TCONS_00043980-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043980-protein
Unique NameTCONS_00043980-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043980-protein ID=TCONS_00043980-protein|Name=TCONS_00043980-protein|organism=Clytia hemisphaerica|type=polypeptide|length=141bp
XTIFSYGQTGAGKTFTMTGTTNNFQQRGIIPRAINQLFSEIKEKYENDIT
VRVSYLEIYNEQMFDLLSTMYGGGKEANLSFAEDNDGVTYVKGLACYVAK
TEEEALNYLFEVRKAIFFSQTINKYGIFISSKCIDIHSDLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027640XLOC_027640Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043980TCONS_00043980Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 1..140
e-value: 0.0017
score: -168.6
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 1..124
e-value: 3.8E-35
score: 121.0
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 2..117
e-value: 4.5E-30
score: 104.6
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 1..141
score: 33.462
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..121

Blast
[Close]
BLAST of TCONS_00043980-protein vs. Swiss-Prot (Human)
Match: KIF9 (Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 PE=1 SV=4)

HSP 1 Score: 123.635 bits (309), Expect = 1.172e-33
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0 
Query:    2 TIFSYGQTGAGKTFTMTGTTNNFQQRGIIPRAINQLFSEIKEKYENDITVRVSYLEIYNEQMFDLLSTM-YGGGKEANLSFAEDNDGVTYVKGLACYVAKTEEEALNYLFEVR-KAIFFSQTINKYGIFISSKCI 134
            TI  YGQTGAGKT+TM G T N++ RGI+PRA+ Q+F  I+E+  + ITVRVSYLEIYNE +FDLLST+ Y G     ++  E+  GV ++KGL+ ++   EE+A + LFE     I  S T+NK      S CI
Sbjct:   88 TIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENPQGV-FIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNS--SRSHCI 219
The following BLAST results are available for this feature:
BLAST of TCONS_00043980-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF91.172e-3349.63Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 ... [more]
back to top