TCONS_00027312 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027312
Unique NameTCONS_00027312
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2332

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027312 ID=TCONS_00027312|Name=TCONS_00027312|organism=Clytia hemisphaerica|type=transcript|length=2332bp
CCTGGAGATCATAAACAAATCACAGCGAAAAATGATACTGGATTTAGCAG
TTTAGAGGCACCCTGAAGCTTTAACCATTCACTTCTATTGACATTGAATA
TCagGGTaagttaaattctttttttactaaTTAATACATAAAATCCACCA
TGAGGGATAATGCACTTCCATACCATAACACTAAACGTCCCATCATTATG
GCAATGTTCAGTGGCCCTGGACCCGCCTGCGTCGGTCGACTTGGTCTTGA
CAATGGGCCTAAATATTCATTTGGTTTGAAACCTGGTCAGCGGGTAGATG
CTTTCACTCCTGGTCCTGCTGCATACACAGTTCATGATAAGTCAACACGG
TTTGGTAGTGATGGTTCCCCTAAATACACACTTCACTCACGCACGAAACA
AGGAAACTCCTTCACCACTCCGGGACCAGCTGCCTATTCAACAGAAAAAG
TAAAGATATTCAAGCAACCAACACCACCCAGTTATTCATTCGGATCAAGA
ACTCGTTTCAATAAACGTGATGGGTCACCGGCACCTAATGCTTATACCGT
ACCTCCCATTTTCGGCTCCAAAACGCCCACTAAACGTTCGGCACCCGCTT
ATGTAATGACGGGTCGAGGGCGTGTGGGTGGATTCAGTGAAGACTTGAGT
AAGACACCTGGGCCGGGGACTTATAAAGTGAACGATCCAAATTCATGGAA
ACATCGGGCGCCAAGCTACTCAATCAGTGGTCGATTTATGATGCCTGGTG
ATTCAACACAAAAGCCTGGACCTGCGCATTACAGTCCTCATAAGCAAAGA
TCCGGAACTGGTCCATCTTTTGGTGTACGGCATTCAGAATATACCGCACC
TGTTCTTTTCTCTACATGCTGATTGGTTGTCGCCTGCAATTTGATtggat
ttgaaaatgttttatctGCAAGCTGATTGGTTAAAGATGTTGACAATGCg
aactgattggttgaaaatatTAACTATGCAAGCTGATTGGTTAAAGATGT
TGACAATGCgaactgattggttgaaaatatTAACTATGCAAGCTGATTGG
TTTGTTTAAAGTGTTATTTGTGGATGGGAAGTTCTGATTAAATTACATTC
CAGAGATAAATTGAAGTGTGCTTTCATGGTTCTTTGTTGTGTGCTTTTTa
gtttgattttaaataaaTAGTTTTTATCCACTCTGTCTTAGTAATATACT
AATTCATAGATACTTTGATTAACTGCTCTGTTCTTTTGTGCTTACTTGTA
GTGGAAGGGGCTATACTGGATTTTTTATGCTGTTACTCattccccagctg
gcacacaacgtcttGTACACGCTGGGTCTGAAACAGTTTAAATATTTGAC
GAATCGAAAGCGAAAGTATAACTTTAGAAATAACTTTCTTTTTCCGCAAT
CCCTTATTCCTAGTTCCTTATGACCCTTCCCTCACTACACTCAAGCACCA
GAGATCTCCATGTAGGGTAAGTATATCTTTTACTTTCGACTATTTTTTCT
TGTCTtgtattattattttgttattctttatctaaaatcaaattttacag
GAAGGCTTTACTCCaaattttataatctttttctGTAACATATACAactc
aaatttttttaacaaattattttatttttaagtgatttatatattttttt
cttcttaacaaatttatatacacgttttttttattagaacccagtttata
agaacattgaggctgaaattcgtcgaaaaattaataacatcgtaagaaca
tgcccagcctcagtttggaaaaaaatgacgagAAACTACAATTCTAACTG
AACTTAGAGATGAATTTCCTAAAACCGAAAGTCAagtattgtccaaattt
taccaattttaagtgctctttattttgcatgatattgtcgatttacagta
gtctgaaaaattaagaacgcatttaagaacattttaggctgaaaattgct
aaaaaaataagcacatccaggctcagccaaNaaattaagaacgcatttaa
gaacattttaggctgaaaattgctaaaaaagtaagcacatccaggctcag
