TCONS_00027169 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027169
Unique NameTCONS_00027169
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027169 ID=TCONS_00027169|Name=TCONS_00027169|organism=Clytia hemisphaerica|type=transcript|length=1484bp
CCGAAGGAAAGTTATTTTCTACCGTTATATCAATTTGTTACCATAACACT
TTACCAGAAgaatttttgttcaattaaTTAGCTGCTTCTAATTGTATGTG
GTTACGCTCAAATTGATTAACGTGGTTCATTAATTAAGAcagtaatttgt
tattttttggttATATTTTGGTATTTGATACATTCAATCATCAATTAGGT
TGAGAATTATTTTGAATTCTTGAGGATTCAAAGGTGATATTAAAATGACA
ATACACTCACTTGACGCTCGAAAAGAATGTTCGCTACGCTCTATAACTCA
TATGAATCTTCTTATAATACTGATATTACATATTATGATAACAAGTGTAA
CATGTAATANTTATAACTCATACGAATCTTCTTATAATACTGATATTACA
TATTATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAAGACGTT
ATACAGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGTGGTGAG
AGTGTACAAGACTGGTATATTAACAAGACTACAGGATTATGTGAATGCAT
GAGAAACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTG
TTAGAAGCCAATCTGCTTGCCAagATTGCACTCAAGTCATGAATAAAAAC
TACCCTGTCCAAGAATTTACTGGAGAAATTAAAGTCGACAAAACACCTGC
CAACTGTTTCAGTGGAGAAAACGTTTTAACAGAACCAATCACTTTCATGT
ATTTTCGACAATTCGAATGGATCGCCGAAAAAACGTTTATCACCAAGATC
GAAGATTACCATGCACTGaTCAAACTACCACTCAGTACCCCCGCTGGTCA
CCTCAAAGGACATTTTATCAAACTGGAGATAGAATGCGAGGGGAAAATTG
AACGTTTGTTTACCAAGCTAGAAGGCGTCAtgaCCATCACAGATCCTCTA
GCAGTCAACTCAAAGATCACACCGAAACCTCCGATCACCAACGGGACCTC
AACAACAACCACTACAACTAAATCACCGACCACCCTTCAACCTAATATAA
ACAACACTGTAACCATAACCAACGGAAATGCAAAGACCAATGATTCAAAA
ACTCAATCACCAGTGTATACTCTTCAACCTCCGAGAAATGAAACAATAAA
CACACAAATAATAACTACAGAATCGGTGATCAAAGAAACCCCACATACAA
CACATTCAACAACAATCAAACCAAACAATTCACCAAGACTTCCAACAACC
AAAAACACGACAACTGTTATTACTCCAAAAAATCCTTACGCTAAAGCAAC
TCCAATACCGAACATTCTACCTTCCGAAGCAAACGCAACAGAATCACCGA
AGACAACAAGAAGAAGAGCTAGAACAACCCCTCCCCGACCAAATAAACCA
ACAACTCCCACAACTCCAAACTggcttataaaaacaaaaacaaacgcgAC
AAAGTCCACTCTTCGcaacacaaaaacaaaagag
Run BLAST on NCBI

protein sequence of TCONS_00027169-protein

>TCONS_00027169-protein ID=TCONS_00027169-protein|Name=TCONS_00027169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MITSVTCNTWVIERRYTGDIIRNIPANFKCGESVQDWYINKTTGLCECMR
NTPTFVVYGDGSFGCVRSQSACQDCTQVMNKNYPVQEFTGEIKVDKTPAN
CFSGENVLTEPITFMYFRQFEWIAEKTFITKIEDYHALIKLPLSTPAGHL
KGHFIKLEIECEGKIERLFTKLEGVMTITDPLAVNSKITPKPPITNGTST
TTTTTKSPTTLQPNINNTVTITNGNAKTNDSKTQSPVYTLQPPRNETINT
QIITTESVIKETPHTTHSTTIKPNNSPRLPTTKNTTTVITPKNPYAKATP
IPNILPSEANATESPKTTRRRARTTPPRPNKPTTPTTPNWLIKTKTNATK
STLRNTKTKE
