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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020121-protein ID=TCONS_00020121-protein|Name=TCONS_00020121-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1818bp
GGSQIIDTHSSCRHGVTIPLGGDIVFDGSVMKNHPKTAITIASWVNLNHV
EGVHSIFDTVGSHSNHNLGLYHFEVVGGDVRWFHRNETGGEVFSAITGEK
VIKPHVWNHLAVTYDSNTGDAIIYINGTENSRAKGHGLLSSDWNNRVGIG
RHKGSRFLDGMIDEFKLYDEALQKDSIEELAKKCDFSKYYCGSTLTEKNG
SISSPDYPKQFTGPVDCMWNIHGQPGEVIVLDMSQFHLGNKDTCGKANFE
VRDGLNDSVIGNYCGSNTVPKIVRSHSNRMYIQYTTDGALPGEMFKVDYH
REAKRTTKKTLFDDCRSTRTLNNVTLVGGMRAGKFTQLGTTDDMDLCKQR
CCHSGACDAAFLIDENCYAVKCTNKDLCRVRKAKSSGLNPKIAFLSADPD
EDLEEPVVEESESSTVPPASPATGESKEKTDASPSSTKAVDSTTEGAANK
CSHQPILNNVTLTGGIRSGKFKSHGHVDNMKDCIQYCCDQDECDLAFMVK
NTCFSLKCLDDKLCRSKAAKPSPYHPMVAYMTRYKPQKIATETGSTKGEI
SSSNEESTCKDMRVSKIYNDVTLNGGINSGDFTDKGHVSSIDECVSKCCD
TDTCNVAFVIKNTCFLVKCKSYDNCGLKSARSEYYSPKIAYINWNPPKDL
DDAVPYTYKGCWRDFDITAFAMPLMEGTDPKLSEPYKKRSDPVSTCSRVA
QDRGYRVFAVQNGGACFSGPDGEQTYKRYGKSDGCKSGKGGPFANNVYKT
FDDGSVIGLGCWADLKDRAFRRMEKNDPLLRDSVAQRSDPIGACAQVAQK
LNVPYFALQKGGQCFVGKSGEIDYQRYLPSRKCKYGLGGQMANDVYMLKK
NKTLAALPTSSDKDNRTATAEGKEASGTKLVEELSKPMSSDDEKTASKNA
TTDTSNSDKLVAFKPGLDKQHQEVSDDSDVENEEHVYKETIADNGDVQKL
VYKAAPTLVNVTLRSAINAGKFDDRGKVNSMDDCIKMCGQAGDCDVAFML
SSQCFTVHCFSEESCQNKPAFSDFYNPQLAYVKHRVINRHKNTTFGRTSF
PDKPCPVKTELSNVTFIEGINSGNFTDMGHVATFDQCKQKCCENTGCNIA
FKIQEDCYGVACHSRESCRTRPAKNANIFSPEMALMRSVHETLEQKPSIA
SSTTVAATKTDLPSPSNDTTSSEPISKLTTTESKLNTGQQSNFEMNAVKK
QESPRFKPKTQDHEEAVLTNTSNMTNTESKNICEWDGKEIQNRTLVGGIN
SGDFREHTQATTMKECMGQCCKEEDCDLSFMIDKDCYTVKCSRSDLCQTR
KAKATSFIPRIAYKKKSNVVENLNEKENEKMEISNNSTSLSSSNTTKGDA
KSSEASLATPVLAEPKKHSCNAGKIIYNATLRLGMHSGMFTKLGRVNSMD
DCIERCCKSSNADVAYKLGSFCFAVKCKTREMCKPSPTMFSDITSLNLNP
AISFLNQDKMPLSVVDETDKDILGSMYSTALDTDDLINIVIRNLTHQVRP
TASAKRHKSHPHSQSSVTSNSIQHNTITSNSIQHDIISSEQQVDDDIITE
GYWDAGSNEGTCSDSPITYNVTLRGGIHAGKFTQLGRGIDMRSCVGRCCN
TPLCDVAFMFSDKCYAVGCFNEADCQAVVAKPSALSPKLAYISKNRGSSQ
PAITDGIEFKVQSEGVCSINKVKHGPVYKNKTLIGGMKAGNFSYLGKAND
ITQCLSKCCSSGGCDLAYLVNRDQCFSVNCFTPELCQVTDKLFHNRDIEI
AKLIKPKHRHQISRGLLAAYFAIGLLGAVVGVAGFLWAALIFVKRNEVKK
KNIAARTRKEDDEQKPER Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1316..1336 |
| None | No IPR available | PFAM | PF13385 | Laminin_G_3 | coord: 33..177
e-value: 6.6E-23
score: 81.4 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 13..184
e-value: 1.4E-21
score: 77.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 857..932 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1324..1351 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 395..448 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1145..1182 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1500..1522 |
| IPR000859 | CUB domain | SMART | SM00042 | CUB_2 | coord: 191..302
e-value: 6.4E-26
score: 102.1 |
| IPR000859 | CUB domain | GENE3D | 2.60.120.290 | | coord: 191..307
e-value: 5.9E-25
score: 87.2 |
| IPR000859 | CUB domain | PFAM | PF00431 | CUB | coord: 191..299
e-value: 2.4E-22
score: 79.3 |
| IPR000859 | CUB domain | PROSITE | PS01180 | CUB | coord: 191..302
score: 24.438 |
| IPR000859 | CUB domain | CDD | cd00041 | CUB | coord: 191..299
e-value: 1.33175E-23
score: 97.8682 |
| IPR000859 | CUB domain | SUPERFAMILY | 49854 | Spermadhesin, CUB domain | coord: 191..299 |
| IPR011106 | Seven cysteines, N-terminal | SMART | SM00765 | manec2seq9d | coord: 554..637
e-value: 9.6E-4
score: 20.6
coord: 1557..1644
e-value: 0.1
score: 0.4 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 20..183 |
Blast
The following BLAST results are available for this feature:
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