ccaaattttaggtgttctgataaaaaaaacaacgtgtaccTACTATTTTA
TTTCACCTAATTATTTCTTTTATGGGCGTGGTCCCTCATGTAcgcttttc
aattatttttgaacTTTCTTCTTAAAGCTGCGTAATTTGAATTCAAGTCT
TTTTTTtatgtattattttttctaaaatttattttattttgttgatgGTA
TTGTAAAAAGAAACCTACATagtatgaattttgaaaattacggTGAATGC
TTACATTATAATAAAAACTTGTCGAAATTTCC
Run BLAST on NCBI

transcript from alignment at sc0000616:64106..76357+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027312 ID=TCONS_00027312|Name=TCONS_00027312|organism=Clytia hemisphaerica|type=transcript|length=12252bp|location=Sequence derived from alignment at sc0000616:64106..76357+ (Clytia hemisphaerica)
CCTGGAGATCATAAACAAATCACAGCGAAAAATGATACTGGATTTAGCAG
TTTAGAGGCACCCTGAAGCTTTAACCATTCACTTCTATTGACATTGAATA
TCaggtaatttattgaatattttgatcCATGATGCTAATGAAATCCtaat
taaatcaatttttgtttgggatttcttttttgaaggaaattatCAAGACA
AGAGCTCAAGGGCAGAATTTATTTACATGCCTACTGCACTGCACTGTACA
ACAACAgtaaaaacgaaaattttttttttaacgtagctcatttttaaatg
tacattTCCAGGATATACtatttacagaaaaaatataTCTATCCATCTAT
CTTGTTGTGAGCAGTCAGTCACAGGGTCTCCTTggtctttttttataata
taaatatatatttgttcggatagaataaaaacatacctgatcaacacaac
caatcCAAACCTTCCagtcaagaacaagtgcaaattaggaAACCTGTCGG
CAATCTCTCCTACTTAGGAGAGTTGTATCCTAATTTGGAGATTTAGGTAT
CCTAAATTAGGGtggtcaggccaaaattttcccctcaaattttgaaaacc
aaactaattttatttgaaagtccttacctttgtgagaaaaatgaggggtc
atttgttaaaattggttaagtagttccaaagttattccattttcaaacca
caaaaaaaccaccttttcaaagaatcgcctcactaacaccacgccagcaa
gaaataattttcggaagcaccaaaatcgcgccaaaaatggcggatgaaat
ctagtcttccgtgtggcggggcgTGAGGGGNNNNNNNNNNNNNNNNNNNN
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GTGGGTTCCTCGAAAATTAACATCCTTAATAATCTGCCGTTCAGAGCCTA
AAATTTTGCGAACACGagctaaagatttgtttttctttttacggaACAGC
CCGATACGGTCTGATTTTCTCGCAAAAAAAGCGTTCGTGTATGCTAGTTA
GCACATTTGAGTGGTGTTTTGGGCTATAGTTTTGCATTCCGCCAGCCAAA
CTCGATGAAATTCAGTACACAATCTCATTTGCTTATTATTTACATCTTGG
AAGTGGTAAGATGGCGCGGATGTCTCTGGTTGGTGGAAAATACgggtttt
ttggtttttagtatcctaccgtgagaggtcctaaagccgacacccttgcc
taattccgaccccccaaataactgttatgaaaaaaaattctatgtttaca
aacattccctctccaagttgaactaatgttagaactctcgaaacaaaaca
tctaacaagatagctgtaatgtcaagatgtcaattaatgtaattaaaaag
tgtgagttgtaaaaataattaccttttaccCAGAGTTGCTCAtatttaaa
acgataacagaacagttttgtaataaaatgacttgtgcgggaaaaatacg
aaacaacttgggctggtttccatcaagaaacaaacgggtaaattgcaaaa
atggtgcgaatttgaaaaaagggcggatgcggtagcacttaatttgaata
acaaacattgaatcaatgagcggcaactatcaacgccctctttacttTAC
CACCCATAATTCcagatgtttatttacggaaggcccgcaaccaagccaag
tgccagtgtaaagtaataaaaaccaggcttgattacgtaacgtttcaaaa
tgaccacgctcgtacacagacctcttttatattttcgtgtgctttgggaa
