TCONS_00017788-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017788-protein
Unique NameTCONS_00017788-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length353

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017788-protein ID=TCONS_00017788-protein|Name=TCONS_00017788-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
PEDQEIINRESKQGRKLKDKLLLQHVPDDAVEKEKDAGLQRALDHKNRLL
QYDRNFTKRTKVIDDESDYFASDNRWLSNKQRNLLKKKEQDLRDKRFASR
LDKKFTIDFAGRKIVESEENNHMYIEDDISTPIDSLKRNEQLTDTESDDR
HSLIDPRIGVQPPTFHPAERDETSEEARPKNVWKGSSTNNHKKRLQDNQL
QEISDQGMCMSMHQPWASLLVHGIKKLEGRSWYTPHRGRLWIASTAQRTD
QEDIKHVVDDYKRMYSDIPSHRYPKDYPSSALLGCVNVVDCASNEEYFQK
HPMCTEENGSAYLFVCENPEQLKIKFQISGKHKIYKLEPHIHVAAKKNLQ
FLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009971XLOC_009971Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017788TCONS_00017788Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007374ASCH_domain
IPR015947PUA-like_domain
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007374ASCH domainSMARTSM01022ASCH_2coord: 210..326
e-value: 0.0053
score: 26.0
IPR007374ASCH domainPFAMPF04266ASCHcoord: 210..304
e-value: 1.8E-15
score: 57.3
NoneNo IPR availableGENE3D2.30.130.30coord: 207..328
e-value: 1.4E-23
score: 82.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..195
NoneNo IPR availableCDDcd06554ASCH_ASC-1_likecoord: 207..322
e-value: 1.69351E-39
score: 136.307
IPR015947PUA-like domainSUPERFAMILY88697PUA domain-likecoord: 204..245
coord: 280..338

Blast
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BLAST of TCONS_00017788-protein vs. Swiss-Prot (Human)
Match: TRIP4 (Activating signal cointegrator 1 OS=Homo sapiens GN=TRIP4 PE=1 SV=4)

HSP 1 Score: 273.863 bits (699), Expect = 2.790e-87
Identity = 153/370 (41.35%), Postives = 230/370 (62.16%), Query Frame = 0 
Query:    2 EDQEIINRESKQGRKLKDKLLLQHVPDDAV-----------EKEKDAGLQRALDHKNRLLQYDRNFTKRTKVIDDESDYFASD-NRWLSNKQRNLLKKKEQDLRDKRFASRLDKKFTIDFAGRKIVESEENNHMYIE--DDISTPIDSLKRNEQLTDTESDDRHS------LIDPRIGVQPPTFHPAERDETSEEA-RPKNVWKGSSTNNHKKRLQDNQLQEISDQGMCMSMHQPWASLLVHGIKKLEGRSWYTPHRGRLWIASTAQRTDQEDIKHVVDDYKRMYS-DIPSHRYPKDYPSSALLGCVNVVDCASNEEYFQKHPMCTEENGSAYLFVCENPEQLKIKFQISGKHKIYKLEPHIHVAAKKNL 349
            E+Q+I+ R+S + +KL  KL+        V           E    +GL++A+ HK++LL++DR   +RT+VIDDESDYFASD N+WLS  +R  L+K+E++LR+ R ASRL KK TIDFAGRKI+E E +   Y    D+    I +   N+ LT     DR S      L++P +   PP +       + ++A R        ++  H+ R+QD + QE  D G C+S+HQPWASLLV GIK++EGRSWYTPHRGRLWIA+TA++   +++  +   Y+ +   D+    +P DYPS  LLGCV+++DC S +++ ++ P  ++E+ S ++F+C+NP+++ +KF I G  KI+KL+  IH  AKK L
Sbjct:  211 EEQDILQRDSNKSQKLLKKLMSGVENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSLAEYHSRLDETIQAIANGTLNQPLTKL---DRSSEEPLGVLVNPNMYQSPPQWVDHTGAASQKKAFRSSGFGLEFNSFQHQLRIQDQEFQEGFDGGWCLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATAKKPSPQEVSELQATYRLLRGKDV---EFPNDYPSGCLLGCVDLIDCLSQKQFKEQFPDISQESDSPFVFICKNPQEMVVKFPIKGNPKIWKLDSKIHQGAKKGL 574
The following BLAST results are available for this feature:
BLAST of TCONS_00017788-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRIP42.790e-8741.35Activating signal cointegrator 1 OS=Homo sapiens G... [more]
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