Run BLAST on NCBI

transcript from alignment at sc0000608:40165..49270-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027169 ID=TCONS_00027169|Name=TCONS_00027169|organism=Clytia hemisphaerica|type=transcript|length=9106bp|location=Sequence derived from alignment at sc0000608:40165..49270- (Clytia hemisphaerica)
CCGAAGGAAAGTTATTTTCTACCGTTATATCAATTTGTTACCATAACACT TTACCAGAAGAATTTTTGTTCAATTAATTAGCTGCTTCTAATTGTATGTG GTTACGCTCAAATTGATTAACGTGGTTCATTAATTAAGACAGTAATTTGT TATTTTTTGGTTATATTTTGGTATTTGATACATTCAATCATCAATTAGGT TGAGAATTATTTTGAATTCTTGAGGATTCAAAGGTGATATTAAAATGACA ATACACTCACTTGACGCTCGAAAAGAATGTTCGCTACGCTCTATAACTCA TATGAATCTTCTTATAATACTGATATTACATATTATGATAACAAGTGTAA CATGTAATANTTATAACTCATACGAATCTTCTTATAATACTGATATTACA TATTATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAAGACGTT ATACAGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGTGGTGAG AGTGTACAAGACTGGTATATTAACAAGACTACAGGATTATGTGAATGCAT GAGAAACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTG TTAGAAGCCAATCTGCTTGCCAAGGTTTGTCATTTTTTTCATATGTATAT TTGGGTATGTAGATAATATTGCTAGGAATTTGACCATCCTTTAACCCCTT CAGTACTGCCCAGATAAATTTTCTTCATTTATAAAGGAAAAAACTTTAAT TGAGAAGTTTTGAAAGAAACTTTCAACTTCAATTTCCAGACTTAAGGGGT TGACTATAAATCTGACTCCTGACCATAAATAAGATTTAAAAGGGCATTTT TAAACGCTGCTTTGTAAAAGAGTATGAAACTACCTTTGGTACCAAAACCA TTGTCTAACTCAAGTCAAGTTCAGTAGCGTGGTGGGTCGATTAAACCTAG GGAGGTAATTTTAGAAGATTTAGATTTTGGCGCCCCTATGAAAAGTAAAT ATTATTAAAAAAAAAAACGCGAGCGAAGCTAGCACGAAAACTGTTGGGTA TTTTCTCTCTTTTTGGCCAAAAACTGCCATAACTAAAGTGTAAAAGAGAA AAGGGGCGCCGAAATTAGTAATTAGAGGTGTCTTTTTGCAACCTTTGTAT TTCAGCGCCCCTTTGAAAAACCTCCACTAGGGGAGGGGGCATTTGCCACC TACCCCCCTCCCTGCCACCATGCTACTGGTCAAGTTACAAGCTTTTATGC CAATTTGACGTTTTGGCTTTCAAATTTTTTCTCACATTTTTTAAAAAATG CTGCGCGCTGGAAAGGCTAAAGATTAATATTTTTTCAAGATGGATAAAGA ATAAAAAGAAACGGTCACACATGATTACTTACTTTTGAATAGTTATGTTA CAAAATCTAAACGTAATTATGTTTAATTAGTATCGCATCATCATCATGCC GATTCTTAATCTGAACGGGTTGTTTGAGATTAACATTTTCTGAAATCTTT CTTTTTCTCAATAATCGACTCTAAATATACCATAACACTGTGATTAAAGT GAATTTCAGAGACTGTTGATGGTGCAATATTTCTATTGAAGGCTATTTCT ATTGCTTTCTTTCACGTACAATAAAATATTACTTAGACAATTAAATTTAA AGTACTATACAATATTAGTCAAGAAATATAGTCCTAAGTAAGAGTCTTGA AATCCTACATAGAAATGTTTGAGGCCAAATATTGACCTGTGAGGACAAAT CGAGATTGTATTCACCATTTCTTTCAGTATTTTTGTGCAATAGACGATAT CGGCTTTCCGAATTCTCCCTGAATGATTACCAATGATGCAGAAATGCACG GAAAGTCAATATCGTCCGTGAATTTTTTTGCGCAATGCATCATGGGTAAT CATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTTGTTTAAAAATTT