TCONS_00026774 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026774
Unique NameTCONS_00026774
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5454

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026774 ID=TCONS_00026774|Name=TCONS_00026774|organism=Clytia hemisphaerica|type=transcript|length=5454bp
CAGCATTCATCAATTATTTATCCAAGATCAGATGGAACAATCAGAATCAG
CATCAGCATTTCATAATGTAGACCTTGGTGACCCAGTATCAGATGAAGAA
ACCAATCCAATCATTAAGAAAGCGATGAATAATATTGCAATGTCCAGTGA
AGCGATTTCATTATACAAGTCTGCTGTCAAGGAACTAGAAGATGCGAAGA
TACTTGCTCTTAGAAAACCAATGACTAAACTTGAACAGGATTTTTTGACA
TTGGCCAGCTATGACATCTGCTCTGGTACTTTCTTTTCTTTGGCTGTTAA
GCTTGCCAGTGGGAAAACCTGTGTTTACTATTTTGAATCCGGAAATTTTC
ATGGTTTTATGGATGATGTGGGCTTGATAAAACTGCAAAAAATCTACGGG
GAGATCCACATACCGATATGCTGCTATTCAGCCCAAGATATAATATTGAA
GCGCAAAAGAAACATGAGTATGTTCCAAAACAAAAGATCAAAAGACATTG
ACGTAAACATCTCACTTGATACTTGACATGACATTACTGATAACAAACAA
GACATGACGAGAGTGGGAAACGTATTGCTTCAGCTTCCCGAAAGAACATC
AATCTGAACTTGAGTCCTCATTGACAGACTTTAGACCTTCCTTCAACCAT
AAACTGATATGGAATGACATTGAGACTCCAAGCATCAGTCAACAATTTGC
TGTCGTGAACTCTCTGCCCAACTTCCATTATTATTCTTGGGATGGGAAAC
CTGTCAAAGTGGTTCGGTATCAAGATCGCTTACCATCTGCATCCAAACCA
AAATCACCAAGAAATATAATTATCAAGGCGTTTGAAAATGCAGACTGCGC
TGGTTATGTCATTTCGTCAACAATATCACATATCACTGGTCACCCCACTG
ATTTACCGCATGTTATCTCTCAAAcaagcaagagaagaaagGTAGCCAAA
TCTTTCCTGGAGAATAATGAAAACTCACGAGAAGGATCCACTCGACAAgA
AGCACATCCAAGTCATGCTCATTTAGAGGATTCTTCAGTTGATTCCTCCG
ATCAAATGGAAAGCCAAACGTTTGAAGATGGATggaatgaaaatgaagat
aCTGAAATAGCACATACACCTaccaaagaagaaaattttCTCCAGCTCGA
ACAAGCATCACCCCGTGTAACTTCTCTCTTCAAATTTTATTGCTCGGAAT
TGATTAATCGTGGATCCATTTTCTGGAGAGTTCTTACAGATCGTCAGCAA
GTTGTTTGCATGAACGCTTTTCATGAAAAAACCGGAAACTTCTTGCCCAA
AGAATTTGTTCACGTCACCTTTACAAATTTCGACGACGGGTCACTGCACA
TGTCATGCACCTGTCAAACATCAACGCTGACAACAGGTTTTTCTGTTGGC
AAGAAGTCTACTTCAAAAGTCTGCCTCCATAAAAGacttatcaaaaatat
aaacaactccgaTGACAAAATCATTGACGATGCAATAGTGGCAGAAGGCA
AAACTCGAGTCGAAGATAAAGTTGTTATGCTGCGTAGTAAATCTGGCATC
GAAAAATACTCCGTTGTAGGTTCTGATGGTTCGGTGTCCTTCGTTCACGT
AACTGCTAATCTTGGTCGTCTGATGGTCAGTTGTCAATCAGGATCGTGTA
ACTTTGGCCAAGGTGGTAAAAGTCGGAAGCTTTCGTCTCTTTCATCTCCC
GAATGCGGATGTGTTCATTTAAAGGAATTCAGACGCTTTCGAGAGATTCC
TGCTGATGAACCAGACGATGAATTAAAAGACTTTACAGAATTTGTTATCC
CGACAGAAAAATTGGAAGAAGTATTCGATGTCGAAAGTGGTTTATGGACC
TTCCACAAAAATTCGCCGAGCAAAATAAATGTCAGCTCTGACAGCACGTG
TgaaacattgaaaaagaatttcaaagcaAGAATAATTCCTGAAACTGGCT
CCTTGTATCAGTCCAACTCAGAAAAGTGTTCGTGTGGGAATTATTGGCAA
AAGAAGAAGCGTACTTCCACGTTATACTCGATGATGAGTGCATGTGACAT
CGAGGTCATCGAAAAATACTGCGTTTGTGGTAAACGAGAAGAATGGGATG
GTGCTGAGCACTCTATATATCGGTCAACGCGTTCCACGTGTGCTGGGTAT
GAGCTAGGTTGGCAGTTCGTAAACACGGTACTTGATAGTGGAACattcag
tggtttcatttcaaaaatgaccTACAACTACGAGCTTTCATCCTCTCCAC
GTCCGTTCATGTCGCTTCAAACGTTCATCAAGTGGTTTTTTGGATGGGCT
TCTGCAATGAACATTGATTTTCGGATGGGTTGTAAAGGCTGCGGTGAGAA
TCCCAAGgtATTGGCATGTGACGGAACCAAAATTGGTACTAACTTTAAAA
ACGTGTTTGTCACTCCGATTGAGAAGCCAAGTTATGACCATCCCACGGAG
ACTCTTGGTGCTATGGATCGCTGCCCGTTGAAAAACCAATTAGCAAGAAC
AGCATTTGCAGAATTAGTTGATCAGGATACGACTGAGCACTTTGAGGCCA
TCCCTGACGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTT
