TCONS_00044433-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044433-protein
Unique NameTCONS_00044433-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044433-protein ID=TCONS_00044433-protein|Name=TCONS_00044433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
VITSTPSNPGKQRFHKRAPSVGQICNGCDTFHYITDLDEQDWSSVDPINK
KEVDPLVFQSFCSWMEDNCPLKDHQFLSIVHRDDVVPCLRFPNEDLSKAI
YKAAQSDTLAIEPIKSKPKKCALTSINGPCPYRVRTGDSDNWYPISGSCR
ARIVTVIDFLTFLRYIRQGIIKKDVNVLYWEMVKKRADINLARLGLENPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028065XLOC_028065Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044433TCONS_00044433Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00044433-protein vs. Swiss-Prot (Human)
Match: RAB3I (Rab-3A-interacting protein OS=Homo sapiens GN=RAB3IP PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.701e-37
Identity = 78/227 (34.36%), Postives = 125/227 (55.07%), Query Frame = 0 
Query:    1 VITSTPSNP-------GKQRF---HKRAPSVGQICNGCDTFHYITDLDEQDWSSVDPINK--KEVDPLVFQSFCSW-----MEDNCPLKDHQFLSIVHRDDVVPCLRFPNEDLSKAIYKAAQSDTLAIEPIK--------------SKPKKCALTSINGPCPYRVRTGDSDNWYPISGSCRARIVTVIDFLTFLRYIRQGIIK-KDVNVLYWEMVKKRADINLARLG 195
            V++S+P++P       GK  F   H R  S     +G            QD S + PI K  KE D  ++  F  W     M+  CP     FL  ++++D+ PCL F   +L+ A+ +A +++TL+IEP+                 PKKCALT  +  C +R++ GDS N+Y IS  CR RI +V +F T++RYI+QG++K +DV+ ++WE+++ R +++LA+LG
Sbjct:  259 VLSSSPTSPTQEPLPGGKTPFKKGHTRNKSTSSAMSG----------SHQDLSVIQPIVKDCKEADLSLYNEFRLWKDEPTMDRTCP-----FLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYIQQGLVKQQDVDQMFWEVMQLRKEMSLAKLG 470
The following BLAST results are available for this feature:
BLAST of TCONS_00044433-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB3I9.701e-3734.36Rab-3A-interacting protein OS=Homo sapiens GN=RAB3... [more]
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