TCONS_00027141 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027141
Unique NameTCONS_00027141
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1808

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027141 ID=TCONS_00027141|Name=TCONS_00027141|organism=Clytia hemisphaerica|type=transcript|length=1808bp
aaaaaaaaacaccaaaaatgatACTCAATTTTACTATTTAAGAATCCAAG
AAAAGTGATATCCACTGACCAAAATATAATGGCTCTACACTGCAAGAAAC
CATTTTTACCATCAAGCATACAAAAACTGGTCGATAAAGATGAAATATTG
GACACTTGTCAAGATACTTTTCACTACGGATCTAATAACGGATTCGATAG
CTCAGGATgctacttttcaatatatttccaACGAGGTCTTGGACTTAGCA
GAGATTACGATGGATGTAAAGTGATGTTGTATCGATTTGAAAACGATGAA
GAAAAGATAGGTACTTGTTATATAAATCTGTACCGTTCACCGAAAGTCCT
CCAAATTTCAACCCGTTTGATCCACCCGAAGATGCAGAAGAAAGTGATTA
CGTCACTCAAAAACTTGAATACGACGTTGTTACAATGCGTTGGTTCAACG
TTGAAAAGACGTCCAAAGATGACGGGGACCACCAACTCACTGTTTACAGT
AGCTGTTTGAGACCTCTGTACGAAAACGGTGGCAAAAAGACGATCAATGT
TGAGAAAGCTGATGATGGCAATGATGTACTTGTGCTTTCGTATCCTAATA
TCCAAAAGTTTCTGGGAGCTGATATTAATAATatgGTTTGTGGCAATTTT
CTGGTACTGATGGTAACTCCTGATGAAGCAAATTTCATTGTTGATCTGAT
CAAGTTCGATGACAAAGAAATCTTCCATTTCAAACGTCTAACAGCTCGAG
GAGATTACACTGTATACAACCCTTTGTCTTTCGGCTTACCAAGCAAAGTA
TATCTGGACATGGAATGGCAAAGGTTTTACGTAATGAGTAATTATGAGTT
ATATTGCTACGATTTTAACGGTGAAAAGATCTTCGACGGTAGCATTCGCA
ATTACGAAGTTGACAAAATGGTTATTGAGAAGACGATGCAAGTTTCGAAC
AGAGTCTTCATCACCGCCATTTCCCCACCCCAATTTCCCATGGATACAAT
TAGACTGATCGAGATCACCCGAAACGAAATAAAACTTGGCGATTGCATTA
AGCTTTCAAGCAGCAAGTATAACTTCATGCATAAATATATTTGGGTCCAG
AGATATCTCGGTAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATAC
CAATTGTTTCTTCAGCGTTAATGCGTATGATTTGCAAACGGGTGGAGAAG
CagttttatacaaatttgaagAACCATTTTATGGAGATTGTTATTTGAAT
TGGAATATGAGAGAATTGGCATTAGTTACAGAATTGGATGATGAAGAGAG
AATCAAACGTCTTTGTGTTGAAAGAATTCCCTTCTTTATGAACTCGGAGT
CGAATTGTTGTTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAATAAT
TTCCATGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATT
TCTTGACATATTGTAGTAATTTGTGGTTATCCCTATAGCTTTTCATACAG
GATACAGGAGGTTGGAATAAATCCTACCCGGGCACCATGCCACGATAGAA
CAGAAGACTATGGAAAATTAAAAAGCATCTTTCGAAACGTTCACtcattg
attttaattttgcatCATCTGAGGTAATTCACTCCAAACATTTTTGACGA
CGTCATGCATCTTCACACTTACCATTTTTTGTACATGTAATTACTTTTTT
AGAGCttacatttttataagataaTGATAATGATTTTTTTAGCCCTGGGT
GACTCAAAATATATTGTCTACATACGTTCTATGTGCTAAAAATACATTCT
GTCCTAAG
Run BLAST on NCBI

protein sequence of TCONS_00027141-protein

>TCONS_00027141-protein ID=TCONS_00027141-protein|Name=TCONS_00027141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MRWFNVEKTSKDDGDHQLTVYSSCLRPLYENGGKKTINVEKADDGNDVLV
LSYPNIQKFLGADINNMVCGNFLVLMVTPDEANFIVDLIKFDDKEIFHFK
RLTARGDYTVYNPLSFGLPSKVYLDMEWQRFYVMSNYELYCYDFNGEKIF