GGGTTCTTTAGAGTTTTCAAAGCCTTGAAATGTTCTTAACTTGTTTTTGA TATTTTGGACATTGAAGCTTTGTGTTCTTATAAAAAATACGTGTAGATTT GAAGGGATGGGAAATTACAGGTTTCGTTAGGTTTGGCTAGGTTTGTTGCA ACAAAACTAATGAAAAAATTAAACTGTAAAGGCTTGGGGACACGAGAAGT TTTTTCCCGTTGGTACAATACAAAATGCTTTATCCCACCAATACTCTCGG GTACTTAATAGCCGTCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCAC CCAGGACATTCTTATTCCAACCCCCCCGCTTATTAAGTGTTGAGATTTTT TCCAACCCCCCCGCTTATTCCAACCCCCCCGGCTATTAGGTACCCGAGTA CAAGAAAAAAAGTGCGTGTCTCATGGTTTTTTTTTTTGTTTCACGAGACA AAAAGTGAGGGAAATACCCGAAAAGAAACGCTGATTTTGTCCCTGGGACA ATAAAATTTTGTCAATTGGACAATCCATTGTCCCAGGGACAGAAGTGAGA TTTCACTTTTATTGGTAAAAAGAAAAATGGGGCAGAGACACGAGAGCATC GCACCAACGCGAAAAAAACTTCTCGCGTGTCCCCAAGCCTTAACTATTTC AATTTCTATGACAATTTTAAACTTTCTCGGCTTTAGAAAAGCAACTTAGG TCAAGTTGGTTCACGGGAGAGCTCATTTCATCGTATCAGACCTTTTTAAT TAGGTGAGATCATGAGATTTGTCTGGGTGGTATATGTAAAGATTTAAAAT TACTTTGAATTGAAAGCAAAACGTTTCGTAATTCTGCAAACCTTAACACA AAAAACTCCCAACATATTCGAAACAAAAGAATTGTATTGAAGGAAATCAG ATTTGTTTGTTTACAATCCGTTAAACGGAGCTAGACAATTTTATCTGGCA CCTCGGCAATACTAACGTGTAATTAGCGGACCCATGGTAACATATAATGA AGTCAGCAACTATTGTTATATAAGAATAATCGTAAGTCTACACTTCCCAA CTTTTTTAAGCTGAAAATACATTCGATATAAGCAAGTGAAGCTTGATTTC ATAAAACTTGTTCGTTCTTTAAAGAATGACTCTTATCGTAGAACAAATAA ACAAAAGTCTCGAATGACTCCGTAACTAGAACAACTCTTAGGTCCCCTCA GTGAACAATGTCTTTATAAACCTTACTCCATAACTCGAAATTTCCTTAAC TCGAACATATTTGCGTTCCCCTGACCGCCATTTTACAACGTGAAAGGACT GACACTGGGTACAGAGATTGATTAGTAAGGTAGTACACGTTTTTTTATAA GAACAAACTATATAAGAACATAACGCTTCGATGGCTAAAATGTTAAGAAC AAGTTAGGAACATTTTAAGGCTTCGCGGACTCGAAAACAGCTAATTTCTT AGGAAAATGGACAAAAATACATAGAAAGTGGGGAAAATAAGAAATTTTTT AGGCTTGAAACTCAAAAAGTTAAGAACATCTGTAGGCTTCAAAAATTTTA AATGTTCTTATAAAATAAACGTGTAAGTTTCAAAGCCAATAGGTAGTTTC TCTAGACGTATCTTTTGAACCAAAGACAATGGCGATGGTATTTCCCTTTT CCTTCTCGGGAAAAAAATATTTTATACATGCAAAGACTTTTAGGAAGATT AAGAACTATATCCCTCATCTTTCTCGGAAACGAAAGATTTCAGACATTCC AAGGCTTTTAGAAAGATGAAGAGCTAATGAAAAATATATCAACTAAGCGA TAAGCTTCTTATGTCTTATGATTTTTTTACAGCATTATTTAAACTTTTCG TTTAACGGAATATTGGCCTCATTTTCAAATAGCTTTTAATCATGTGATAC GTGTCTGACGAATGGAAAATCTGATAACTAATGACTTCCTGAAAAAAGCT TTTCACCTCAACGAAAACGAGCATTGAAACTTTTTTGAACACGATGAGGA AGAAGAATTTCTCTTTGTTTATTGCATATTGCAACACGTGCTTCCTCCGT CGCAAATCGCGAACAAACCCAGGTTTAGAAAACTCTAAACCTAACTCTAA CACCAAAATCAAACTATTCTCACACCTCTGTCTCACAGCCCCGGTGGAAC TTTTTTCCTCAGTGGGGATAAAGATTCCTATTGAAATCTCAATGGGGATA GAAATTCTATTGTTCCAAGGATGGTTTTGGAGTGCAGTTTTTAAGCATGG AATTTCGCATGGGGATGAAATCAAAGTCAATTTCCCAGTTGTGCTGAAAA