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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027237 ID=TCONS_00027237|Name=TCONS_00027237|organism=Clytia hemisphaerica|type=transcript|length=1368bp
ctttCATAAAGTTCCTTCATCTTTCTACATGGATTATGCTTGTATCAGCA
TAGCTGCGCTGGCAACAATATGTCACCACTTTCTAAAAGCCATGggtttt
ctttaaattttattaGCTATTGAAGAAAAGCGggatgcaaaaaatcatat
aaaaaaatttcgTGAGTATTTCAGATAGTTAAACGTTTTCAATTCCTTTT
TTCTTAACCCAAAATACGATTATTTAGGAGTTTTTATCATTGATTTGTTT
GATAAGTAATTTAtttaaattcgccaaaattagtttcccTAAGGTATTAG
ATCTAAATTTCTTATATAGCGTTTCCAGGACGAACAAGTTCAAAACCAAG
GAAAACAGCCAGTAAGTATTCGTTTATTATAATTGTTTCATCATCATCAC
GTCCCTTCATTCTTATCTTATCTGCTTTCATTACAATACCTTTTTTTCAT
CGAGCATTACAATTAATTCGGATTAACTTTTGCGAGGTCAGAAATTCACG
AAATTCTTTGGATTAACTTTTGCGAGGTCAGAAATTCACGAAATTCTTtg
gataaactttcgcaaatgaGCGATTGTAAATTTTTCGCGAGATTTCGCAA
ATTACGAAATTTGAAAtacgaaattcgcgaaagttgaTCCGAGTGAAGTA
GTTGAACTAAATAACgattatttggaaatttttctcactGATTTGTTTGT
AAAAAAACAACTATTGACAAGTCATATTACATAGATCTGAATTTTTGTTT
AGCAACGGCAAGTAAGGATTTGTTTATTATAATTGTTTCATTATTGTTGT
TATCATCATCATGTcccttttttatcttctttcGTTAAAATACAcgatta
aaatttgaaaaaagtcacaTTGTTATCAGTTCCCAGATCATCTTCCATCg
caatgtttttttcttgtttttttttttagcgAGCAATGATCAACCATCAC
CTTGTGCGCCTGGTAAGTATGTCATTTTAATTATTTCTGCGTTACTGGTA
TAACATTATTTTTATCTATTAACTTTCAAtgcaatatttttctctttttt
atttagCGAGCAATGATCAACCATGACCTTGTGCGCCTGGTAAGCATGTC
ATTGTAATTATCTTTGCATCACTGGTTAAACATTATTTTTATCTATTAAC
TTTCaatgcaatatttttcttttctttctttggcGAGCAATGATCAACCA
TCACCTTGTGCGTCTTGTAAGCATgtcattttaattatttttgcatCACT
GGTATACCATTATTTTTATCTCTTAactttcaatgcaatttttttctctt
tttttagcgAGCAATGATAAACCATCACCTTGTGCGCCTGGTAAGCAGCA
TCtcatttgaattatttt Run BLAST on NCBI transcript from alignment at sc0000611:2102..3469 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027237 ID=TCONS_00027237|Name=TCONS_00027237|organism=Clytia hemisphaerica|type=transcript|length=1368bp|location=Sequence derived from alignment at sc0000611:2102..3469 (Clytia hemisphaerica)
aaaataattcaaatgaGATGCTGCTTACCAGGCGCACAAGGTGATGGTTT
ATCATTGCTcgctaaaaaaagagaaaaaaattgcattgaaagtTAAGAGA
TAAAAATAATGGTATACCAGTGatgcaaaaataattaaaatgacATGCTT
ACAAGACGCACAAGGTGATGGTTGATCATTGCTCgccaaagaaagaaaag
aaaaatattgcattGAAAGTTAATAGATAAAAATAATGTTTAACCAGTGA
TGCAAAGATAATTACAATGACATGCTTACCAGGCGCACAAGGTCATGGTT
GATCATTGCTCGctaaataaaaaagagaaaaatattgcaTTGAAAGTTAA
TAGATAAAAATAATGTTATACCAGTAACGCAGAAATAATTAAAATGACAT
ACTTACCAGGCGCACAAGGTGATGGTTGATCATTGCTcgctaaaaaaaaa
aacaagaaaaaaacattgcGATGGAAGATGATCTGGGAACTGATAACAAt
gtgacttttttcaaattttaatcgTGTATTTTAACgaaagaagataaaaa
agggACATGATGATGATAACAACAATAATGAAACAATTATAATAAACAAA
TCCTTACTTGCCGTTGCTAAACAAAAATTCAGATCTATGTAATATGACTT
GTCAATAGTTGTTTTTTTACAAACAAATCagtgagaaaaatttccaaata
atcGTTATTTAGTTCAACTACTTCACTCGGAtcaactttcgcgaatttcg
taTTTCAAATTTCGTAATTTGCGAAATCTCGCGAAAAATTTACAATCGCt
catttgcgaaagtttatccaAAGAATTTCGTGAATTTCTGACCTCGCAAA
AGTTAATCCAAAGAATTTCGTGAATTTCTGACCTCGCAAAAGTTAATCCG
AATTAATTGTAATGCTCGATGAAAAAAAGGTATTGTAATGAAAGCAGATA
AGATAAGAATGAAGGGACGTGATGATGATGAAACAATTATAATAAACGAA
TACTTACTGGCTGTTTTCCTTGGTTTTGAACTTGTTCGTCCTGGAAACGC
TATATAAGAAATTTAGATCTAATACCTTAgggaaactaattttggcgaat
ttaaaTAAATTACTTATCAAACAAATCAATGATAAAAACTCCTAAATAAT
CGTATTTTGGGTTAAGAAAAAAGGAATTGAAAACGTTTAACTATCTGAAA
TACTCAcgaaatttttttatatgattttttgcatccCGCTTTTCTTCAAT
AGCtaataaaatttaaagaaaaccCATGGCTTTTAGAAAGTGGTGACATA
TTGTTGCCAGCGCAGCTATGCTGATACAAGCATAATCCATGTAGAAAGAT
GAAGGAACTTTATGaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027237-exon-sc0000611-1491911889:2102..3469 | TCONS_00027237-exon-sc0000611-1491911889:2102..3469 | Clytia hemisphaerica | exon |
| TCONS_00027237-exon-sc0000611-1510915933:2102..3469 | TCONS_00027237-exon-sc0000611-1510915933:2102..3469 | Clytia hemisphaerica | exon |
| TCONS_00027237-exon-sc0000611-1575043694:2102..3469 | TCONS_00027237-exon-sc0000611-1575043694:2102..3469 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000611 | supercontig | sc0000611:2102..3469 . |
Blast
The following BLAST results are available for this feature:
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