DGSIRNYEVDKMVIEKTMQVSNRVFITAISPPQFPMDTIRLIEITRNEIK
LGDCIKLSSSKYNFMHKYIWVQRYLGKQYFCWLEARPNTNCFFSVNAYDL
QTGGEAVLYKFEEPFYGDCYLNWNMRELALVTELDDEERIKRLCVERIPF
FMNSESNCCSLKEQARFVCLNNFHEGYLCQKLPKDLLRFLDIL
Run BLAST on NCBI

transcript from alignment at sc0000607:140303..146155-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027141 ID=TCONS_00027141|Name=TCONS_00027141|organism=Clytia hemisphaerica|type=transcript|length=5853bp|location=Sequence derived from alignment at sc0000607:140303..146155- (Clytia hemisphaerica)
AAAAAAAAACACCAAAAATGATACTCAATTTTACTATTTAAGAATCCAAG
AAAAGTGATATCCACTGACCAAAATATAATGGCTCTACACTGCAAGAAAC
CATTTTTACCATCAAGCATACAAAAACTGGTCGATAAAGATGAAATATTG
GACACTTGTCAAGATACTTTTCACTACGGATCTAATAACGGATTCGATAG
CTCAGGATGCTACTTTTCAATATATTTCCAACGAGGTCTTGGACTTAGCA
GAGATTACGATGGATGTAAAGTGATGTTGTATCGATTTGAAAACGATGAA
GAAAAGATAGGTGTAAGTGTAACGATTTCTTGGTTATTGCAGTGGAGTTT
CCACAACTAGAACATGCACGGGGGACATTAATTTGTTCGTGTTAAGGAAA
CTTCGACTTATGGAGTATAATGTGAGACCAGAAAACTTGTTCGAGTTAAG
GAGACCTTTGAGTTATAGAGGTTCGAGATAAAGAAACTCTGTTGTATCTT
CAAAATTATTTGTTCTCATTTTTTGTTTCAATAAGTTAGGAAAAAGAGGG
AAACTTAGGTAAAACGAGGATAAATTAAACGTGAACAACACGTTTGGTTG
AAAAAGATGAATTAGGATAAAACATTGATGACGTAGGTGAAAAGAAGGTA
AGTTGGGTAAAAAGAGAATTCTAGCTTGTTATAACTTCTTTTAGACTTGT
TATATAAATCTGTACCGTTCACCGAAAGTCCTCCAAATTTCAACCCGTTT
GATCCACCCGAAGATGCAGAAGAAAGTGATTACGTCACTCAAAAACTTGA
ATACGACGTTGTTACAATGCGTTGGTTCAACGTTGAAAAGACGTCCAAAG
ATGACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTGAGACCTCTG
TACGAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGCTGATGATGG
CAATGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGTTTCTGGGAG
CTGATATTAATAATGTAGGTAATGATTTCAATGATAAGGTTATATAAACT
TCACTTTTCTGTTTTAAAGTGTTCACTTTATACATTTTTCGTCCTTTGAT
TTGGAACGAATTGAGTCTTCTTCATTCATTAGTATGGCAAAAATGATAAT
ATTTTGAAGTAGCTTATTCTTCCTGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
AAACATATCAGCGTGAAATTGCTTCACTTTTTAACGCCACTACACGGATT
TCGAATTAAGATTTTTTTGTAACTACAACTTTCTGCATATTTCCATATTT
TTTTTTACAGATGGTTTGTGGCAATTTTCTGGTACTGATGGTAACTCCTG
ATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGACAAAGAAATC
TTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGTATACAACCC
TTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGGAATGGCAAA
GGTTTTACGTAATGAGTAATTATGAGTTATATTGCTACGATTTTAACGGT
GAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAGTAAGAATGATTTA
TCTTATTTTCTTGTGTTTTAAAGCGATTATATTTTAGGCCAGCAATTGAT
GCTTTAAAACGTTTTTTGGCTTTTCGTTAAAAAAACAGTTTGAGAACCAT
TTCCACAAGGTTTAAGGGTCCAATGCCCAGATATATCTAATATAAAATAC
CCCTACATAGCGCTGTAGTCAAGCCACGGTAGTTGAAGCAAAATAATACA
GCAGTACAGTAGACCACAGTAGTAGACCACAGTTCGGTACCGGTAAATTG