TCAAGGGTATTTTCCCAGCGGGGACGAAATTTTTGCCTAATTCTCCAGGG GGCTGGGGTCCCAATGGGTCTGTGACACAAAAAAAAACATCTAAAGAGTC TCATTCTCATAATTTTAAAGTTCAGTATGTATGTAATAGTTTATTTCAAG TTGACGAACAGTGAATAAACTTCGAAAAATACCGTGTCAGCCTGCAATAC CGGATCAGCTATTTCATTACGTCAAAAAAATTATCTTTAGTCAATCAAGT GCCACGTATTCTGAAATAAAAAATTACGTCATTGTGCAAAAAAAAGACCC AGTCACGCAGTTTGGGGGCCTTTTACATGTTAGGCTGGTGAGTTTAACAG AGAACACCCATTTTAAAGTCTCGGTGGGGGGGGGGGGGGTTTGGGGGGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGGGGGGGGGGGTACTTAGGCAAAATGGGTGCCAGGTATGTGCGAGCCA TAAGGGTCTCATTTCTACACCCTCGAAAGTCTCTCAAAGAGGCACAAATA CCATTAAAAAAGAACTTTGAGAAAAGTCTCTCTAAGGGTGTCAAATACGC TAACTCTTCCTCTCTCTAAGGAATGGTTTTCGATTTTTGGTTCGTCTTTG GTCAAAGCCATTTTTACAAAGCAAAAGTCATGCACGTGGGTTTTCCCATT TTCCATTTTCCGAATGCCAAATGTAAGAGGATACCAGCATTTAACACGTA GTTCAAAACATACACCAAACGAGCTACAGTCTCTATTTTGATGTTTTATG ATTTCCTTTTTCGTGTTTGACCTCATCCAAAACATTCGAAAACATAAAAC AATTTAGATATCCATAAGGATATATTTCATTTTCCGATTCCTTTCTGGCG AATTGCCAAATGTAATGATTTGATACATAATTGCAAGATAATAGGGGTTT TCTCTATTTTCGTTTGCTCTCATGCTACTAGCCTTGCCAAAAAAAACTTT TTAAAGAAAGAAAAAATACACGAATTGTAGCATCAATGAGTTGGAGGAAC CGACGCCTAAACAAAACCATTCATTGCTAATATCTTGTGCAACATAGAAA TAACAGCAATCATAATTTATAATCACATTTTATCTTCAGATTGCACTCAA GTCATGAATAAAAACTACCCTGTCCAAGAATTTACTGGAGAAATTAAAGT CGACAAAACACCTGCCAACTGTTTCAGTGGAGAAAACGTTTTAACAGAAC CAATCACTTTCATGTATTTTCGACAATTCGAATGGATCGCCGAAAAAACG TTTATCACCAAGATCGAAGATTACCATGCACTGGTAAGTAAAGATCCCAT CTGGCACACAACGTTGTTTTAACGTTCAAATAACGTTATTTAGACGTTAT GAATGTCACATGGACGTTGATACGACGTAGAGTGTTGTCTGGGTTATAAA ACAAGGTTTATTATTGACTTATCGGTTGATAAGAAAAACTAAATTTAGTA CCTTATCGGCCATATTTACGCCGTCTCTAATTTATCGCCAACCCCTTTTA CGCCTACCCCCTATTACAAAAAAGCTCAATCTTTTCCAATTGTTGCCCTG CCCTAATTTAATTCCGATCCCTTACGGCGGCCCTTCTTACGCCAGTGACG AAAAGATAACGCCAATAAGGGCCAGCGTAAAAAGGCCGATGAGATATTCA TTATTCAGCTAAATTTTCACAAAAAGTTTTTGTGGGTTTTGTTTTATTTA CAATCTCGGTCAAAATAAATTGAGAATTTTGGCTAATTCCTCGTTTTCAG CAATTTAAAGTTCGGGAGAAAAAGTCGCTTTTGGGGAAATTGATAAATTT ATTCAAATATTTCAATTCGGGAGGGGTTTATAGACTTCAAGGCTATATTC TGAGCCCTATCGGACGATTCTTGGACTTTTAGTCTAAGTCCTAAGTCTTA AGTCTAGCGTTAAAACTCAGAGTTAAAACTCTAGCCGTCCAACTTAATTT AGAGCGCTTCCAAATGGTTTTTGGTTGTAAGATTTCGTGGGAATTTCCCT TTTTTCTCAAATATTATGACTTTGATTGTTACCGTGAAACGCACAGGTCA AAATCACATATTGACGCTGTGCCGACGAATCGAGATTCTATTCATTGCGC AATCAACGAAGACAAAAGTAACCATGACGACCATCCAAGATCTTGGATGA GGTTCAAAGTTGATATTTTTATTCCCATCGTTGAAAACACAACAACAAAA GCGACAAAATAAAAAATCAAACTTTGAAAGCAAAATTTGAAAAAAAATTC TACCGTGGTATAATAGCCATGGTATATCAGGAATTATTCAATGGCTGTTT