TCONS_00018711-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018711-protein
Unique Name	TCONS_00018711-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	510

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018711-protein ID=TCONS_00018711-protein|Name=TCONS_00018711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MVLTKEQSGLSCDNVNWIPETVHFYNNQDTITHDEKTGLLSYPKKDFLTV
PVHHTSSHKSYQSISPSDSFQESCHSDISTRSILLTYNGNTGTLGGGISL
VMTVASILPFLQGASVFSLPYAFVTAGKAFLPAFLTVNYLATLCSRLLMD
SIYVTSPDGTHRHRIYNSYADLAFACWGQFGAVIMKILNYLFFLLVNVVN
CVLFLRCLDNMLVGQDKVTPFQIQCVLLVLLIPIVLAIKDVSIFSYFGLF
STLSVLLACVMSMFVLIQRSDRWIENFELLPVIDWGKYRASLGITMLTMF
VAPTLPGFESVMAEPKRFPTAINIAFGVSGSFKAVFGVIGALSFGSVTQE
MLATNISESSLTLRFVVGSMLIINTLLNITFFMFTLLDSIDCFVYQHISA
RISSELKFSIPWKLTSRIVYLIIVLATSQLLPFFALASGVIGAVLISILG
FIAPVLFHLTLKWHVLSIQQRFGELMLLFLTIFVGATASHSSCYELVKEV
KKYHGLYKHT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010465	XLOC_010465	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018711	TCONS_00018711	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 97..494 e-value: 1.5E-25 score: 89.7

Blast

[Close]

BLAST of TCONS_00018711-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.072e-17
Identity = 95/375 (25.33%), Postives = 173/375 (46.13%), Query Frame = 0

Query:  111 LQGASVFSLPYAFVTAGKAFLPAFLTVNYLATLC---SRLLMDSIYVTSPDGTHRHRIYNSYADLAFACWG-QFGAVIMKILNYLFFLLVNVVNCVLFLRCLDNMLVGQDKVTPFQIQC---VLLVLLIPIVLAIKDVSIFSYFGLFSTLSVLLACVMSMFVLIQRSDRWI-ENFELLPVIDWGKYRASLGITMLTMFVAPTLPGFESVMAEPKRFPTAINIAFGVSGSFKAVFGVIGALSFGSVTQEMLATNISESSLTLRFVVGSMLIINTLLNITFFMFTLLDSIDCFVYQHIS-----ARISSELKFSIPWKLTSRIVYLIIVLATSQLLPFFALASGVIGAVLISILGFIAPVLFHLTLKWHVLSIQQRF 472
            +QG  V  LPYA +  G  +L  FL + + A +C    ++L+  +Y  + DG    R+ +SY  +A AC   +F  +  +++N    + + V+ C+L++    N++       P   +    +   +L+P    +K++   S F L  TL+  +  ++ +   + R+  W  E  +    ID  K+  S+GI + +      LP  E  M +P  F   +N     +   K +F ++  L++   T+E++  N+  S   +R VV   L+   LL+     F  ++ ++  ++Q  S     A  S + +    W LT R   ++  L  +  +P FAL  G+ G++  + L F+ P LFHL L W  L   Q F
Sbjct:  129 IQGMFVLGLPYAILHGG--YLGLFLII-FAAVVCCYTGKILIACLYEENEDG-EVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIEL-VMTCILYVVVSGNLMYNSFPGLPVSQKSWSIIATAVLLPCAF-LKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFY--IDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLPGS---IRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLK-SWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVF 491

The following BLAST results are available for this feature:

BLAST of TCONS_00018711-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018711-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VIAAT	3.072e-17	25.33	Vesicular inhibitory amino acid transporter OS=Hom...	[more]

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TCONS_00018711-protein (polypeptide) - C. hemisphaerica