GACCATCTTAAAAAGGCTTACTCCAATGTTTACAAACAACTGTCAAGAAC
ATCTTCCGTCGACACAATTATTNAGGCCATCCCTGACGAGTTAAAACCTT
TTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTTAC
TCCAATGTTTACAAACAACTGTCAAGAACGTCTTCCGTCGACACAATTAT
ACCTTTTGAGATTGTCGAGTTTTGTCTGCAAGCCTCAGAGTTTGCACTTC
TTGGGCTTTCATCGTTATCGAAAGTGCATGAGCTCATTTCGTTGTTTACT
TCATATAACATGGAGATTGCTACTTTAATCAGGAGCTCCTTGACCGTCCA
CAAGTCTCCCACAAGAGATATTTTTGACATGATACGTTACTGCTGCAACA
AATGTAAAGAAGTTCACGCACATGACGTAAAACCTGAAGGTGCAAATCCT
ATTTCTGGTACATACAACCCTCCACGCGATGGTAGGGCTTACTATTTTAG
CAACCATGGACAACAGATCCGGAAAATAAGATCTTTCCCAATTGATAAGC
GGAATCAGGCATCAAAACCATCAACTGAATGCAGTAAGAAATTTCCTGTT
GTCAGCAAAACTGGCACAAGCTATCTGTTTGCCTGGTTCTGCCCCTTACA
TGGCCATTGCTATGGTTACCACGTTATCCCCTTCTCTGAAGGCCGCAAAG
ACccattttcttctctttatATGTTTTGTGAACTTCCGCCAGATGTTGTT
TTGTATGACTTTGGATGTCAACTGGACGAGTACTGTCGCAATCGTGAATC
TGGCTTCTTTTGTTGCACTCGTTTTTTCCATGACATTTTTCACGGTTATA
ATCACGTTTGCGGTTCCACCTTTCGATGTGACCGTTTGAATGGATTCCAC
GTAATGAACACGNgagccataagggtaccttttctcattcctcaaaagta
cTGTCGCAATCGTGAATCTGGCTTCTTTTGTTGCACTCGTTTTTTCCATG
ACATTTTTCACGGTTATAATCACGTTTGCGGTTCCACTTTTCGATGTGAC
CGTTTGAATGGATTCCACGTAATGAACACGTCAATCTGTGAACAATTCAA
CTCCTTTTTACAATGCATCAAACGCTCCGCCAAACTCATGTCGCAAactc
attttaatttttatttgcaGTTTTTTATTCATGTTTGGAACATGAAAAAG
CAAACCTCGTTTGAAGCAAAAATTAACATCGCTGATTGTTGTGAAGAATA
AACACATTGATTATGAACATTCATTTCAACATTGAATTGAACCATCTCGT
ATGATGAATGTACTTACACGTTCTGTTTCTTAAGAACGcgaggcttcgct
ggccaaattattaagaacaagttaagaatattttgaacACAATTTTTGAA
GGCTATATAAACTTTacttaaactttatttttgctATAATAATTTAACtt
aatttatagaagtgtatttctcagatctattgacctctatgaaacaatct
tacagtacatctttacaatttatagattaTAGAGTTTTTACAGTTAGGGT
AGGCACACACTGGGCCTCTAACCCGCTCTTCTTATAATCATGTTGTTTCc
gtcgtaaatttctttaaatagagtttagtcctaggacttacctctcactt
tccatatatgactcttgtctttttattttgctgttctttcttttgcttta
tgATGCCATCGTTTTATTATCTCGCgttctttccttgaaaaatcgtctga
TACTCTGAAATCATCTTTATCTAGTTTGTGGGCTGTTGCAAGGATTCTAA
TCCTTTCATCTTCACTCTCGAGACTAACTTTTAATGGTCTCCATCGTTCA
TTTGAATACATTTCATCTTTACGAGCACCTATGCGTTCTACCTTGATTAT
CGTCACATCGAAACCCATTTGTTTTTTCAGCATTCTTTCTATAAAATCTT
TGTCATCAACTCGTTGCTCTTCTTCGTTTTCGTTCTTGTTTTCACCTATA
TCATGCATCATGATATTGCACTTGGTTGATTTGAGCCAACGCTCCTCTTC
GTTCACTgatttgatgaaactttttaTGGTCGCCTCTTCTTTTTGTAGAT
CTTCTTTGGTGACTTCTGcatatgattgtttttttgtttctgtgtTGTTG
AGCTGTGTTTCAGATCGTTTGTTGTTCCGTTCTTTGTTGACgtctttttt
attcattagcCTCTCGAATTTTCTTTCTAGAGAGGTTATTCTCTCGTGGA
AACCTAATTTCAATCCATGATGTTCATCTTTATCTGCTTTTTTCGTTGTG
ATGTTACTGCGAACTTTTTGTCTGCTTGTTTTAATCCCCTCAAGTAAGAG
TGGCGTTATTGTAACACAATTTCCACATTTGAAGCGCCGGCTTTTATATT
GCAGACAAAGCTGAATCTGATAGGCCGATAGCTCAGAGCAAGCATAATGG
ACAAGTCTATCACATCTCCTACATTGTAAGGTGTCGTTATCTGCTATGAT
GGTCTTTGTTAAACTGTTATTGGGTGTGCAATATCCataattttattgaa
tttccttgttagaattttcgTTTATTTCCGCCAAATTATTGCATTTGCAG
GATCGTGGCTGCACAATTTGACACCGTATGAAAACTCTTTTAAGGAGAAA
GATtcatcaaaaaacattttcattcgtTACATTTTAAACTTCGTTGATTT
CTAATACGTTATTATATTTTTCGTTTTGAAACTTACTTGTAACCTTTGAG
AACAGCTATTGGAAGCATTACTTGAACTTacttaaatttattttgtaaaC
AATAGTATTTTTCTAATTGcttagaaaatgaaataaaaccaTATCGGATT
CGAG
Run BLAST on NCBI

