TCONS_00029167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00029167-protein
Unique NameTCONS_00029167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length274

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00029167-protein ID=TCONS_00029167-protein|Name=TCONS_00029167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
LDLTKARWFVWRTTGSDGKTWSCHHFQVDDLCIMVDRIEKNILYEDFVAQ
HLKENKPCIFSSNLIADWKCVNSWVKSDHLNTDFIEKHFGNLTAPVMDCN
KQYFSSHEKEDMKVSEFIKYWNDRDDRLLYLKDWHLQKLTDERFYDIPTF
FTSDWLNEYFDRDGKDDYRFVYIGVKGSWTSFHADVFRSYSWSANICGLK
KWIFFPPGEEDKLRDNFGNLPFDVSSLSLDEMDITYFVTFQKSGEVIFVP
SGWHHQVFNLEDTVSINHNWVNAF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016595XLOC_016595Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00029167TCONS_00029167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainSMARTSM00558cupin_9coord: 129..274
e-value: 2.8E-17
score: 73.4
IPR003347JmjC domainPFAMPF02373JmjCcoord: 171..270
e-value: 4.4E-18
score: 65.7
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 136..274
score: 34.402
NoneNo IPR availableGENE3D2.60.120.650coord: 34..272
e-value: 2.7E-39
score: 134.7
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 35..272

Blast
[Close]
BLAST of TCONS_00029167-protein vs. Swiss-Prot (Human)
Match: JMJD4 (JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 5.219e-75
Identity = 114/248 (45.97%), Postives = 156/248 (62.90%), Query Frame = 0 
Query:   44 YEDFVAQHLKENKPCIFSSNLIADWKCVNSWV-KSDHLNTDFIEKHFGNLTAPVMDCNKQYFSSHEKEDMKVSEFIKYWND-------RDDRLLYLKDWHLQK-LTDERFYDIPTFFTSDWLNEYFDRDGKDDYRFVYIGVKGSWTSFHADVFRSYSWSANICGLKKWIFFPPGEEDKLRDNFGNLPFDVSSLSL--------DEMDITYFVTFQKSGEVIFVPSGWHHQVFNLEDTVSINHNWVNAF 274
            Y DFV   L  N PC+FSS     W     WV  +   + D + + +G++  PV +C  Q ++S+ KE M + ++I YW +            LYLKDWHL +    E  + +P +F+SDWLNE++D    DDYRFVY G  GSW+ FHAD+FRS+SWS N+CG KKW+ FPPG+E+ LRD  GNLP+DV+S +L        +++        Q++GE++FVPSGWHHQV NL+DT+SINHNWVN F
Sbjct:   87 YADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGF 334
The following BLAST results are available for this feature:
BLAST of TCONS_00029167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JMJD45.219e-7545.97JmjC domain-containing protein 4 OS=Homo sapiens G... [more]
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