atcaaaacatctcattactttttatgatgctgttactatatactgttgtc
atttatgacgttgtgcatattgcaataaaaaaatatgttttgttataaga
agcaattattgttatttggttcgattggttcagtgtatcaaatctctNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgttgcgtcaca
gcgaaaggtttgtttttattttagtttgtatctttgaaagaccccatcgg
atttaggcagtggtgtcggctttaggacctctcacggtaattaggatgtt
gattgctattttggatacttttttgtATCCAATTTAAGATACTCTCCTAA
GTAGGAGAAATTGCATaaggtatcctaatttgcacttgttcttgactgcc
ttctgtcttgcgtttttactctttccttcccaacaactttcgtttttgct
tatgtaggtcttaaaatccacaagtaatgaacctattatcttatagcttt
atctgaataaatctggttgaaaaccttctttcatgtttcattccgtacgt
tttttatccacgtggtgaaccggtttccctgATTTCCCgctaattaaaaa
tttgaaactttcccgtgggcgcgattgCGCCATCGCataatatttttcgt
gaaaatttaccgtattctaacgctaatataatctagataggaaaaaaata
ttaaatttaattctttttttgttcgtatttctaaatttcacgataaaaag
gactatttacaaattattttctttaacgggcgttgaatcggcattgacat
atttaatgatgtcataatcaatattttgtcaacatccttttcatttgATA
AATACCACTAAGATATACAAGagaagtaaacataaatttatcgcctgcaa
gcacggcttagctaagcgcacctctcttattcattgtCTAAGAATTGGAA
CGGGCAAAGATTACGGCGcgggctgatagcggacaaaggttatttgaaga
tattttcagttataatccaaggtagaacaaactaaacatagaaagggggt
attttttagtgctctatacggtgatcggtattttttttgaattctatgtt
tagatttttctacccagccccgttgctatgtacgcaCGCCCTGTTGCTAC
AACGTTTGTTTGAAATAATTTAGCACACACTGNtaaattctatgtttaga
tttttctacccagccccctTGCTATGTATGCACGctctgttgctaagacc
ttttcttgaaaatgaaagtgaaaccaaaataatttagcgcgCACTGCCGT
TCGAGTAATATTGATAAAGTGAAAGGAGGTCCTGACTGGTTGTGAGACGT
GCGGAAATTAGCAAAACGCCCGTGTCCGTCCTATACGCAATAATAGATAA
TAGAGTCAAGTTACCAATGCACAAACGACCCCAGTGCACGAACAAAcgtc
tttgaacttgaaaaaaaacaaccaaaaacaaacttctatagaatttcctt
tgtgcagcagaatcctcTCAAACTATCCCTGCCCCTGCCTTAAACTGTCC
AGAAATTAAAGTAAACGGAGTactagaacaacaccaaaccaattttgaac
gaggccaagtaaaaaaatcacgaaattcaggatttttgtaaacatggctG
ATTGCAAAAGGAAATGTTTTATATACCATACCGTCAAGTGAtgttctaac
ttgggactatctgacaaaacatgggaagtcatttgatttgagttaatgaa
tggcgtattaaaaaataaacaatttttcttttgcaccaagtaggctttta
aatcgaaatatgaaaaatatccgtagtggaacacacgcaagTGTCTGTGA
AGTAACTCGCGCGGTAAGTTACACACTCGTCATTCGTTAATCCCATCAAG
CGATAGGCGAAggtgtccggtcattttgaatgaaaacaaaaaagttaaaa
agggcgccctatcagtgaaagttatcgtgacatgctaccgtcaactgctc
caacttgggactatctgacaaaacatagGACGGCAATTccgccaccattt
caccgaacctccaaagtcatttgatttgagttaaggaacggcgtattaaa
gaatacacgatttctctttcgattttacagtaagtgaaaatacagaccag
atatgcaacagtcccatgttttgaccgtcaattgtcccaagttagagcag
ttgacagtatgacagaaagtatgattgataaacttgataGATAGAcagtg
atgcaagttacccaatttcACGGTAGTTATTCAAAAGATGCGTTCtctga
cacccttttttagagctgaaaataatagaaagatCAACGTAGATAGAATG