transcript from alignment at sc0000587:168917..180039+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026774 ID=TCONS_00026774|Name=TCONS_00026774|organism=Clytia hemisphaerica|type=transcript|length=11123bp|location=Sequence derived from alignment at sc0000587:168917..180039+ (Clytia hemisphaerica)
CAGCATTCATCAATTATTTATCCAAGATCAGGTATGATTCAGTTTCCCAC
TCACTCTGTCAGTCATTGATAACATAACAAAATGATGGCAAAAATCCTTT
TCAGTCCTTTTCTAGGTGGACCCTGCCCTTCCTTCCATCTTGGGGAATGT
TAGTCATATTAAGAACCAGCTAAAAAGTTTGTTAAAGATTAAGGGATGCT
CTTTGCTTACAAGCGAAGTAAATTATATAAAGTGCTGGAGTTTTTGGCTG
AATGTCAAATGAAATGTGCCCGTCTATTGAGTGACTACTAGCTAGCAGCA
CAAATACTAATCTCTACAATCTATGTAAATCATTTTTTCTCTATGCAATA
GCTGTGTTGAAAGAGAAAAATCAATTACATGGAATAtatcatttataaaa
aaatttatgttgATAATAATTAGCTCATTCTCATTCAATAGACCGTTGTA
ATTGCCTTACAAGCTACATAAAAAACTATTATTTACTTGAGACTTGACTT
TTAAAGCAAAGAATCTAGCACGATATCTAAAGGGATTAATGAAAACTAAA
TGGTACTTTTTAATacagtaatttttttattataaagcaCTCTGGGCAAT
CTTATTGTATATatatgggctcttccagaaaaatttgtcgacatctgtct
tctaatttcgacacccttctttagagataggaacaatagaaactgaggaa
ggtcagaattgctgattgactttgattagcgcgatgagaggaaaaatctt
tagactatcagtgatttcgaccttcttattattcctatctataaagaagg
atgtcgaaataaGAAGacagatgtcgacattagaccaacttacggtaggg
GGTGGACGCCaggaattttcagataaaaaaagcactcggaaatccagtca
atttttcaaaatgcttCGGAAATTtcactcaattttttatttgaacccTT
GCAAATTTCACATACTgtaatttgtcaaaattttgaaaaaagtatctgaa
attccagatttttctgccaaaaatttgattttgtattggaaatccagGAG
TTTTAATAGATGTATTGGCGAATGCGCCAGTCTTttaaataactaattac
tctacatacattactttccctcagccaataaaaacatgataaattatctt
gtctctaggtaactgttgtggagtaattagttattcaaaagaggGTAGCC
TAAGCCAAAAGCTATtgcttttgtattggaaatccaggaatttcaaaaaa
acattttgcctcAGAATTTTGctgtcgtccacccccctgtaatGGACTTT
AACTGGAATTGAGCCCAAGAACAAATTTTAGCTGTTGGTTGTTTGCATGA
CATTGTTCTCCCAAGAAATGAAATTCCAGAAGGGggctataatttttttt
gcaattttgcaagAAGTTTGatttgagttgttttttttcaagggGTTGGA
TGTTCAAGCATTGTCCACCATATGAAATGATAAACAACAGAAAGTGGCAG
TATCCTATTCATTCAAAAAACGGTTTGTGGTGCCAAAGATATTTATTGAA
TGAGAAATGCATGCAGCAAAGAGGGTGAAATATTGACAACAAGTATTGAG
AAAGCGAAATCTTTACTTCAGAAGAAATAACATCCACCTTTTTTTTCCGT
ATCTTTACTTCAGAAGTATCATTATATATCTTCGTTTTACGTACCAATCA
TTTTAAATCCTATCCCGAGCAAGGAGATAACGATGAGTGAGACAAGAAGA
ATAAAGTAACAGATCAGAAAGGACACTGAGATGAgatgcttttaaaattg
cattgGTGAGATTTATAAGCACCTTTAAAAGCTTAAATAAACTTAACCAT
CACTTAAGGCAACTTTTCAGAAATCGATAGAAAGTGGAGCACCAAATTAT
TCGTTCCCGCTGTCAAGCATGTTatgttggaaaaaatctactGTAATCAA
TTACATTTTTAAGAACACAAGAGATGAAACATTCCAGTGGAAATGCACTT
ACAATTGATGACGtacaaatttttgcaaaatcgaACAAATCAGAGTAACA
TTTATGGCCCTAGAGGCACTTTATATAAAAGTCATTGAACTTTCAATTAA
CATTTAAGACGTGTCATTAGTCATtaatgttattgtttttatagcatttt
tactgtttttaactTATCATTTTGTATCATTTATACCTGATGACTATGTT
AAGACATCAAAATATATTattgtcaaaattaaattttgatcaaagcacca
aaatttcttcaaaagttcacaatattttttaccaaagaGATTAAAATGAT
ATAAATAAGCTTGTTTAATTCCAAGtgtttgaagaaatttttgttatttt
gaaatattcaaggGGGTAAGATAGACATTTTGACAACCACTgcttatttt
ctttaatttagaattttcgttATCTTTCTAGCAAACATAAAAGAGTCTGC
TGGAGTAGTAAATTTTgcttttttaccaattttattttGCTTCTGAATTG
GaagttttcttcttcactttctttGAAGTGTTGGTGTAGGTATTTGAGAT
TGAGTTGAAAATCATATGTCTATGTGTCTGAAAGAAATTTACCATGTTGT
CTCCTccaaaattcttttcatttctAAATTGACTtaattataaaaaacac
