TCONS_00034863-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00034863-protein
Unique NameTCONS_00034863-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00034863-protein ID=TCONS_00034863-protein|Name=TCONS_00034863-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MAKRIFILVILIIQIANISSSIKGCINNGTVFSCIGSNLTSDDLPSIFGN
LPPNLTTLIFDENNITNINLMGETSKNFFNLTKISLRLNKITKFPENLQS
IFPNLEVLELSGNHIESLDLIKIPTLRELYLDSNRLEYLTNNTFAHLNGL
SILSLERNDIQFITANAFYNLTSLKYISLAGNKIADLHSGLFDSFRTNDG
IIVNLSSNIIQSIPYNLFTFESVRNIDLSGNEIWNIKNDAFLELIAVDGS
INLENNILKMVPLFPELPSGIIKLEGNPLICNCDLFARTKAQGEITFNGT
CQHPEEERGRNINDVKSNICTYCDLHKPCQNKGHCIDYPGNFFYKCICEK
PYYGQRCEEFDHDWRNCTNITCPVHSECIEIRAYNYECQCVDGFKGNPCV
PVHTDENSRMSFYITIGLAMLGGIVLIFCFVCCCMKRYRKHESYMVVPSE
RTNIGEAEDSKYGGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020281XLOC_020281Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00034863TCONS_00034863Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000742EGF-like_dom
IPR032675L_dom-like
IPR001611Leu-rich_rpt
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 123..146
e-value: 0.29
score: 20.2
coord: 220..243
e-value: 77.0
score: 6.0
coord: 171..194
e-value: 0.028
score: 23.6
coord: 147..170
e-value: 5.0
score: 15.7
coord: 102..122
e-value: 88.0
score: 5.5
coord: 78..100
e-value: 230.0
score: 2.0
IPR000742EGF-like domainSMARTSM00181egf_5coord: 366..400
e-value: 1.8
score: 17.5
coord: 322..358
e-value: 0.071
score: 22.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 363..400
score: 10.919
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 321..358
score: 13.333
NoneNo IPR availableGENE3D2.10.25.10coord: 363..406
e-value: 0.014
score: 15.1
NoneNo IPR availableGENE3D2.10.25.10coord: 329..362
e-value: 4.4E-7
score: 29.3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..34
score: 6.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 323..358
e-value: 3.92085E-6
score: 43.009
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 322..360
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 202..328
e-value: 5.0E-8
score: 31.5
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 17..130
e-value: 1.7E-14
score: 52.8
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 131..198
e-value: 5.0E-13
score: 48.0
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 22..286
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 124..184
e-value: 8.2E-14
score: 51.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 80..101
score: 6.01
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 54..74
score: 6.087
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 125..146
score: 6.611
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 173..194
score: 6.18
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 222..243
score: 7.08
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 104..124
score: 7.504
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 149..170
score: 5.433
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 388..399
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 388..399
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 346..357
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 346..357

Blast
[Close]
BLAST of TCONS_00034863-protein vs. Swiss-Prot (Human)
Match: LRC15 (Leucine-rich repeat-containing protein 15 OS=Homo sapiens GN=LRRC15 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 7.045e-17
Identity = 116/454 (25.55%), Postives = 176/454 (38.77%), Query Frame = 0 
Query:   35 IGSNLTSDDLPSIFGNLPPNLTTLIFDENNITNI------------------NLMGETSKNFF----NLTKISLRLNKITKFPENLQSIFPNLEVLELSGNHIESLD---LIKIPTLRELYLDSNRLEYLTNNTFAHLNGLSILSLERNDIQFITANAFYNLTSLKYISLAGNKIADLHSGLFDSFRTNDGIIVNLSSNIIQSIPYNLFTFESVRNIDLSGNEIWNIKNDAFLELIAVDG--SINLENNILKMVPL--FPELPSGI-IKLEGNPLICNCD-------LFARTKAQGEITFNGTCQHPEEERGRNINDVKSNICTYCDLHKPCQNKGHCIDYPGNFFYKCICEKPYYGQRCEEFDHDWRNCTNITCPVHSECIEIRAYNYECQCVDGFKGNPCVPVHTDENSRMSF-YITIGLAMLGGIVLIFCFVCCCMKRYRKHESYMVVPSE 450
            +G N  +   P +F +L  NL  L   EN +T+I                  N +G  S   F    NL ++ L  N I++ P ++    P L  L L GN ++ L       +P LREL+L  N +  L +N F++L  L +L L RN I FI+  AF  LT L+ +SL  N + DL           DG +  + +N+              +NI L  N +  +  + F     V+G  +I L+NN L+ +PL  F  L     ++L  NP  C+ D       L       G  T    C  P   RG+++  +  N+        P  +      YP   +Y    + P Y            + T +T PV            + + V G          T   S ++   I IG+  L   +      CCC KR +     M  P+E
Sbjct:  180 LGKNSLTHISPRVFQHLG-NLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDL-----------DGNVFRMLANL--------------QNISLQNNRLRQLPGNIFAN---VNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTV-PVCFSPANVRGQSLIIINVNVAV------PSVHVPEVPSYPETPWYP---DTPSYPDTTSV-----SSTTELTSPVEDYTDLTTIQVTDDRSVWGM---------TQAQSGLAIAAIVIGIVALACSLAACVGCCCCKKRSQAVLMQMKAPNE 580
The following BLAST results are available for this feature:
BLAST of TCONS_00034863-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRC157.045e-1725.55Leucine-rich repeat-containing protein 15 OS=Homo ... [more]
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