TCONS_00022948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022948-protein
Unique NameTCONS_00022948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022948-protein ID=TCONS_00022948-protein|Name=TCONS_00022948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
LDAIDVLYIKKKKDEEDCQSEIFLFRRLGTFVGWNVQENEIHKLRQVFQE
FELSPYKEDDILEESELMDFEMISDTPTNLMDGNIYVNDKTENNIQTLEK
LAFSNAMALSVRLSMWETAVDTFSNSMKQIPEHMKEGHKVNMSRQEVLRK
IGELLTLRHQINLYSDLLATPDFFWDRDELEKLYAKTCTYLEVGKRTKVM
NEKLNLCTELVEMLRSHLNEQHSHRLEWMIIWLITIEVVFEVAHWIDRVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012901XLOC_012901Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022948TCONS_00022948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003734DUF155
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003734Domain of unknown function DUF155PFAMPF02582DUF155coord: 22..201
e-value: 2.1E-46
score: 158.1

Blast
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BLAST of TCONS_00022948-protein vs. Swiss-Prot (Human)
Match: RMND1 (Required for meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=RMND1 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 4.350e-68
Identity = 108/242 (44.63%), Postives = 162/242 (66.94%), Query Frame = 0 
Query:    2 DAIDVLYIKKKKDEEDCQSEIFLFRRLGTFVGWNVQENEIHKLRQVFQEFELSPYKEDDILEESELMDFEMISDTPTNLMDGNIYVNDKTENNIQTLEKLAFSNAMALSVRLSMWETAVDTFSNSMKQIPEHMKEGHKVNMSRQEVLRKIGELLTLRHQINLYSDLLATPDFFWDRDELEKLYAKTCTYLEVGKRTKVMNEKLNLCTELVEMLRSHLNEQHSHRLEWMIIWLITIEVVFEVA 243
            DA ++L +  +   ++       F R G  V WNV++  +  + +V ++ E+ PY+   +  E+E +++  I +  + L  G I +N + + +   LEK AFSNA+ LSV+L++WE ++D F  S++ IPE +K G KV +S +EV++KIGEL  LRH+INL SD L TPDF+WDR+ LE LY KTC +L +G+R KVMNEKL  C EL +++R+HLNE+ + RLEWMI+ LITIEV+FE+ 
Sbjct:  205 DAANILVMGVENSAKEGDPGTIFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKI-EGQSKLHRGEIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEASLDKFIESIQSIPEALKAGKKVKLSHEEVMQKIGELFALRHRINLSSDFLITPDFYWDRENLEGLYDKTCQFLSIGRRVKVMNEKLQHCMELTDLMRNHLNEKRALRLEWMIVILITIEVMFELG 445
The following BLAST results are available for this feature:
BLAST of TCONS_00022948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RMND14.350e-6844.63Required for meiotic nuclear division protein 1 ho... [more]
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