aaCTAAAACTTTCCATATTTGGGTCgaacttattttttattttgaaagct
aATTAAAGGGAGTCTGCATATCAATGATTTTTCCAATGACCTTTTCAAGT
TtcattatattgaataaatattctCTTTTAAAAGATGGAACAATCAGAAT
CAGCATCAGCATTTCATAATGTAGACCTTGGTGACCCAGTATCAGATGAA
GAAACCAGTATGTCTTTTTTTTAGCCTTACTTCTCCATGAGCTTTAGTTA
TTATTGAAGCAATACATAGTAGATTCGtttttgaatttccaaaaaaagat
tAGCTGAATATAAAGGCGAAAACAAAACATACATTTGAAGACCTTTGTCA
TTTTAGATCCAATCATTAAGAAAGCGATGAATAATATTGCAATGTCCAGT
GAAGCGATTTCATTATACAAGTCTGCTGTCAAGGTAAAGATATAATGTCT
TAAtcttttttagttatttttaatCAGATATTTTGGCCATATGTGAGCAT
TTTAAGCGTTATATCTAAAATCATTGCTATTTAAATGGCTATCTTTAACG
GTTACTTTAAgtctaaatattttttacacAATATTATAGGAACTAGAAGA
TGCGAAGATACTTGCTCTTAGAAAACCAATGACTAAACTTGAACAGGATT
TTTTGACATTGGCCAGCTATGACATCTGCTCTGGTACTTTCTTTTCTTTG
GCTGTTAAGCTTGCCAGTGGGAAAACCTGTGTTTACTATTTTGAATCCGG
AAATTTTCATGGTTTTATGGATGATGTGGGCTTGATAAAACTGCAAAAAA
TCTACGGGGAGATCCACATACCGATATGCTGCTATTCAGCCCAAGATATA
ATATTGAAGCGCAAAAGAAACATGAGTATGTTCCAAAACAAAAGATCAAA
AGGTATAGTTTAAGCCTCGTATGTTATCTGAGTAGATAGCTGAGTATTTT
AGTCCTTAATCCTGCTTAATCTTGTTGTTTTTCAAATTAAGCCTATTGGT
TATTGCTTCTCCAATCTGAATTATCAAATACTATCAACTAGAATTTCTTA
GTTTATCAAGTCCTGAATCATTAGCCCGCGGTTGATAGTTGATATTAAAG
CTATTCTTTTTACTTTACCCATTTAGACATTGACGTAAACATCTCACTTG
ATACTTGACATGACATTACTGATAACAAACAAGACATGACGAGAGTGGGA
AACGTATGTACAACCTATGACGCTTCTTAATTACACTGATAAACTCCAAC
TTCGTTTTGAACTTGTTTTTCCTTTACGATTATCTTAAGATCATCCCAGG
TATGATGCGTTCAAAAGAAAAGTCTACGATGATAAAGATTCAATTGACCA
ATGTCTGAAAGTTTTGGCTGACAGCCTTTGGCAACAAGATGGCATCAAGA
TGCTTGGAGTCTTTGCTCTTTGTCTGAGAAAAGAACAGAAATGGAGAGAC
GTTCGTGATGAAAAAGATCGAAGTTCACAAAGGTTTCTTTACGATGAGGA
TTATTatgttgaaaacaaaacacttttagaattctttttcaTTAATGTTT
ACCTGATGAGTGTGAAAGATATTATTGTTAACTTCCCCCTCATATTTCAT
ATTTGATTAATTGTACTATAAGCCTTTGTTTGCAAGTGCGATATTCTCTA
TTTCATTGATAATCATTGATAATCATTCACAGGGATACAAGATTATAAGC
TCCATTAAGCTAATCACGCGATTCATAATAATCGTTGCACCTACGCTTTG
TTTAGGTATTGTNGCTAATCACACGATTCATAATATTCGTTGCACCTACG
CTTTGTTTAGGTATTGCTTCAGCTTCCCGAAAGAACATCAATCTGAACTT
GAGTCCTCATTGACAGACTTTAGACCTTCCTTCAACCATAAACTGATATG
GAATGACATTGAGACTCCAAGCATCAGTCAACAATTTGCTGTCGTGAACT
CTCTGCCCAACTTCCATTATTATTCTTGGGATGGGAAACCTGTCAAAGTG
GTTCGGTATCAAGATCGCTTACCATCTGCATCCAAACCAAAATCACCAAG
AAATATAATTATCAAGGCGTTTGAAAATGCAGACTGCGCTGGTTATGTCA
TTTCGTCAACAATATCACATATCACTGGTCACCCCACTGATTTACCGCAT
GTTATCTCTCAAAcaagcaagagaagaaaggtTTTTAATTTAGAATTAGC
TTTTTACTGATTTCTCATATTGATTTTTGCTGTAGTTATGTAACAACTGA
TTTAAAAGAATGATCCCATTTTAATAATAATTGCACATTTTGGAGTACAC
TTGGCGATGAATCAAGATTAATGAggagaaaatttgaatttcttcaagTT
CGTTAATTTGTGTGCGAGTTTATTGATATCTCTAACCATCAATTTCATTT
AGGTAGCCAAATCTTTCCTGGAGAATAATGAAAACTCACGAGAAGGATCC
ACTCGACAAGTaatgattttaattttcctAAATCAGACTCTGGCTGTAAA
ATGCTTCTGTTTCGAAGCTAACTATGTGCTAGAAAAAGTCGATCATTTAC
AAGATTGATAAAGCacttttttcattaattttttaggAAGCACATCCAAG
TCATGCTCATTTAGAGGATTCTTCAGTTGATTCCTCCGATCAAATGGAAG
TACGtcattttaattcttttgatgTTTTGGGGAGTTGCGTTGGGGAGTGT
TGAGTTTGTCGGTTCACTTAAGTTTAACGCTAtgttttaattgaaaatca
tTTGTTACTCTCAGAGCCAAACGTTTGAAGATGGATggaatgaaaatgaa
gataCTGAAATAGCACATACACCTaccaaagaagaaaattttgtaTGATC
TTTTGTTTTACCGAAGTTATGAGTAATAATGTCCTTTTTAGCATTACTTa
