TCONS_00020924-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020924-protein
Unique NameTCONS_00020924-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length391

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020924-protein ID=TCONS_00020924-protein|Name=TCONS_00020924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
MIDMSTTIKRENSLSPVPIVKSEVAAQQKKSTFFSIDQILGRREAQICDG
ETTTVNESDDVFDKDLSDAESFEDDKMNYNVNIDDDEELTDSEDIVVGDV
NNNTEIDNNSNAEEEKDVKDGETKDNKNDKTTPSYTAIIAQAILSSTDKK
LPLGCIYDYIAENFPEFLKKGQGWRNCVRHNLSLSECFIKAGRARNGRGN
YWGIHPRYVKNFSKGDFRKRRASHRPRNRDLSLMGYGISRYYPYYYNPFT
ASQGYSKAAPSLISPNSRSGFSVDNILSKGHRARVEQSGPPPISPYKPSW
SPRSAPHSRPSTAEGSRKIRLCSPPTLSSVIPTSHAYLEHYNYPHHQPHS
HHRTSPYEYGRPSSRTTECSCRSYGCPSNTTHGSSRTVSKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011738XLOC_011738Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020924TCONS_00020924Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 130..143
score: 44.56
coord: 174..191
score: 58.29
coord: 151..168
score: 38.32
IPR001766Fork head domainSMARTSM00339forkneu4coord: 128..216
e-value: 2.4E-29
score: 113.5
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 132..212
e-value: 7.9E-25
score: 86.9
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 130..222
score: 25.32
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 112..215
e-value: 3.2E-28
score: 97.3
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 131..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..319

Blast
[Close]
BLAST of TCONS_00020924-protein vs. Swiss-Prot (Human)
Match: FOXI1 (Forkhead box protein I1 OS=Homo sapiens GN=FOXI1 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 3.147e-22
Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = 0 
Query:  134 SYTAIIAQAILSSTDKKLPLGCIYDYIAENFPEFLKKGQGWRNCVRHNLSLSECFIKAGRARN--GRGNYWGIHPRYVKNFSKGDFRKRR 221
            SY+A+IA AI  + DK+L L  IY Y+A+NFP + K   GW+N +RHNLSL++CF K  R  +  G+GNYW + P   K F  G+FR++R
Sbjct:  127 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKR 216
The following BLAST results are available for this feature:
BLAST of TCONS_00020924-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXI13.147e-2248.89Forkhead box protein I1 OS=Homo sapiens GN=FOXI1 P... [more]
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