TTGACTACAGGTATATAATAATAAACGAAAACCTATTGAATATATGTTTT ATTATATACCTAGAGGCAAAAACAAAACATTAATTATGTCGATAGTTAAA TGTTTCACTTAAAACACTCCCATAATCGAACGTTCGAACGTTTTTCTTTT TTAATGATTTTCTTAATTACTTTGAGTCATTAAATTTGTTCATGAGATTG ACAATAGATTTATTTTAATGAATTTCTTTGATAACAACAAAAGCGACAAA ATAAAAAATCAAACTTTGAAAGCAAAATTTGAAAAAAAATTCTACCGTGG TATAATAGCCATGGTATATCAGGAATTATTCAATGGCTGTTTTTGACTAC AGGTATATAATAATTACTGTTATACATTTGGGGATCATGTAAAAGATTTC TTTCGAAAGAAACTCACTTCGATTACACATGGAGGTTTCTGGGGAATTCG TAAATAGTAAACTGCATACTGCCCGGGGGGGTTACTTAGGCAAAATGGGT GCCGGGTATGTGCGAGCCAAAAGGGTACCTTTTCTCATTCCTCAAAAGTC TCTCAAAGGGGTACAAATTCAAAAGTTAGTCTCTGAAAGGGTCCCAAAAT CACAAAAATTAAAAATTTCTCTCTCAAAGGGTCACGATTTCCAAGAATTT TGACCAAAATTTGGTGAAAATCAAACCAAAATTTGGAAAAAATGGACCAA AATTTAGGAAAAAGTCTNTGACGACCATCCAAGATCTTGGATGAAGTTCA AAGTTGATATTTCTATTCTCATCGTTGAAGACGTAACTCAAAAATGTCAT CAATGCTTTTTAAAAACAGTCAGTGATAGATAATTGTAACATAAAGTGTG CCTATTATTTCGATTTAATTAAAGTGACATTTCCATAATTGAGAGTTTAG TAATTACTGTTAAACATTTCGGAATCATGTAAAACATTTTTTTCGAAAGA AACTCATTTTAATTACACTTGGAGGTTTCTGGAGAGTTCGTAAATAGTAA ACTGCATACTGATACAGTCTGCTAGACATTAATGAGGTAATATTTGCTCT TCATCTTTGATTCTTTCTACAGTGATTAGATTGACACATGCGCGATAAAA TTTCTATTATTGGTCTTCAGAGGTTAATATATTCTTTGAAAACTTAACCT CTGATACTCAGGGTATTTGATTAGATTTGAATTTCTTATAGTACTTGACA TAGATTTTCGCCAAAAGAATATACCTATATATATCTTTAGATAATCTTCA TTCTCGTTTTTTATGCAAGACCCTTTAATTTCTTTCAAGAATCTTGCCAA GATGTTACATCTTGATCATTTTTAGATATTTGAAGTACTTTCAAGATTTT ATCAAGAATTTTTATTTCTTGCTATAAATTAAAACTCGAAATAACATATA TAATTCATCGATTTTTCATTAAATTTTAGATCAAACTACCACTCAGTACC CCCGCTGGTCACCTCAAAGGACATTTTATCAAACTGGAGATAGAATGCGA GGGGAAAATTGAACGTTTGTTTACCAAGCTAGAAGGCGTCAGTAAGTCAT AAACCTTGAAGTTTATTTTTGAATATAAAGACATTTCTGAGTTACTGTAT GTCTTTTTGACTTACTAGAAATGTAGATTCGAATATTGTCCATGGAAGGC TGAAAGATAAATCAAATTTTATTAGAAAATATATTCAAGTCCTGTTGCAA ACGGCAAACTTAAAAATATATGAATTCCATTTCCCATGGTTTTTTAGCTT CTTCTCAAAAGGCCTAACAAAGAGCCTTCAGCAAAAATTTCCATCACCCT CTGGATCTTACGAAGTACATATGTTCTGGACATGTCAATTTTTCTTGTTT AGTGGGCCATTTAATTGTCCCTTTTCTAAGTCTCAAAATTTTCTTTTTTC AGTGACCATCACAGATCCTCTAGCAGTCAACTCAAAGATCACACCGAAAC CTCCGATCACCAACGGGACCTCAACAACAACCACTACAACTAAATCACCG ACCACCCTTCAACCTAATATAAACAACACTGTAACCATAACCAACGGAAA TGCAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATACTCTTCAAC CTCCGAGAAATGAAACAATAAACACACAAATAATAACTACAGAATCGGTG ATCAAAGAAACCCCACATACAACACATTCAACAACAATCAAACCAAACAA TTCACCAAGACTTCCAACAACCAAAAACACGACAACTGTTATTACTCCAA AAAATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTACCTTCCGAA GCAAACGCAACAGAATCACCGAAGACAACAAGAAGAAGAGCTAGAACAAC CCCTCCCCGACCAAATAAACCAACAACTCCCACAACTCCAAACTGGCTTA TAAAAACAAAAACAAACGCGACAAAGTCCACTCTTCGCAACACAAAAACA AAAGAG

