453VWFADOMAINcoord: 513..530
score: 38.46
coord: 552..566
score: 28.59
coord: 620..628
score: 56.41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..513
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 513..668
e-value: 1.74483E-33
score: 127.023
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 512..694
e-value: 4.2E-33
score: 126.0
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 506..699
e-value: 1.1E-31
score: 109.8
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 514..686
e-value: 3.8E-32
score: 111.8
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 514..689
score: 28.99
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 499..696
IPR001507Zona pellucida domainSMARTSM00241zp_4coord: 702..957
e-value: 1.6E-6
score: 12.1
IPR001507Zona pellucida domainPROSITEPS51034ZP_2coord: 702..961
score: 20.445

Blast
[Close]
BLAST of TCONS_00049032-protein vs. Swiss-Prot (Human)
Match: COEA1 (Collagen alpha-1(XIV) chain OS=Homo sapiens GN=COL14A1 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 4.163e-17
Identity = 59/187 (31.55%), Postives = 101/187 (54.01%), Query Frame = 0 
Query:  514 DLGFIIDESGSVTRQDFATSINFVKEIAGNFDMSFDKTRVSVITYSTDAVFHFKFNDRSGYVPAFFRDHMSE----LERRGGGTNTYKALNMSRSEMFKPENGDRVDTMNVLIVLTDGQSLRREKLISEASSLRESGVKVLAVGVGDKVGEDELNIIAG--NSMNVFSVSDADSLNKYVKNMVKTSC 694
            D+  ++D S S+ R +F    +F++ +   FD+  +KTR+ +  YS D    +  N  S       +D + E    L  +GG T T  ALN      FKPE G R     + I++TDG+S  ++ +I  + +LRESGV++ A+GV      +EL  IA   +S +V++V++ D ++  V+++ +T C
Sbjct:  158 DIVILVDGSWSIGRFNFRLVRHFLENLVTAFDVGSEKTRIGLAQYSGDPRIEWHLNAFST------KDEVIEAVRNLPYKGGNTLTGLALNYIFENSFKPEAGSRTGVSKIGILITDGKS--QDDIIPPSRNLRESGVELFAIGV-KNADVNELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTLC 335
The following BLAST results are available for this feature:
BLAST of TCONS_00049032-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COEA14.163e-1731.55Collagen alpha-1(XIV) chain OS=Homo sapiens GN=COL... [more]
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