TTCAATCAGAGCAAAACAACTGACGAGACGAGAAACTTGATTGATCAAAT
TGTCCGCATCAAACTGGTCTTCTCATAAAGATAGTTATTACTTTGCTTCG
GTGAGGGAAAGAGTAGCTTCATCTATTGTTTTATAAAATATATGTGGTCG
AATATCGCCAAAACAGCACTAATCCTCATAACGGCTTACCGTCTTAGACG
TTAAATACACCCAAAATCTTAGAAAAAACAGAAAGTCATTAACCAGAGCG
CGGGGGTCCTGATTACCAATGCTTCCTTTTGACCTTAAAATGGTCAATGA
AGGAGCCAATGACCAAACATGTGACGTCATTTGAAACTTTTTGGAAAGGC
GTGAAAATCGCAGATGTCTTTTATAGAACACTGAACTAGATAGAGCTTCT
CTGTCCCTGGCTGAAGCAATATAATACAACCTCTCAGTAGACCAAAGTTT
GGTACCGGCAATTTTTTCAATAAAGATCATTCTCTCGTCTCATCGTTTCC
CGTCTCGTCAGTTGTTTTGTTCTGATTGAACAAATAGCCGGTACCGAAAT
GCGGTCTAACACTGTAGTGTGCTTTACTCTTTCATTATCTTGCTTAAACT
GGTTAACTTGAGAAAAAACAGAGTGGAACTGTTGTATCTGGTGTTTTATC
CGAGATATCAGAATGTCAGTTACTACTGGGGGTGACAATTGTTATAGCAG
TTTAAATTTGATGCCCTTATGGAAGGGAAGAAAGCCACTGATCCAAATTT
TGCATTAGGTTGACAGGTGTTTTTAGGTTAGGTGTTTTATCCGAGATTTC
AGAATGTCAGTTACTACTGGCGGGAATGACAAATGTTATAGCAGTTTACA
TTTGATGCCCTTATGGAAGGGAAGAAAGCCACTGATCCAATTTTTGCATT
AGGATGACAGGTGTTTTTAGCTTAGGTGCTTCATCCAAGATTTCAGAATG
TCAGTTACTACTGGCGGGAATGACAAATGTTATAGCAGTTTAAATTTGAT
GCCCTTATGGAAGGGAAGAAAGCCACTGATCCAATTTTTGCATTAGGTTG
ACAGGTGTTTTTAGGTTAGGTGCTTTATCCAAGATTTCAGAATGTCAGTT
ACTACTGGCGGGAATGACAAATGTTATAGCAGTTTAAATTTGATGCCCTT
ATGAAAGGGAAGAAAGCCACTGATCCAATTTTTGCATTAGGTTGACAGGT
GTTTTTAGGTTAGGTGCTTTATCCAAGATTTCAGAATGTCAGTTACTACT
GGCGGGAATGACAAATGTTATAGCAGTTTAAATTTGATGCCCTTATGAAA
GGGAAGAAAGCCACTGATCCAATTTTTGCATTAGGTTGACAGGTGTTTTT
AGGTTAGGTGCTTTATCCAAGATTTCAGAATGTCAGTTACTACTGGCGGG
AATGACAAATGTTATAGCAGTTTAAATTTGATGCCCTTATGGAAGGGAAG
AAAGCCACTGATCCAATTTTTGCATTAGGTTGACAGGTGTTTTTAGGTTA
GGTGCTTTATCCAAGATTTCAGAATGTCAGTTACTACTGGCGGGAATGAC
AAATGTTATAGCAGTTTAAATTTGATGCCCTTATGGAAGGGAAGAAAGCC
ACTGATCCAATTTTTGCATTAGGTTGACAGGTGTTTTTAGGTTAGGTGCT
TTATCCAAGATTTCAGAATGTCAGTTACTACTGGCGGGAATGACAAATGT
TATAGCAGTTTACATTTGATGCCCTTATGAAAGGGAAGAAAGCCACTGAT
CCAATTTTTGCATTAGGTTGACAGGTGTTTTAGGTTATAGGTGTTTTATC
CGAGATTTCAGAATTTCAGTTACTACTGGGGATGACAATTGTTATAGCAG
TTTAAATTTGATGCCCTTATGGAAGGGAAGAAAGCCACTGATCCAATTTT
TGCATTAGGTTGACAGGTGTTTTTAGGTTAGGTGTTTTATCCGAGATTTC
AGAATTTCAGTTACTACTGGGGATGACAATTGTTATAGCACTGGGATCCC
CACTCCTCCTAAAATTCCTAAAAATCCTACAATAAGTCAAAACTCCTATA
ATCCTCCTAAAACTCAACAAATTCTCCTAAATTCCTAAAATCTGAAAACT
TTATCAAGCACGATGGTAGCTGATTATGTTTGTATATTTGTATAATCAGA
CAAGAAACTAAGATTTTTTTCTCATCAAAGTCAAAACAAGCTGGGAGTAG
TAAGCTACCTGACCTTGTAACAACATGTTTAAAATATATTTTTGCACTGA
AATATTTGGAACAAAAGCCTATGTTTATTGAAAGAGTGCAGACTTTATTC
AACAAAGAAGGCTCAAATGTTTAAGAGCAAGGTTTGGTGGTTTGCGCCCT
CATCTGTGAATTTTTCACTTGAGCACCCCCCTGAACTTAGGGGGGGCTAA
ACCATTTTTGCTTGATTGGGGGCTGTATTTAAAAAAAAAATACTGGGGCT
AGCTTGCTAGGGGGCTGAGTGTTAAGTAGTAGAACTGGGGTCAGAGCTGA