Coding sequence (CDS) from alignment at sc0000608:40165..49270-

>TCONS_00027169 ID=TCONS_00027169|Name=TCONS_00027169|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at sc0000608:40165..49270- (Clytia hemisphaerica)
TGACCATCACAGATCCTCTAGCAGTCAACTCAAAGATCACACCGAAACCT
CCGATCACCAACGGGACCTCAACAACAACCACTACAACTAAATCACCGAC
CACCCTTCAACCTAATATAAACAACACTGTAACCATAACCAACGGAAATG
CAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATACTCTTCAACCT
CCGAGAAATGAAACAATAAACACACAAATAATAACTACAGAATCGGTGAT
CAAAGAAACCCCACATACAACACATTCAACAACAATCAAACCAAACAATT
CACCAAGACTTCCAACAACCAAAAACACGACAACTGTTATTACTCCAAAA
AATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTACCTTCCGAAGC
AAACGCAACAGAATCACCGAAGACAACAAGAAGAAGAGCTAGAACAACCC
CTCCCCGACCAAATAAACCAACAACTCCCACAACTCCAAACTGGCTTATA
AAAACAAAAACAAACGCGACAAAGTCCACTCTTCGCAACACAAAAACAAA
AGAGATCAAACTACCACTCAGTACCCCCGCTGGTCACCTCAAAGGACATT
TTATCAAACTGGAGATAGAATGCGAGGGGAAAATTGAACGTTTGTTTACC
AAGCTAGAAGGCGTCAATTGCACTCAAGTCATGAATAAAAACTACCCTGT
CCAAGAATTTACTGGAGAAATTAAAGTCGACAAAACACCTGCCAACTGTT
TCAGTGGAGAAAACGTTTTAACAGAACCAATCACTTTCATGTATTTTCGA
CAATTCGAATGGATCGCCGAAAAAACGTTTATCACCAAGATCGAAGATTA
CCATGCACTGATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAA
GACGTTATACAGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGT
GGTGAGAGTGTACAAGACTGGTATATTAACAAGACTACAGGATTATGTGA
ATGCATGAGAAACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTG
GTTGTGTTAGAAGCCAATCTGCTTGCCAAGTGACCATCACAGATCCTCTA
GCAGTCAACTCAAAGATCACACCGAAACCTCCGATCACCAACGGGACCTC
AACAACAACCACTACAACTAAATCACCGACCACCCTTCAACCTAATATAA
ACAACACTGTAACCATAACCAACGGAAATGCAAAGACCAATGATTCAAAA
ACTCAATCACCAGTGTATACTCTTCAACCTCCGAGAAATGAAACAATAAA
CACACAAATAATAACTACAGAATCGGTGATCAAAGAAACCCCACATACAA
CACATTCAACAACAATCAAACCAAACAATTCACCAAGACTTCCAACAACC
AAAAACACGACAACTGTTATTACTCCAAAAAATCCTTACGCTAAAGCAAC
TCCAATACCGAACATTCTACCTTCCGAAGCAAACGCAACAGAATCACCGA
AGACAACAAGAAGAAGAGCTAGAACAACCCCTCCCCGACCAAATAAACCA
ACAACTCCCACAACTCCAAACTGGCTTATAAAAACAAAAACAAACGCGAC
AAAGTCCACTCTTCGCAACACAAAAACAAAAGAGATCAAACTACCACTCA
GTACCCCCGCTGGTCACCTCAAAGGACATTTTATCAAACTGGAGATAGAA
TGCGAGGGGAAAATTGAACGTTTGTTTACCAAGCTAGAAGGCGTCAATTG
CACTCAAGTCATGAATAAAAACTACCCTGTCCAAGAATTTACTGGAGAAA
TTAAAGTCGACAAAACACCTGCCAACTGTTTCAGTGGAGAAAACGTTTTA