TTAAAAAGATGTTATAACGATGTTGGTTTCAGTATGCTACAGTTAAACGA
ATTTGTTTAATAATTATCTATATACAGCttcatattcttttttttttcgt
aaaaaaGGATATGAAGATGCGTTttctgacacccttttttagagctgaaa
ataatagaaagatCAACGTAGATAGAATGTTAAAAAGATGTTATAACAAT
GTTGGTTTCAGTATGCTACAGTTAAACGAATTTGTTTAATAATTATCTAT
ATACAGCttcatattctttttttttcgtacAAAAAAGTGAGGTCTCTGTG
ATTTGATATGGATGTACAtttcttgagaaattctttaGAGGTCTTTAAGG
TAGGATTCCTTGTTATCAAATTGAACAATGACACGTTTTTGTAACCTTCT
ATTTCAAAGATTCATGCTCAAGCGACTCAAGttgtaccgtgagatcgggt
aacttacatcagtggaggctaacatgcatggccctcaaatgaatgacctg
actggtcattaaaatacaaagttgaatcaaaacaaaaatggtagagtaga
gctgcgagcagagctgcgcagttcatttgttttgaaattttgctgctttg
attggtcagtcatttgatggctatgcaagtttccctccagtgatgcaagt
tacctgacttcacagTAAATATTTCATGATAGAAAAAAgatgtctgaaat
tttggaGCAGCTTTATTTCAAGTTTGAGATAGGGATATTAAATCCGTTAA
ACTACAATTGTCAGTTACTTGAATGGTTGTCTTTTTCCATTTACTGGAAT
GGTTTCATCTTTCCATCCTATGAGATATTTTATTTGTGGTGTCAGCATTC
AGTCCATTTCCCTGCActgaaatttaaacaaaaagcTAAGTGTAAAAAca
acaattaaaaaatattataattcaCACCTTCTGCCATTATGATCTTTTTA
ATGTCACTTGTAATTTGAAATTGGAAAGTAATTGTGTTAATATACACTAT
ACATGTTATTTAATTGTTTGTTAATTTGGTGTGGGAATTACTGTCtcata
atgaaaaaaaaagaattttatctACTTATGTcacatgttttttttcatta
aatttggaATTGATGGCAAGGATGTTTCATGTCTTCCAACATTTTGGTCA
TTGTTTAACCATGGTATATTTTATATGTATTTTATATCCTTATGCTCATG
CAAATTCATTGTGGATTTACAAAGANCCATGGTATATTTTATATGTATTT
TATATCCTTATGCTCATGCAAATTCATTGTAGATTTACAAAGAGACTGGG
TTCACAGAATTTATTTCAAacaaaaccaaaatattttggaaatacATCCA
CCTTCTCTTGTACCAAAAACTGTATGAAATAAGCAGGGATTGAGTTTATT
AGGGTGTCTAATGTGAATTGATACATATTCacataccttattacacttat
aaCTACCTAAGttatttgtactagtaatctcatggttatgaggAGTATTT
AGGATAAGATTCCTGaggtcacttttgaaatttaaaatatttcgaaattt
gactgagggtaatttatccagaatttcacgaaaacaagcatgagattcct
ggttaatctcttggtttggattgaaattctgaCAATTCTGAAAGACATTA
AAACACTGGAGATCAATCTGNgaaattctaacaattttgAAAGACGTCAA
AACACTGGAGATCAATctgaaacttaaaaaaaagagGTCTCCAAAAAGTC
ATACAAAGGCGATTCGAGTTTTAATTGGGTAATATTCCATTTACTTAGTC
TTAAGCCttcgaagttagtaagaaattcgaaaaaggCGATGAATTTCCAA
AGGATGGGAATTTCACTTTTgtgggaaattacaaaatttaggagggaaat
tacaagtttgtgggaaattacaaattaacgtaagcaaaaacgtcgatcaa
atttcaatcaaccatgagattataaCGCTAATTGGCTACCCTCTGCCTTT
TGCGTTAATTAATTGTTGCACTCATTTTTTTCTGCATTTAACTCTTGATT
TATAATATAAGTGTAATAAGTTATACTCGCTTTTGGCTCTGGTAAACTCA
GAACTCATAACCCATCCCATTATTGggtaattttatttctttattgtGGC
AcatcttttttcatttagagtttAAATTTTATCTTTCAGGGTaagttaaa
ttctttttttactaaTTAATACATAAAATCCACCATGAGGGATAATGCAC
TTCCATACCATAACACTAAACGTCCCATCATTATGGCAATGTTCAGTGGC
CCTGGACCCGCCTGCGTCGGTCGACTTGGTCTTGACAATGGGCCTAAATA