gttcaaattttttaattctgttcGTTAAGGAAAATGTAATCTCTTCATCG
TAATCTTTTGATTGTCTTACTTTGTTTTTAGCTCCAGCTCGAACAAGCAT
CACCCCGTGTAACTTCTCTCTTCAAATTTTATTGCTCGGAATTGATTAAT
CGTGGATCCATTTTCTGGAGAGTTCTTACAGATCGTCAGCAAGTTGTTTG
CATGAACGCTTTTCATGAAAAAACCGGAAACTTCTTGGTAAAAATGTCTT
CTTTTGAATTTCTGTCGCTTTTTGTGATATTTATTCATGAAAAGTTAGAT
TTGTGGAATCTGCACTTATTAGTTATATCTATTTTTCGATGCTAGATTTA
CTACGCAGCAACCTGGTAAACCTGGAATACAAGCCTTTTGAACCGACTTG
TTGACAAAACCTTTCGCAAGTAAAAAGTGCATCGTCCTTTTAGCCATAAC
CCCAAAGAAGATTTTTCCGTCCACATCGAGTAGAGATATAAGTCGAATCT
GGTCAAGTGTGAATCTTGTTCTTCCGGTATGTAAACACCTTCTGCCGTTG
TCCATCGTTTGGGGAGGACTTTTTCTTTCCAAGTCCTGTGCAAAAGAAGG
AAGAGTTTGTTTAAGAAGGCTTTGTAGTTATTTGTATATAATCACTTTGT
CTCTTTCTAGCCCAAAGAATTTGTTCACGTCACCTTTACAAATTTCGACG
ACGGGTCACTGCACATGTCATGCACCTGTCAAACATCAACGCTGACAACA
GGTTTTTCTGTTGGCAAGAAGTCTACTTCAAAAGTCTGCCTCCATAAAAG
acttatcaaaaatataaacaactccgaTGACAAAATCATTGACGATGCAA
TAGTGGCAGAAGGCAAAACTCGAGTCGAAGATAAAGTTGTTATGCTGCGT
AGTAAATCTGGCATCGAAAAATACTCCGTTGTAGGTTCTGATGGTTCGGT
GTCCTTCGTTCACGTAACTGCTAATCTTGGTCGTCTGATGGTCAGTTGTC
AATCAGGATCGTGTAACTTTGGCCAAGGTGGTAAAAGTCGGAAGCTTTCG
TCTCTTTCATCTCCCGAATGCGGATGTGTTCATTTAAAGGAATTCAGACG
CTTTCGAGAGATTCCTGCTGATGAACCAGACGATGAATTAAAAGACTTTA
CAGAATTTGTTATCCCGACAGAAAAAGTGAGTAGttcaatacacaggttg
caaaaaataaattttgaagtcAAATCACACTTTTACTCGAAACTTTAATG
AACTTTACGACATGacctttatttctgattggttcgaatttattgagact
aataaagttatcagggGCTATCAGGACGTGGcaaattaattttgtttttc
aacaaCCTGAAAAGAGTTGGACGTTTTCATTGGGCTAACGGGCTACTAAG
GTTCNcaaattgattttgtttttcagtAACCTGAAAAGAGTTGAACGTTT
TCATTGGGATAATGGGCTACTAAGGTTGATTgtttttcatattatttttt
caataaatttcttgTTTCTTATCATAAAGTTGGAAGAAGTATTCGATGTC
GAAAGTGGTTTATGGACCTTCCACAAAAATTCGCCGAGCAAAATAAATGT
CAGCTCTGACAGCACGTGTgaaacattgaaaaagaatttcaaagcaAGAA
TAATTCCTGAAACTGGCTCCTTGTATCAGTCCAACTCAGAAAAGTGTTCG
TGTGGGGTAGGTAATAGTTTTTAAGCGTATATGCTTTTTGTATGATTGCC
ATTTAGCGTGTAGAAACACTTAGATCGCTGAATTTCCTGGTTCTCGTTAT
GAAATCAATTTCAAATCATTACTCATAGAATTATTGGCAAAAGAAGAAGC
GTACTTCCACGTTATACTCGATGATGAGTGCATGTGACATCGAGGTCATC
GAAAAATACTGCGTTTGTGGTAAACGAGAAGAATGGGATGGTGCTGAGCA
CTCTATATATCGGTCAACGCGTTCCACGTGTGCTGGGTATGAGCTAGGTA
TGAACTTGTTGGTTAAAGGCGTCATTAAACGGTCTCGTACTAATGTGCTT
AATTGTGATGTATTAAACACGATTTTATAGaagatatatctttcattaTC
GGTTTTATGGTTCCCTAAATGTTTACTCCCTTTTATTTAGGTTGGCAGTT
CGTAAACACGGTACTTGATAGTGGAACattcagtggtttcatttcaaaaa
tgaccTACAACTACGAGCTTTCATCCTCTCCACGTCCGTTCATGTCGCTT
CAAACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGA
TTTTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTAAAGATCC
AAAACTAtctgttttttgttgtttagacACGCTGCACAAATAATATAACC
AAAAGTGTTGCCTTCAATATTGATGTGGAAATTTACTGTAACCTAACTTC
TGATTCacaatttctttatttcttaggtATTGGCATGTGACGGAACCAAA
ATTGGTACTAACTTTAAAAACGTGTTTGTCACTCCGATTGAGAAGCCAAG
TTATGACCATCCCACGGAGACTCTTGGTGCTATGGATCGCTGCCCGTTGA
AAAACCAATTAGCAAGAACAGCATTTGCAGAATTAGTTGATCAGGATACG
ACTGAGCACTTTGAGGCCATCCCTGACGAGTTAAAACCTTTTGCTTCTCA
AAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTTACTCCAATGTTT
ACAAACAACTGTCAAGAACATCTTCCGTCGACACAATTATTNAGGCCATC
CCTGACGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGA
