TCONS_00019807-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019807-protein
Unique NameTCONS_00019807-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length675

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019807-protein ID=TCONS_00019807-protein|Name=TCONS_00019807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MERIKEKLNPEKMVQNRPENATTEDGQNYVSLTDRINQKIKDNEKFFSLE
FFPPRTPNGAVNLIARFDRMSRGGPLFCDVTWHPAGDPAGDKETSSTTIA
SIAANYCGIQTMLHMTCANLTKETVVKNLTKAKNLGLRNILALRGDPVNG
EEWKSFDDSLNYGSDLVKLIRQHFGSYFTICVAGYPNGHPDATSYEDDII
HLKEKVDAGADFIITQLFFKTEDHLKFVRDCRQAGITVPILPGVMPIQGY
ASLRQLVKLSKLEVPQEIMDVLEPMKNDDEAIRKYGVKQATEMCRELLQS
DDVPGLHFYTLNREVATIEILRNVGLWKKYQIHRPLPWKHSAHTKRIKED
VRPIFWAIRPKSYVHRTSSWDEFPNGRWGNSSAPSFAELTDHHLFFLRSP
KGKESRNKMWGNELESLQDVYHVFQCYLSGQKNKWGNKVTALPFNDEEIQ
TETSVLLEQLDRINGEGFLTINSQPNVNGVPSDNETFGWGGSGGYIYQKA
YLEFFMPKKYIKALRLVLKDLPQVNYHIIDNQGYVDDTNADRYQPIAVTW
GVFPGKEIKQPTVVDPISFNFWKDEAFGLWKIQWQSLYEEGSASANVIES
ICNDFVLVNLVDNDFIKGNCLFDIIEKTIEISPTLSPTVEEELANEKASF
QFESSDEEQRVTSPINEQTSPQLAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011139XLOC_011139Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019807TCONS_00019807Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004621Fadh2_euk
IPR029041FAD-linked_oxidoreductase-like
IPR003171Mehydrof_redctse
Vocabulary: Biological Process
TermDefinition
GO:0006555methionine metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004489methylenetetrahydrofolate reductase (NAD(P)H) activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006555 methionine metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004621Eukaryotic-type methylenetetrahydrofolate reductaseTIGRFAMTIGR00677TIGR00677coord: 46..329
e-value: 9.2E-114
score: 377.5
IPR029041FAD-linked oxidoreductase-likeGENE3D3.20.20.220coord: 26..335
e-value: 8.3E-108
score: 359.6
IPR029041FAD-linked oxidoreductase-likeSUPERFAMILY51730FAD-linked oxidoreductasecoord: 35..327
IPR003171Methylenetetrahydrofolate reductasePFAMPF02219MTHFRcoord: 35..325
e-value: 5.8E-113
score: 376.9
IPR003171Methylenetetrahydrofolate reductaseCDDcd00537MTHFRcoord: 47..324
e-value: 2.18385E-107
score: 328.036
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..675

Blast
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BLAST of TCONS_00019807-protein vs. Swiss-Prot (Human)
Match: MTHR (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 766.148 bits (1977), Expect = 0.000e+0
Identity = 364/608 (59.87%), Postives = 460/608 (75.66%), Query Frame = 0 
Query:   25 DGQNYVSLTDRINQKIKDNEKFFSLEFFPPRTPNGAVNLIARFDRMSRGGPLFCDVTWHPAGDPAGDKETSSTTIASIAANYCGIQTMLHMTCANLTKETVVKNLTKAKNLGLRNILALRGDPVNGEEWKSFDDSLNYGSDLVKLIRQHFGSYFTICVAGYPNGHPDATSYEDDIIHLKEKVDAGADFIITQLFFKTEDHLKFVRDCRQAGITVPILPGVMPIQGYASLRQLVKLSKLEVPQEIMDVLEPMKNDDEAIRKYGVKQATEMCRELLQSDDVPGLHFYTLNREVATIEILRNVGLWKKYQIHRPLPWKHSAHTKRIKEDVRPIFWAIRPKSYVHRTSSWDEFPNGRWGNSSAPSFAELTDHHLFFLRSPKGKESRNKMWGNELESLQDVYHVFQCYLSGQKNKWGNKVTALPFNDEEIQTETSVLLEQLDRINGEGFLTINSQPNVNGVPSDNETFGWGGSGGYIYQKAYLEFFMPKKYIKALRLVLKDLP-QVNYHIIDNQGYVDDTNADRYQPIAVTWGVFPGKEIKQPTVVDPISFNFWKDEAFGLWKIQWQSLYEEGSASANVIESICNDFVLVNLVDNDFIKGNCLFDIIEKTIEI 631
            D + +  L +++ ++++  +K+FSLEFFPPRT  GAVNLI+RFDRM+ GGPL+ DVTWHPAGDP  DKETSS  IAS A NYCG++T+LHMTC     E +  +L KAK LGL+NI+ALRGDP+ G++W+  +   NY  DLVK IR  FG YF ICVAGYP GHP+A S+E D+ HLKEKV AGADFIITQLFF+ +   +FV+ C   GIT PI+PG+ PIQGY SLRQLVKLSKLEVPQEI DV+EP+K++D AIR YG++ A  +C+ELL S  VPGLHFYTLNRE+AT E+L+ +G+W +    RPLPW  SAH KR +EDVRPIFWA RPKSY++RT  WDEFPNGRWGNSS+P+F EL D++LF+L+S   KE   KMWG EL S + V+ VF  YLSG+ N+ G+KVT LP+NDE +  ETS+L E+L R+N +G LTINSQPN+NG PS +   GWG SGGY++QKAYLEFF  ++  +AL  VLK    +VNYH+++ +G  + TNA   QP AVTWG+FPG+EI QPTVVDP+SF FWKDEAF LW  +W  LYEE S S  +I+ I +++ LVNLVDNDF   NCL+ ++E T+E+
Sbjct:   38 DPERHERLREKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPI-GDQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTE-DPRRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGE-NITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLEL 642
The following BLAST results are available for this feature:
BLAST of TCONS_00019807-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTHR0.000e+059.87Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
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