TCONS_00040109-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00040109-protein
Unique Name	TCONS_00040109-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	753

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00040109-protein ID=TCONS_00040109-protein|Name=TCONS_00040109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=753bp
KLTALFSDYAFLWTQDINTVFKEFLAGNLRCRPQASDANDGESIEMADGR
DTRASMQSRSSSVKFITKDISMTGSRKSHSANTTSSGVTSGITRLRDKRF
LKSAQNKGKEQPNIDDFDHEISVFKEAKEEVGRADIAHSIGWVRINMQPI
KETIETYASKWLYTYTKYLSDQVHLMLNSLDSFLKRTEPGIEAITGEESD
VASFMKLMRIFNEVNRQQSELDNNFIKMKDMLEVLDKYNQKLPAKTQAFY
EAAPVRWNNLKMKVSQAKKKLGPRIQAKHKDVAEVLSQFKTQCQELRYEI
EDSNVYSRSIEMSMAYTLIDQFGKEVELLEAESHDLVELQELLEKEIFDF
NLIKTLKNELALLQQIWDINKVIKDQQTEWKRHRWQRIKTKLLKRGLDAQ
YDLVMKLSDRVHSWDVTLCLEETINEFMSCIPIMEDLGKAALRSRHWKQL
ARSMGTSVIMTTEVLNRMTLDEFLKLGLQNHSDEVRSIVKRSSKDVHIEN
MLKLYEEIWLSKVFETKRHSRLIANSNGGYVGNEAGSVSGSEYGPAESEF
GYNTSTGQNSALPPHASPSQAKRTRSRMMSVTSIAHSSLAMSTMDEDPDR
YLLDNPDAILHELRAHQVSLQEVLGHSSATAFLDEISKWQKTLQNIETFI
LHLNDAQEIWIQLDEVYNSVDIRLTMGKESAIFANASKEFIGIMKNINKN
PNILQISSAPGIIYKLEKIHLTLVKSSVALSKHTDKRRNKNPHFFMLSRE
ETY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_024325	XLOC_024325	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00040109	TCONS_00040109	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013602	Dynein_heavy_dom-2

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 326..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 541..577
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..62
IPR013602	Dynein heavy chain, domain-2	PFAM	PF08393	DHC_N2	coord: 354..520 e-value: 1.2E-26 score: 93.6 coord: 591..751 e-value: 8.1E-27 score: 94.2

Blast

[Close]

BLAST of TCONS_00040109-protein vs. Swiss-Prot (Human)
Match: DYH9 (Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 5.403e-34
Identity = 101/411 (24.57%), Postives = 194/411 (47.20%), Query Frame = 0

Query:  112 PNIDDFDHEISVFKEAKEEVGRAD-IAHSIGWVRINMQPIKETIETYASKWLYTYTKYLSDQVHLMLNSLDSFLKRTEPGIEAITGEESDVASFMKLMRIFNEVNRQQSELDNNFIKMKDMLEVLDKYNQKLPAKTQAFYEAAPVRWNNLKMKVSQAKKKLGPRIQAKHKDVAEVLSQFKTQCQELRYEIEDSNVYSRSIEMSMAYTLIDQFGKEVELLEAESHDLVELQELLEKEIFDFNLIKTLKNELALLQQIWDINKVIKDQQTEWKRHRWQRIKTKLLKRGLDAQYDLVMKLSDRVHSWDVTLCLEETINEFMSCIPIMEDLGKAALRSRHWKQLARSMGTSVIMTTEVLNRMTLDEFLKLGLQNHSDEVRSIVKRSSKDVHIENMLKLYEEIWLSKVFETKRHSR 521
            P +  F  +I  ++   EEV R + I    GW++I+++P K ++     +W   + ++L D V   L +LD+F+K++E G+     E+ D    +++M     V  +QS  D  F  +K  +E+L  Y Q+LP       E  P +WNN+K      K+++ P    +   + +  + F  + Q+   +      +    +    + ++D    E++ +E+    + E   L E  + D+  ++  + E+  L+++WD   ++      W+   W+ I  + ++         +  L   V +WD    LE T+   +S +  + +L   A+R RHW+QL ++ G S  M  +     TL   L+L L ++ DEVR IV +++K++ +E  LK  +  W    F+ + H R
Sbjct: 1053 PLLSQFKVQIDSYETLYEEVCRLEPIKVFDGWMKIDIRPFKASLLNIIKRWSLLFKQHLVDHVTHSLANLDAFIKKSESGLLKKV-EKGDFQGLVEIMGHLMAVKERQSNTDEMFEPLKQTIELLKTYEQELPETVFKQLEELPEKWNNIKKVAITVKQQVAPLQANEVTLLRQRCTAFDAEQQQFWEQFHKEAPF--RFDSIHPHQMLDARHIEIQQMESTMASISESASLFEVNVPDYKQLRQCRKEVCQLKELWDTIGMVTSSIHAWETTPWRNINVEAMELECKQFARHIRNLDKEVRAWDAFTGLESTVWNTLSSLRAVAELQNPAIRERHWRQLMQATGVSFTMDQDT----TLAHLLQLQLHHYEDEVRGIVDKAAKEMGMEKTLKELQTTWAGMEFQYEPHPR 1456

The following BLAST results are available for this feature:

BLAST of TCONS_00040109-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00040109-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH9	5.403e-34	24.57	Dynein heavy chain 9, axonemal OS=Homo sapiens GN=...	[more]

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TCONS_00040109-protein (polypeptide) - C. hemisphaerica