TTCATTTGGTTTGAAACCTGGTCAGCGGGTAGATGCTTTCACTCCTGGTC
CTGCTGCATACACAGTTCATGATAAGTCAACACGGTTTGGTAGTGATGGT
TCCCCTAAATACACACTTCACTCACGCACGAAACAAGGAAACTCCTTCAC
CACTCCGGGACCAGgtaaaataaacaattttctACAAAacttttacaaga
atttttcatCTCAAGCTGAGTAAATACTAAATGCCTGAACGGAAAGAATC
TTAATGTACAACCTTATACTAATTTGTAGCTTACGTACTTCGATCAAATA
ATCCATTTTAAACTAATTTTTTAAGTGCGTttcctaaatttcttttgaac
TGATCGTTTTGGTAATAAACTTTATTTCCTATTCATATCATTATAGCTGC
CTATTCAACAGAAAAAGTAAAGATATTCAAGCAACCAACACCACCCAGTT
ATTCATTCGGATCAAGAACTCGTTTCAATAAACGTGATGGGTCACCGGCA
CCTAATGCTTATACCGTACCTCCCATTTTCGGCTCCAAAACGCCCACTAA
ACGTTCGGCACCCGCTTATGTAATGACGGGTCGAGGGCGTGTGGGTGGAT
TCAGTGAAGACTTGAGTAAGGTCAGACATCTTTGCTTATTCTTTAACCTA
CAAAGCAGNCGGATCAAGAACTCGTTTCAATAAACGTGATGGGTCACCGG
CACCTAATGCTTATACCGTACCTCCCATTTTCGGCTCCAAAACGCCCACT
AAACGTTCGCCACCCGCTTATGTAATGACGGGTCGAGGGCGTGTGGGTGG
ATTCAGTGAAGACTTGAGTAAGGTCAGACATCTTTGCTTATTCTTCAACC
TACAAAGCAGTCTTTCTTGAGTTAGGGAACAATTCTAGTCGAGAAGTTGC
TAGTTGCTACTTTCGAGTTCGGAAGTTGCTAGTTTCAGTTGGTCAGACGT
CTTTGGTTGTTTGTCAATCTAATAAATAATCTTAGATTTATCCATGAGCG
AATCTAATACGATTCTGCTCATCAAAGTTTATCCATTCCTTATTGAACAA
AAAGAAGTCTTTCGTTACGTCGCACTTCAATTATTTGAACCTTTCTATAA
TTGGAAATAATTATCAGTCCTCGCCAAGGTGGAACCCTCTCAAAATACTT
CCTATCATTTGATATCTCTAATGTTTTTCGACCAAAAGCAAATTTCGAAT
TAGTGACAGTCAACTTTTTATACTCGATTGTTTAATCGTTTCAGACACCT
GGGCCGGGGACTTATAAAGTGAACGATCCAAATTCATGGAAACATCGGGC
GCCAAGCTACTCAATCAGTGGTCGATTTATGATGCCTGGTGATTCAACAC
AAAAGCCTGGACCTGCGCATTACAGTCCTCATAAGGTAACATTTGTGTTT
TGTTAATTACTGTTTGCTTTGTGTTGTTTCGGTCGATGTTGGTTATATTC
GAGCTTAATTTGAGTGAAAAGAATTCATATTTTTCTATTCAAGATTGTTT
TAAATAATGAATTAATTAGTGGGTGAAAAAGAAGTAATCAATTTTATCCA
CTATCCTTTGTGTTGTCGAAGTGGGCAAGATTTCATTTTTCGGACTAAGA
TTAAAATTAAGACTCGCTTTTTCGGAATACCAgcgaaaagaatttttttt
tcaagaggtACGGAAAACAGCCTTCTGCCAAATGGCTGACTGAAGTTCAT
TTATCAAATACCCGAAATGTTGATCTTTTTCTGCTGGAAAATTGCAGTGA
AATCTTCATGAAGTCATCAGACTCATTTCGACGGACGGTATTCGTCATAT
AgataatttaaaatattaaaataaaatattaaagtaTTAAAATATATACA
GATACATTTATCATGATTTGACTTGGCCAAAAAACAAGAAGACCTACTAA
AGTAAGCTTTTTTGCTAGTGTTGATTTGATTGAAATTGTTCTATATTTCC
GTTTCTCATTTCAGCAAAGATCCGGAACTGGTCCATCTTTTGGTGTACGG
CATTCAGAATATACCGCACCTGTTCTTTTCTCTACATGCTGATTGGTTGT
CGCCTGCAATTTGATtggatttgaaaatgttttatctGCAAGCTGATTGG
TTAAAGATGTTGACAATGCgaactgattggttgaaaatatTAACTATGCA
AGCTGATTGGTTAAAGATGTTGACAATGCgaactgattggttgaaaatat
TAACTATGCAAGCTGATTGGTTTGTTTAAAGTGTTATTTGTGGATGGGAA
GTTCTGATTAAATTACATTCCAGAGATAAATTGAAGTGTGCTTTCATGGT
TCTTTGTTGTGTGCTTTTTagtttgattttaaataaaTAGTTTTTATCCA