ACAGAACCAATCACTTTCATGTATTTTCGACAATTCGAATGGATCGCCGA
AAAAACGTTTATCACCAAGATCGAAGATTACCATGCACTGATGATTACAA
GTGTAACATGTAATACATGGGTTATTGAAAGACGTTATACAGGAGATATA
ATACGTAATATACCAGCGAATTTTAAGTGTGGTGAGAGTGTACAAGACTG
GTATATTAACAAGACTACAGGATTATGTGAATGCATGAGAAACACACCGA
CATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTGTTAGAAGCCAATCT
GCTTGCCAAGTGACCATCACAGATCCTCTAGCAGTCAACTCAAAGATCAC
ACCGAAACCTCCGATCACCAACGGGACCTCAACAACAACCACTACAACTA
AATCACCGACCACCCTTCAACCTAATATAAACAACACTGTAACCATAACC
AACGGAAATGCAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATAC
TCTTCAACCTCCGAGAAATGAAACAATAAACACACAAATAATAACTACAG
AATCGGTGATCAAAGAAACCCCACATACAACACATTCAACAACAATCAAA
CCAAACAATTCACCAAGACTTCCAACAACCAAAAACACGACAACTGTTAT
TACTCCAAAAAATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTAC
CTTCCGAAGCAAACGCAACAGAATCACCGAAGACAACAAGAAGAAGAGCT
AGAACAACCCCTCCCCGACCAAATAAACCAACAACTCCCACAACTCCAAA
CTGGCTTATAAAAACAAAAACAAACGCGACAAAGTCCACTCTTCGCAACA
CAAAAACAAAAGAGATCAAACTACCACTCAGTACCCCCGCTGGTCACCTC
AAAGGACATTTTATCAAACTGGAGATAGAATGCGAGGGGAAAATTGAACG
TTTGTTTACCAAGCTAGAAGGCGTCAATTGCACTCAAGTCATGAATAAAA
ACTACCCTGTCCAAGAATTTACTGGAGAAATTAAAGTCGACAAAACACCT
GCCAACTGTTTCAGTGGAGAAAACGTTTTAACAGAACCAATCACTTTCAT
GTATTTTCGACAATTCGAATGGATCGCCGAAAAAACGTTTATCACCAAGA
TCGAAGATTACCATGCACTGATGATTACAAGTGTAACATGTAATACATGG
GTTATTGAAAGACGTTATACAGGAGATATAATACGTAATATACCAGCGAA
TTTTAAGTGTGGTGAGAGTGTACAAGACTGGTATATTAACAAGACTACAG
GATTATGTGAATGCATGAGAAACACACCGACATTTGTCGTTTATGGTGAT
GGAAGCTTTGGTTGTGTTAGAAGCCAATCTGCTTGCCAAGTGACCATCAC
AGATCCTCTAGCAGTCAACTCAAAGATCACACCGAAACCTCCGATCACCA
ACGGGACCTCAACAACAACCACTACAACTAAATCACCGACCACCCTTCAA
CCTAATATAAACAACACTGTAACCATAACCAACGGAAATGCAAAGACCAA
TGATTCAAAAACTCAATCACCAGTGTATACTCTTCAACCTCCGAGAAATG
AAACAATAAACACACAAATAATAACTACAGAATCGGTGATCAAAGAAACC
CCACATACAACACATTCAACAACAATCAAACCAAACAATTCACCAAGACT
TCCAACAACCAAAAACACGACAACTGTTATTACTCCAAAAAATCCTTACG
CTAAAGCAACTCCAATACCGAACATTCTACCTTCCGAAGCAAACGCAACA
GAATCACCGAAGACAACAAGAAGAAGAGCTAGAACAACCCCTCCCCGACC
AAATAAACCAACAACTCCCACAACTCCAAACTGGCTTATAAAAACAAAAA
CAAACGCGACAAAGTCCACTCTTCGCAACACAAAAACAAAAGAGATCAAA
CTACCACTCAGTACCCCCGCTGGTCACCTCAAAGGACATTTTATCAAACT
GGAGATAGAATGCGAGGGGAAAATTGAACGTTTGTTTACCAAGCTAGAAG
GCGTCAATTGCACTCAAGTCATGAATAAAAACTACCCTGTCCAAGAATTT
ACTGGAGAAATTAAAGTCGACAAAACACCTGCCAACTGTTTCAGTGGAGA
AAACGTTTTAACAGAACCAATCACTTTCATGTATTTTCGACAATTCGAAT
GGATCGCCGAAAAAACGTTTATCACCAAGATCGAAGATTACCATGCACTG
ATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAAGACGTTATAC
AGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGTGGTGAGAGTG
TACAAGACTGGTATATTAACAAGACTACAGGATTATGTGAATGCATGAGA
AACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTGTTAG
AAGCCAATCTGCTTGCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015275XLOC_015275Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027169-exon-sc0000608-1575043694:48647..49270TCONS_00027169-exon-sc0000608-1575043694:48647..49270Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1575043694:43638..43831TCONS_00027169-exon-sc0000608-1575043694:43638..43831Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1575043694:41080..41191TCONS_00027169-exon-sc0000608-1575043694:41080..41191Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1575043694:40165..40718TCONS_00027169-exon-sc0000608-1575043694:40165..40718Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1510915933:48647..49270TCONS_00027169-exon-sc0000608-1510915933:48647..49270Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1510915933:43638..43831TCONS_00027169-exon-sc0000608-1510915933:43638..43831Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1510915933:41080..41191TCONS_00027169-exon-sc0000608-1510915933:41080..41191Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1510915933:40165..40718TCONS_00027169-exon-sc0000608-1510915933:40165..40718Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1491911889:48647..49270TCONS_00027169-exon-sc0000608-1491911889:48647..49270Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1491911889:43638..43831TCONS_00027169-exon-sc0000608-1491911889:43638..43831Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1491911889:41080..41191TCONS_00027169-exon-sc0000608-1491911889:41080..41191Clytia hemisphaericaexon
TCONS_00027169-exon-sc0000608-1491911889:40165..40718TCONS_00027169-exon-sc0000608-1491911889:40165..40718Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027169-proteinTCONS_00027169-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000608supercontigsc0000608:40165..49270 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0375245 0.177914 0.107323 0 0 0.0580887 0 0.0185317 0.166554 0.28828 3.93428 1.33954 0.0208886 0.0856407 0 0 0.0538069 0.118103 0.191426 0.435086 0 0 0.0763091 0.0407195 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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