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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027263 ID=TCONS_00027263|Name=TCONS_00027263|organism=Clytia hemisphaerica|type=transcript|length=1271bp
CTATGGATATGGCATTAAATGTATTATTTTGTTTATTGTagtatttattc
ctatttttatattatttattcctattttttatatttatcatttttcttct
gtttttcataatttattagatttttttaaattattatattcaaaacaaag
taaTGTTTCTACCATTTTAATAGGTTTTTGTTAATTgctttattattttc
ttgtattctttttgttattcatttgcctactcaaaaatcaaaaagactgt
CACAGAGTTTAAAAAATAGACAATATGGAAGAATATGGAAGTGCATTGCA
AGTGAATTGCTTCATCTATATATGTATGCATTTTGGTTGATATTATAAGG
ATAATTATTGAAACGTTGAATAGTGGTATAAGTGGatatatatttctatt
ttggaATTATTACAATTGATGTAATTGCTTATCCTAATGCAGCTTAAATT
CATTGAATCTCAAAATATCCTAAATCGTCGTCATTTTCAGTCTTtattaa
caaagagtcgaatggcttcgaaaattttcattacaatCACCAACATTCGA
TACAATCGCCGACATCGATACTGCAAAATATGCGCTTAAAAGTCATTGTA
TCATAATCGTTTCATCCGATTTTCACAATATGCTGTATTTGCTCAttgga
aacataaaattttatgattttcagcatttctatAGTTAAACAACTGTCGC
GCTCAGCCACCAACCGACtattgataatacaaaaataacaattcttATCG
CGATCTCCATGATTCCACTGTGACTTCTTCGACGTATGTATCCAGACTTG
ACCTCAATCTTCGAAATGTCTGGTGATTTGTtcctgttggaaaaaaaaaa
cgttttggtatgtaaactttgtatggtttgattactcgaaatgtgacatt
tatgtaaacgaaacactgagaactaatttttattattttggaagccggaa
atccaccggatgtgaaaaaaagccaaatttgcaCATTACttgtaaatttg
taaattgcTAGCTATTTTCTATGAACTATGTACTATCGAAATTTTGGAAT
TACGAATACTTGGAAttatataatttttagattcatGAAATCCACACTCA
AGTTACTCGTTTTTGCCGCTATACCAACCTGTATTTTCCTGTTCATTAAA
AAACGAAAGCAGATTTTCGGCTAgaatgaaagaaaacttttctacGAATT
GCTTGGAATCTCGAACCTTGTCtcttttcaagttcaaaatattggaTATT
TTTGACCGGAAATGACGTAAA Run BLAST on NCBI transcript from alignment at sc0000612:4353..5623 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027263 ID=TCONS_00027263|Name=TCONS_00027263|organism=Clytia hemisphaerica|type=transcript|length=1271bp|location=Sequence derived from alignment at sc0000612:4353..5623 (Clytia hemisphaerica)
TTTACGTCATTTCCGGTCAAAAATAtccaatattttgaacttgaaaagaG
ACAAGGTTCGAGATTCCAAGCAATTCgtagaaaagttttctttcattcTA
GCCGAAAATCTGCTTTCGTTTTTTAATGAACAGGAAAATACAGGTTGGTA
TAGCGGCAAAAACGAGTAACTTGAGTGTGGATTTCatgaatctaaaaatt
atataaTTCCAAGTATTCGTAATTCCAAAATTTCGATAGTACATAGTTCA
TAGAAAATAGCTAgcaatttacaaatttacaaGTAATGtgcaaatttggc
tttttttcacatccggtggatttccggcttccaaaataataaaaattagt
tctcagtgtttcgtttacataaatgtcacatttcgagtaatcaaaccata
caaagtttacataccaaaacgttttttttttccaacaggaACAAATCACC
AGACATTTCGAAGATTGAGGTCAAGTCTGGATACATACGTCGAAGAAGTC
ACAGTGGAATCATGGAGATCGCGATaagaattgttatttttgtattatca
ataGTCGGTTGGTGGCTGAGCGCGACAGTTGTTTAACTatagaaatgctg
aaaatcataaaattttatgtttccaaTGAGCAAATACAGCATATTGTGAA
AATCGGATGAAACGATTATGATACAATGACTTTTAAGCGCATATTTTGCA
GTATCGATGTCGGCGATTGTATCGAATGTTGGTGattgtaatgaaaattt
tcgaagccattcgactctttgttaataAAGACTGAAAATGACGACGATTT
AGGATATTTTGAGATTCAATGAATTTAAGCTGCATTAGGATAAGCAATTA
CATCAATTGTAATAATtccaaaatagaaatatatatCCACTTATACCACT
ATTCAACGTTTCAATAATTATCCTTATAATATCAACCAAAATGCATACAT
ATATAGATGAAGCAATTCACTTGCAATGCACTTCCATATTCTTCCATATT
GTCTATTTTTTAAACTCTGTGacagtctttttgatttttgagtaggcaaa
tgaataacaaaaagaatacaagaaaataataaagcAATTAACAAAAACCT
ATTAAAATGGTAGAAACAttactttgttttgaatataataatttaaaaaa
atctaataaattatgaaaaacagaagaaaaatgataaatataaaaaatag
gaataaataatataaaaataggaataaatactACAATAAACAAAATAATA
CATTTAATGCCATATCCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027263-exon-sc0000612-1491911889:4353..5623 | TCONS_00027263-exon-sc0000612-1491911889:4353..5623 | Clytia hemisphaerica | exon |
| TCONS_00027263-exon-sc0000612-1510915933:4353..5623 | TCONS_00027263-exon-sc0000612-1510915933:4353..5623 | Clytia hemisphaerica | exon |
| TCONS_00027263-exon-sc0000612-1575043694:4353..5623 | TCONS_00027263-exon-sc0000612-1575043694:4353..5623 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000612 | supercontig | sc0000612:4353..5623 . |
Blast
The following BLAST results are available for this feature:
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