CTCTGTCTTAGTAATATACTAATTCATAGATACTTTGATTAACTGCTCTG
TTCTTTTGTGCTTACTTGTAGTGGAAGGGGCTATACTGGATTTTTTATGC
TGTTACTCattccccagctggcacacaacgtcttGTACACGCTGGGTCTG
AAACAGTTTAAATATTTGACGAATCGAAAGCGAAAGTATAACTTTAGAAA
TAACTTTCTTTTTCCGCAATCCCTTATTCCTAGTTCCTTATGACCCTTCC
CTCACTACACTCAAGCACCAGAGATCTCCATGTAGGGTAAGTATATCTTT
TACTTTCGACTATTTTTTCTTGTCTtgtattattattttgttattcttta
tctaaaatcaaattttacagGAAGGCTTTACTCCaaattttataatcttt
ttctGTAACATATACAactcaaatttttttaacaaattattttattttta
agtgatttatatatttttttcttcttaacaaatttatatacacgtttttt
ttattagaacccagtttataagaacattgaggctgaaattcgtcgaaaaa
ttaataacatcgtaagaacatgcccagcctcagtttggaaaaaaatgacg
agAAACTACAATTCTAACTGAACTTAGAGATGAATTTCCTAAAACCGAAA
GTCAagtattgtccaaattttaccaattttaagtgctctttattttgcat
gatattgtcgatttacagtagtctgaaaaattaagaacgcatttaagaac
attttaggctgaaaattgctaaaaaaataagcacatccaggctcagccaa
Naaattaagaacgcatttaagaacattttaggctgaaaattgctaaaaaa
gtaagcacatccaggctcagccaaattttaggtgttctgataaaaaaaac
aacgtgtaccTACTATTTTATTTCACCTAATTATTTCTTTTATGGGCGTG
GTCCCTCATGTAcgcttttcaattatttttgaacTTTCTTCTTAAAGCTG
CGTAATTTGAATTCAAGTCTTTTTTTtatgtattattttttctaaaattt
attttattttgttgatgGTATTGTAAAAAGAAACCTACATagtatgaatt
ttgaaaattacggTGAATGCTTACATTATAATAAAAACTTGTCGAAATTT
CC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015374XLOC_015374Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027312-exon-sc0000616-1491911889:64106..64209TCONS_00027312-exon-sc0000616-1491911889:64106..64209Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1510915933:64106..64209TCONS_00027312-exon-sc0000616-1510915933:64106..64209Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1575043694:64106..64209TCONS_00027312-exon-sc0000616-1575043694:64106..64209Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1491911889:72695..73019TCONS_00027312-exon-sc0000616-1491911889:72695..73019Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1510915933:72695..73019TCONS_00027312-exon-sc0000616-1510915933:72695..73019Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1575043694:72695..73019TCONS_00027312-exon-sc0000616-1575043694:72695..73019Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1491911889:73252..73475TCONS_00027312-exon-sc0000616-1491911889:73252..73475Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1510915933:73252..73475TCONS_00027312-exon-sc0000616-1510915933:73252..73475Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1575043694:73252..73475TCONS_00027312-exon-sc0000616-1575043694:73252..73475Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1491911889:74100..74240TCONS_00027312-exon-sc0000616-1491911889:74100..74240Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1510915933:74100..74240TCONS_00027312-exon-sc0000616-1510915933:74100..74240Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1575043694:74100..74240TCONS_00027312-exon-sc0000616-1575043694:74100..74240Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1491911889:74820..76357TCONS_00027312-exon-sc0000616-1491911889:74820..76357Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1510915933:74820..76357TCONS_00027312-exon-sc0000616-1510915933:74820..76357Clytia hemisphaericaexon
TCONS_00027312-exon-sc0000616-1575043694:74820..76357TCONS_00027312-exon-sc0000616-1575043694:74820..76357Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000616supercontigsc0000616:64106..76357 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5477	3.4593	1.80668	3.92917	297.899	249.505	77.2129	72.0902	46.8099	57.4405	43.4358	38.8292	6.10499	6.25225	16.6585	15.6489	21.0595	21.8409	15.2576	17.4561	19.2443	18.0756	7.32206	13.3139	9.97451	15.8335	27.2498	23.8829	11.0264	5.61673
Blast
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BLAST of TCONS_00027312 vs. Swiss-Prot (Human)
Match: ODF3A (Outer dense fiber protein 3 OS=Homo sapiens GN=ODF3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 9.087e-35
Identity = 89/238 (37.39%), Postives = 126/238 (52.94%), Query Frame = 3 
Query:  195 IMAMFSGPGPACV-----GRLGLD----NGPKYSFGLKPGQRVDAFTPGPAAYTVHDKSTRFGSDGSPKYTLHSRTKQGNSFTTPGPAAYSTEKVKIFKQPTPPSYSFGSRTRFNKRDGSPAPNAYTVPPIFGSKTPTKRSAPAYVMTGRGRVGGFSEDLSKTPGPGTYKVNDPNSWKHRAPSYSISGRFMMPGDSTQKPGPAHYSPHKQRSGTGP-----SFGVRHSEYTAPVLFST 866
            IMA++S PGP  +     G +         P YSF   P    +  +PGP  Y V+ K  R G D  P Y++  R  Q  +  TPGP  Y  EK   +   + PS+S  +RT+  + D +P P AY +P + G  T  K S P++ + GR ++GGFS+DL KTPGP  Y+  D    K +AP Y+++ R   PGD T KPGP  +SP K  + T P     +FG++HS+Y  P+L   
Sbjct:   19 IMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPR-YNVNPKILRTGKDLGPAYSILGRY-QTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKV-TLTKPCAPVVTFGIKHSDYMTPLLVDV 253
The following BLAST results are available for this feature:
BLAST of TCONS_00027312 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODF3A9.087e-3537.39Outer dense fiber protein 3 OS=Homo sapiens GN=ODF... [more]
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