TAGGTTACAAATATTTTAATTTATGCTAAAAATCTATGTTGTGGGGAAGG
TTTTGACCCCTCTTAGAAAAAATTTTTGCCTGCGGTGCAATAAATTTATT
AAGAATTTGCATATAAGATTTCTATGATATTTTGTTTTGTGAAAGTGGAG
GCTAAGTTTTAAGAGTTTTTCTGGGGCCTTTTTCCTTAGTCTCCCCCCTG
AAAAATGCTGGGGGCTGGACCCCTCTGCACACTACTATGACATAGGCTTT
GTTAGAACGAATAATATGATAAGTAAAGTAATTTTATTTCAGTCTTCCTG
TGGGTGATTTTTTTTTCGGCAGAACATCTTTCTAATGGCTGACTTCAGGT
CGATTTTAGAAATTTATTTCTTAAATTTTCCTAAAATGCTCCTAAAAAAT
TGAAATTCTTCTAAAACTCTCCTAAAATTTGGCCAAAATCCTCCTAAAAT
TTGTCCCAAAATTAAAATAGTCAGGCGTGGGATCCCTGTAAGCAGTTTAA
ATTCGATGCCCTTATGGAAGGGAAGAAACCCACTGATTCAATTTTTGCAT
TAGGTTGACAAAATGGTTATTGAGAAGACGATGCAAGTTTCGAACAGAGT
CTTCATCACCGCCATTTCCCCACCCCAATTTCCCATGGATACAATTAGAC
TGATCGAGATCACCCGAAACGAAATAAAACTTGGCGATTGCATTAAGCTT
TCAAGCAGCAAGTATAACTTCATGCATAAATATATTTGGGTCCAGAGATA
TCTCGGTAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATACCAATT
GTTTCTTCAGCGTTAATGCGTATGATTTGCAAACGGGTGGAGAAGCAGTT
TTATACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAATTGGAA
TATGAGAGAATTGGCATTAGTTACAGAATTGGATGATGAAGAGAGAATCA
AACGTCTTTGTGTTGAAAGAATTCCCTTCTTTATGAACTCGGAGTCGAAT
TGTTGTTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAATAATTTCCA
TGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATTTCTTG
ACATATTGTAGTAATTTGTGGTTATCCCTATAGCTTTTCATACAGGATAC
AGGAGGTTGGAATAAATCCTACCCGGGCACCATGCCACGATAGAACAGAA
GACTATGGAAAATTAAAAAGCATCTTTCGAAACGTTCACTCATTGATTTT
AATTTTGCATCATCTGAGGTAATTCACTCCAAACATTTTTGACGACGTCA
TGCATCTTCACACTTACCATTTTTTGTACATGTAATTACTTTTTTAGAGC
TTACATTTTTATAAGATAATGATAATGATTTTTTTAGCCCTGGGTGACTC
AAAATATATTGTCTACATACGTTCTATGTGCTAAAAATACATTCTGTCCT
AAG

Coding sequence (CDS) from alignment at sc0000607:140303..146155-

>TCONS_00027141 ID=TCONS_00027141|Name=TCONS_00027141|organism=Clytia hemisphaerica|type=CDS|length=3096bp|location=Sequence derived from alignment at sc0000607:140303..146155- (Clytia hemisphaerica)
GTTGACAAAATGGTTATTGAGAAGACGATGCAAGTTTCGAACAGAGTCTT
CATCACCGCCATTTCCCCACCCCAATTTCCCATGGATACAATTAGACTGA
TCGAGATCACCCGAAACGAAATAAAACTTGGCGATTGCATTAAGCTTTCA
AGCAGCAAGTATAACTTCATGCATAAATATATTTGGGTCCAGAGATATCT
CGGTAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATACCAATTGTT
TCTTCAGCGTTAATGCGTATGATTTGCAAACGGGTGGAGAAGCAGTTTTA
TACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAATTGGAATAT
GAGAGAATTGGCATTAGTTACAGAATTGGATGATGAAGAGAGAATCAAAC
GTCTTTGTGTTGAAAGAATTCCCTTCTTTATGAACTCGGAGTCGAATTGT
TGTTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAATAATTTCCATGA
AGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATTTCTTGACA
TATTGTAGATGGTTTGTGGCAATTTTCTGGTACTGATGGTAACTCCTGAT
GAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGACAAAGAAATCTT
CCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGTATACAACCCTT
TGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGGAATGGCAAAGG
TTTTACGTAATGAGTAATTATGAGTTATATTGCTACGATTTTAACGGTGA
AAAGATCTTCGACGGTAGCATTCGCAATTACGAAATGCGTTGGTTCAACG
TTGAAAAGACGTCCAAAGATGACGGGGACCACCAACTCACTGTTTACAGT
AGCTGTTTGAGACCTCTGTACGAAAACGGTGGCAAAAAGACGATCAATGT
TGAGAAAGCTGATGATGGCAATGATGTACTTGTGCTTTCGTATCCTAATA
TCCAAAAGTTTCTGGGAGCTGATATTAATAATGTTGACAAAATGGTTATT
GAGAAGACGATGCAAGTTTCGAACAGAGTCTTCATCACCGCCATTTCCCC
ACCCCAATTTCCCATGGATACAATTAGACTGATCGAGATCACCCGAAACG
AAATAAAACTTGGCGATTGCATTAAGCTTTCAAGCAGCAAGTATAACTTC
ATGCATAAATATATTTGGGTCCAGAGATATCTCGGTAAACAATATTTCTG
TTGGCTTGAAGCTCGACCAAATACCAATTGTTTCTTCAGCGTTAATGCGT
ATGATTTGCAAACGGGTGGAGAAGCAGTTTTATACAAATTTGAAGAACCA
TTTTATGGAGATTGTTATTTGAATTGGAATATGAGAGAATTGGCATTAGT
TACAGAATTGGATGATGAAGAGAGAATCAAACGTCTTTGTGTTGAAAGAA
TTCCCTTCTTTATGAACTCGGAGTCGAATTGTTGTTCTCTCAAAGAACAA
GCACGTTTTGTTTGCTTGAATAATTTCCATGAAGGTTATCTGTGTCAAAA
ACTTCCGAAAGATCTTTTACGATTTCTTGACATATTGTAGATGGTTTGTG
GCAATTTTCTGGTACTGATGGTAACTCCTGATGAAGCAAATTTCATTGTT
GATCTGATCAAGTTCGATGACAAAGAAATCTTCCATTTCAAACGTCTAAC
AGCTCGAGGAGATTACACTGTATACAACCCTTTGTCTTTCGGCTTACCAA
GCAAAGTATATCTGGACATGGAATGGCAAAGGTTTTACGTAATGAGTAAT
TATGAGTTATATTGCTACGATTTTAACGGTGAAAAGATCTTCGACGGTAG
CATTCGCAATTACGAAATGCGTTGGTTCAACGTTGAAAAGACGTCCAAAG
ATGACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTGAGACCTCTG
TACGAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGCTGATGATGG
CAATGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGTTTCTGGGAG
CTGATATTAATAATGTTGACAAAATGGTTATTGAGAAGACGATGCAAGTT
TCGAACAGAGTCTTCATCACCGCCATTTCCCCACCCCAATTTCCCATGGA
TACAATTAGACTGATCGAGATCACCCGAAACGAAATAAAACTTGGCGATT
GCATTAAGCTTTCAAGCAGCAAGTATAACTTCATGCATAAATATATTTGG
GTCCAGAGATATCTCGGTAAACAATATTTCTGTTGGCTTGAAGCTCGACC
AAATACCAATTGTTTCTTCAGCGTTAATGCGTATGATTTGCAAACGGGTG
GAGAAGCAGTTTTATACAAATTTGAAGAACCATTTTATGGAGATTGTTAT
TTGAATTGGAATATGAGAGAATTGGCATTAGTTACAGAATTGGATGATGA
AGAGAGAATCAAACGTCTTTGTGTTGAAAGAATTCCCTTCTTTATGAACT
CGGAGTCGAATTGTTGTTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTG
AATAATTTCCATGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTT
ACGATTTCTTGACATATTGTAGATGGTTTGTGGCAATTTTCTGGTACTGA
TGGTAACTCCTGATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGAT
GACAAAGAAATCTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACAC
TGTATACAACCCTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACA
TGGAATGGCAAAGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTAC
GATTTTAACGGTGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAAT
GCGTTGGTTCAACGTTGAAAAGACGTCCAAAGATGACGGGGACCACCAAC
TCACTGTTTACAGTAGCTGTTTGAGACCTCTGTACGAAAACGGTGGCAAA
AAGACGATCAATGTTGAGAAAGCTGATGATGGCAATGATGTACTTGTGCT
TTCGTATCCTAATATCCAAAAGTTTCTGGGAGCTGATATTAATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015253XLOC_015253Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027141-proteinTCONS_00027141-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027141-exon-sc0000607-1575043694:145844..146155TCONS_00027141-exon-sc0000607-1575043694:145844..146155Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1575043694:145142..145461TCONS_00027141-exon-sc0000607-1575043694:145142..145461Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1575043694:144520..144795TCONS_00027141-exon-sc0000607-1575043694:144520..144795Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1575043694:140303..141202TCONS_00027141-exon-sc0000607-1575043694:140303..141202Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1510915933:145844..146155TCONS_00027141-exon-sc0000607-1510915933:145844..146155Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1510915933:145142..145461TCONS_00027141-exon-sc0000607-1510915933:145142..145461Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1510915933:144520..144795TCONS_00027141-exon-sc0000607-1510915933:144520..144795Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1510915933:140303..141202TCONS_00027141-exon-sc0000607-1510915933:140303..141202Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1491911889:145844..146155TCONS_00027141-exon-sc0000607-1491911889:145844..146155Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1491911889:145142..145461TCONS_00027141-exon-sc0000607-1491911889:145142..145461Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1491911889:144520..144795TCONS_00027141-exon-sc0000607-1491911889:144520..144795Clytia hemisphaericaexon
TCONS_00027141-exon-sc0000607-1491911889:140303..141202TCONS_00027141-exon-sc0000607-1491911889:140303..141202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000607supercontigsc0000607:140303..146155 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.3147	8.15049	8.05035	5.0975	3.10091	2.66647	3.25923	2.89246	3.20271	2.69834	2.41052	2.25262	1.96335	1.32966	1.89842	3.68698	1.85812	2.47699	2.17942	2.19276	1.38577	1.61809	7.70455	7.36338	3.99067	4.18511	1.13133	1.11641	2.63148	3.12282
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027141 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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