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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00023302-protein ID=TCONS_00023302-protein|Name=TCONS_00023302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2086bp
MRMRLFRLLIYFTLVGCTLQWTLNDLYKDYVTSLKKDGKPSDSSLNAAKK
SVPSPVLTHLSLAAKKSVSSPSNHVQSKLSIQQRPLVGSRKSVATNKVNQ
GVNIAAMKKSPSPIAPKEVHSFNVVANFHRGVHPSKLAEVKPTSAIMLSQ
NQKKNAEKAKKRAGEILKAKPLMKGELGAKSVLEINPKPMASKLSNNSFE
SVKQQTHLTEPLSPQQVLMNKMSSPNIQNSMYPMVPQQTFYQKNYFNGYP
QQQYAYPMRNPSPMYPPIESTNAAFQRTPKTKAEPCIPSARNLCPTAPVD
LFMRATPKPSTAVESHNLTKPLVEQHTVESDKKGAVEINKTQTAPKVEAT
NQQPGPVGTAPSARRDVPEGLREFVEKTDKGTFNVAGVQCSSTPEMWGNR
IECDQKLSFEPLLKQLFTNGIDLNTPSRELIVPGKFDCHAFDVNRDQGFI
TFHVASRELLDVIPNHIRVSKANASVGFNYFSTPNSLNDFDISMNGMLKL
DKAARKMKVESKKPKNTCLFSITMETKDLEIPEFTKLFTDADLSQQRSEL
PPDLSTLVLSSLRSPRIEGHYDCNGAFEFVASSKSPASIFPSQPTVYIIV
QKPRLGKVVTGAICKFEDASYRSFISSILNQDFSNIPLFNDVQTDMAIGL
SRDGLYTVRDDNFKREMSPLLSNGNTIKKGLTVKSKLPIRKIVADSNSNA
FSNSSQQSYPETVLVNTEVYSNRMHIEFPDDLRIGLSGIPQLFGERNEDM
NFPRNILNMDDTDFKITGYDIDDIDKKALTIYFEAPSAMKIGSLMSLDNA
KAKLRRNEISKWDFNATGDYKLGNTTVGILLKSQDSGFLIDSDKSSIQSG
LLVDLLDKRSNVLKKEMSKHHMDDFVIDDFRVTGTLTNKNTIRFKGKPEV
FSVDDGRIEFVASEEPNRDDSLAMGVYFKQVDLDNVFGRMLDKKMSRRSW
TTGVDAGLVIGSNKNAANLGFESDDLKELKVEEGSHLQVELKRPEFSQCK
GDSLCRMLSNEMPKSSRGFIMKGGMDGGRLHLSTPIVEPLVVNKALQLSE
ASLRMNVDRHIDVSVPTTMTLPGVNVPFNGDLHVDNAGLLQLSMKSDNTW
DKPFGLRNTRFQNLSFLSSYEPGTPLPSFDVNARMYIGRDPTDETKSIEA
PAVLKINALDPTKNSFSAKLHDTSFDKIASAFGTKKPLLRFQHEAYFLED
ANLEFEPHKEAEDDSTADAPKGQIKATGRMRILGQMADYNIKFLNKNGEI
LSEIWLPDIGVNQGLMTIHAGLKSEQRSNIDSAVHNGPALLCRMDPRDNS
AVLVGKLSTLRFSRLSALKLDDDGLSGKIYATLPGGINANVSLKADYEDN
IQDSNFQTRACLPITDNVKANLFKLLHQTASQTKRTLISAEDRVSMTEKI
YETTKSMIEKHKKSSLGFIEELRGKADDMTKLRKGIRRHCVHDCGQSCMG
LPSWKKNGIEVAGHNVVGSPTWESCSRKIPDLNCITRCLGRKVIENVKAN
NKQMELQTLMESLANTKRSLQEARSLVERGRTLVDSTLNGLEKVNKEIKV
GVDISKFLNKKDSDNAIKIDGACFQDSLENAERSLVKFMVESDVDGKRRT
FDVEAALDGNLETNLADAIANQVYPGYYDFNKKLEQVKLLLSNLDGQKNA
ISRDIDEVTNGRTDSNQLRSQINWSAEEDEFRKLAFGELPRFTLSDDETL
HAFEEKSIWEIAPNNNPLYETENKKLEIKGTKKTNINPDSDNSTLCGQLR
SSVDRYQQIVNPLAEFTESFLQEKIMFYRQKNRRLADLRMIDDQIKSDCF
VENCTMEDMDNALSYLGRARDGTLKWSKVIEGQIEDQNKVALGYFANRTR
SVIEAENGMSLRRFIIRTRQTAENAIKKTNIPKKQDLGDRLQDVSKDLYS
LLIGVKTSEELSKMASKIFNMKHQIQDLKKANVPCVESIIREKLESKSGL
LHFKSKKNSTTNYLPLHHNATKSLTKDSKKHKTSILNEDDDSKYARGGQK
KHANVHPSAKPLVTRVQNIQLHHEDNKFMKAIDVRGETKSNIESGDTFVV
NQPPVPVPQNTFYGQNANLQKYGYNPYGNMYWKKKK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1506..1526 |
| None | No IPR available | GENE3D | 1.20.1170.10 | | coord: 1336..1948
e-value: 6.7E-4
score: 18.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 344..367 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1973..2004 |
Blast
The following BLAST results are available for this feature:
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