TCONS_00030538-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00030538-protein
Unique NameTCONS_00030538-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length364

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00030538-protein ID=TCONS_00030538-protein|Name=TCONS_00030538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
PKKHSAYQLENNRSHSEDIKDGEINEENESESNDNDIFSTKTQTDGGGFS
KKGDKHNGFDVLQQNFKLGLNASKEFADFLKERSNIEESYSKSLLKLAHK
CAAANNNVGIFEPCWKFLQSSTEKLANVHSQVILHLNDVSKAVREYGEQQ
KEKQKHMKDDFSSTNEAVQNLQQLSVALLKTKEAYHQRSQEVEKYRKEMT
NLKDIKTAETKYKKSTEEYKQMVERREIARKEFQEKITEMSQKLQTVEES
HLKQMLELLSKYGESIKVERFLLEQIIDEFGRNMVALTVDKLLQQFINLK
QTGKDVPAQIDFEEITLETQPVDLEAVAQALKEEKQKRKKEKQNKRAERK
TKKKEKTTVTNGSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_017508XLOC_017508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00030538TCONS_00030538Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001060FCH_dom
IPR031160F_BAR
IPR027267AH/BAR-dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..250
NoneNo IPR availableCOILSCoilCoilcoord: 324..357
NoneNo IPR availableGENE3D1.20.1270.60coord: 54..268
e-value: 3.0E-6
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..364
IPR001060FCH domainSMARTSM00055fch_2coord: 47..136
e-value: 3.1E-11
score: 53.3
IPR001060FCH domainPFAMPF00611FCHcoord: 58..131
e-value: 4.0E-16
score: 59.0
IPR031160F-BAR domainPROSITEPS51741F_BARcoord: 42..311
score: 20.125
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 57..314

Blast
[Close]
BLAST of TCONS_00030538-protein vs. Swiss-Prot (Human)
Match: FCHO2 (F-BAR domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.680e-59
Identity = 113/285 (39.65%), Postives = 179/285 (62.81%), Query Frame = 0 
Query:   53 GDKHNGFDVLQQNFKLGLNASKEFADFLKERSNIEESYSKSLLKLAHKCAAANNNVGIFEPCWKFLQSSTEKLANVHSQVILHLNDVSKAVREYGEQQKEKQKHMKDDFSSTNEAVQNLQQLSVALLKTKEAYHQRSQEVEKYRKEMTNLKDIKTAETKYKKSTEEYKQMVERREIARKEFQEKITEMSQKLQTVEESHLKQMLELLSKYGESIKVERFLLEQIIDEFGRNMVALTVDKLLQQFINLKQTGKDVPAQIDFEEITLETQPVDLEAVAQALKEEKQK 337
            G+K++GFDVL  N K G  ++KE ADF++ER+ IEE+YS+S+ KLA K A+  + +G F P W   ++STEKLAN H  ++  L ++ K V++YGE+Q +  K  K++ + T EAVQ +Q ++ AL K+KE Y+ +  E E+ +KE    ++I+ A  K KK+T+ YK  VE+  +A+ +F++K+TE +QK Q +EE+HL  + E++     +IK     + Q+ +EF  NM   TV+ L+Q+F   K TGK+ P  I+FEE        D  +  + +K  K+K
Sbjct:   12 GEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLA-KSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEE-------CDTASAVEGIKPRKRK 288
The following BLAST results are available for this feature:
BLAST of TCONS_00030538-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCHO25.680e-5939.65F-BAR domain only protein 2 OS=Homo sapiens GN=FCH... [more]
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