CCATCTTAAAAAGGCTTACTCCAATGTTTACAAACAACTGTCAAGAACGT
CTTCCGTCGACACAATTATACCTTTTGAGATTGTCGAGTTTTGTCTGCAA
GCCTCAGAGTTTGCACTTCTTGGGCTTTCATCGTTATCGAAAGTGCATGA
GCTCATTTCGTTGTTTACTTCATATAACATGGAGATTGCTACTTTAATCA
GGAGCTCCTTGACCGTCCACAAGTCTCCCACAAGAGATATTTTTGACATG
ATACGTTACTGCTGCAACAAATGTAAAGAAGTTCACGCACATGACGTAAA
ACCTGAAGGTGCAAATCCTATTTCTGGTACATACAACCCTCCACGCGATG
GTAGGGCTTACTATTTTAGCAACCATGGACAACAGATCCGGAAAATAAGA
TCTTTCCCAATTGATAAGCGGAATCAGGCATCAAAACCATCAACTGAATG
CAGTAAGAAATTTCCTGTTGTCAGCAAAACTGGCACAAGCTATCTGTTTG
CCTGGTTCTGCCCCTTACATGGCCATTGCTATGGTTACCACGTTATCCCC
TTCTCTGAAGGCCGCAAAGACccattttcttctctttatATGTTTTGTGA
ACTTCCGCCAGATGTTGTTTTGTATGACTTTGGATGTCAACTGGACGAGT
ACTGTCGCAATCGTGAATCTGGCTTCTTTTGTTGCACTCGTTTTTTCCAT
GACATTTTTCACGGTTATAATCACGTTTGCGGTTCCACCTTTCGATGTGA
CCGTTTGAATGGATTCCACGTAATGAACACGNgagccataagggtacctt
ttctcattcctcaaaagtacTGTCGCAATCGTGAATCTGGCTTCTTTTGT
TGCACTCGTTTTTTCCATGACATTTTTCACGGTTATAATCACGTTTGCGG
TTCCACTTTTCGATGTGACCGTTTGAATGGATTCCACGTAATGAACACGT
CAATCTGTGAACAATTCAACTCCTTTTTACAATGCATCAAACGCTCCGCC
AAACTCATGTCGCAAactcattttaatttttatttgcaGTTTTTTATTCA
TGTTTGGAACATGAAAAAGCAAACCTCGTTTGAAGCAAAAATTAACATCG
CTGATTGTTGTGAAGAATAAACACATTGATTATGAACATTCATTTCAACA
TTGAATTGAACCATCTCGTATGATGAATGTACTTACACGTTCTGTTTCTT
AAGAACGcgaggcttcgctggccaaattattaagaacaagttaagaatat
tttgaacACAATTTTTGAAGGCTATATAAACTTTacttaaactttatttt
tgctATAATAATTTAACttaatttatagaagtgtatttctcagatctatt
gacctctatgaaacaatcttacagtacatctttacaatttatagattaTA
GAGTTTTTACAGTTAGGGTAGGCACACACTGGGCCTCTAACCCGCTCTTC
TTATAATCATGTTGTTTCcgtcgtaaatttctttaaatagagtttagtcc
taggacttacctctcactttccatatatgactcttgtctttttattttgc
tgttctttcttttgctttatgATGCCATCGTTTTATTATCTCGCgttctt
tccttgaaaaatcgtctgaTACTCTGAAATCATCTTTATCTAGTTTGTGG
GCTGTTGCAAGGATTCTAATCCTTTCATCTTCACTCTCGAGACTAACTTT
TAATGGTCTCCATCGTTCATTTGAATACATTTCATCTTTACGAGCACCTA
TGCGTTCTACCTTGATTATCGTCACATCGAAACCCATTTGTTTTTTCAGC
ATTCTTTCTATAAAATCTTTGTCATCAACTCGTTGCTCTTCTTCGTTTTC
GTTCTTGTTTTCACCTATATCATGCATCATGATATTGCACTTGGTTGATT
TGAGCCAACGCTCCTCTTCGTTCACTgatttgatgaaactttttaTGGTC
GCCTCTTCTTTTTGTAGATCTTCTTTGGTGACTTCTGcatatgattgttt
ttttgtttctgtgtTGTTGAGCTGTGTTTCAGATCGTTTGTTGTTCCGTT
CTTTGTTGACgtcttttttattcattagcCTCTCGAATTTTCTTTCTAGA
GAGGTTATTCTCTCGTGGAAACCTAATTTCAATCCATGATGTTCATCTTT
ATCTGCTTTTTTCGTTGTGATGTTACTGCGAACTTTTTGTCTGCTTGTTT
TAATCCCCTCAAGTAAGAGTGGCGTTATTGTAACACAATTTCCACATTTG
AAGCGCCGGCTTTTATATTGCAGACAAAGCTGAATCTGATAGGCCGATAG
CTCAGAGCAAGCATAATGGACAAGTCTATCACATCTCCTACATTGTAAGG
TGTCGTTATCTGCTATGATGGTCTTTGTTAAACTGTTATTGGGTGTGCAA
TATCCataattttattgaatttccttgttagaattttcgTTTATTTCCGC
CAAATTATTGCATTTGCAGGATCGTGGCTGCACAATTTGACACCGTATGA
AAACTCTTTTAAGGAGAAAGATtcatcaaaaaacattttcattcgtTACA
TTTTAAACTTCGTTGATTTCTAATACGTTATTATATTTTTCGTTTTGAAA
CTTACTTGTAACCTTTGAGAACAGCTATTGGAAGCATTACTTGAACTTac
ttaaatttattttgtaaaCAATAGTATTTTTCTAATTGcttagaaaatga
aataaaaccaTATCGGATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015042XLOC_015042Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026774-exon-sc0000587-1491911889:168917..168947TCONS_00026774-exon-sc0000587-1491911889:168917..168947Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:168917..168947TCONS_00026774-exon-sc0000587-1510915933:168917..168947Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:168917..168947TCONS_00026774-exon-sc0000587-1575043694:168917..168947Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:171701..171773TCONS_00026774-exon-sc0000587-1491911889:171701..171773Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:171701..171773TCONS_00026774-exon-sc0000587-1510915933:171701..171773Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:171701..171773TCONS_00026774-exon-sc0000587-1575043694:171701..171773Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:171923..171999TCONS_00026774-exon-sc0000587-1491911889:171923..171999Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:171923..171999TCONS_00026774-exon-sc0000587-1510915933:171923..171999Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:171923..171999TCONS_00026774-exon-sc0000587-1575043694:171923..171999Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:172156..172468TCONS_00026774-exon-sc0000587-1491911889:172156..172468Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:172156..172468TCONS_00026774-exon-sc0000587-1510915933:172156..172468Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:172156..172468TCONS_00026774-exon-sc0000587-1575043694:172156..172468Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:172693..172769TCONS_00026774-exon-sc0000587-1491911889:172693..172769Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:172693..172769TCONS_00026774-exon-sc0000587-1510915933:172693..172769Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:172693..172769TCONS_00026774-exon-sc0000587-1575043694:172693..172769Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:173377..173746TCONS_00026774-exon-sc0000587-1491911889:173377..173746Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:173377..173746TCONS_00026774-exon-sc0000587-1510915933:173377..173746Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:173377..173746TCONS_00026774-exon-sc0000587-1575043694:173377..173746Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:173969..174025TCONS_00026774-exon-sc0000587-1491911889:173969..174025Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:173969..174025TCONS_00026774-exon-sc0000587-1510915933:173969..174025Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:173969..174025TCONS_00026774-exon-sc0000587-1575043694:173969..174025Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:174153..174215TCONS_00026774-exon-sc0000587-1491911889:174153..174215Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:174153..174215TCONS_00026774-exon-sc0000587-1510915933:174153..174215Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:174153..174215TCONS_00026774-exon-sc0000587-1575043694:174153..174215Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:174331..174408TCONS_00026774-exon-sc0000587-1491911889:174331..174408Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:174331..174408TCONS_00026774-exon-sc0000587-1510915933:174331..174408Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:174331..174408TCONS_00026774-exon-sc0000587-1575043694:174331..174408Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:174548..174703TCONS_00026774-exon-sc0000587-1491911889:174548..174703Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:174548..174703TCONS_00026774-exon-sc0000587-1510915933:174548..174703Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:174548..174703TCONS_00026774-exon-sc0000587-1575043694:174548..174703Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:175127..175642TCONS_00026774-exon-sc0000587-1491911889:175127..175642Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:175127..175642TCONS_00026774-exon-sc0000587-1510915933:175127..175642Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:175127..175642TCONS_00026774-exon-sc0000587-1575043694:175127..175642Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:175996..176172TCONS_00026774-exon-sc0000587-1491911889:175996..176172Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:175996..176172TCONS_00026774-exon-sc0000587-1510915933:175996..176172Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:175996..176172TCONS_00026774-exon-sc0000587-1575043694:175996..176172Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:176295..176463TCONS_00026774-exon-sc0000587-1491911889:176295..176463Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:176295..176463TCONS_00026774-exon-sc0000587-1510915933:176295..176463Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:176295..176463TCONS_00026774-exon-sc0000587-1575043694:176295..176463Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:176607..176806TCONS_00026774-exon-sc0000587-1491911889:176607..176806Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:176607..176806TCONS_00026774-exon-sc0000587-1510915933:176607..176806Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:176607..176806TCONS_00026774-exon-sc0000587-1575043694:176607..176806Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1491911889:176943..180039TCONS_00026774-exon-sc0000587-1491911889:176943..180039Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1510915933:176943..180039TCONS_00026774-exon-sc0000587-1510915933:176943..180039Clytia hemisphaericaexon
TCONS_00026774-exon-sc0000587-1575043694:176943..180039TCONS_00026774-exon-sc0000587-1575043694:176943..180039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:168917..180039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.688454	0.656909	0.0242503	0.310701	1.66468	0.869918	0.577914	1.48059	1.54799	1.62571	1.77672	1.17404	0.96051	1.29733	0.667608	0.68857	0.875516	0.596493	1.1973	0.364557	1.28245	1.72244	0.254835	0.74305	1.81395	1.77422	2.15392	2.06665	0.799047	1.51693
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026774 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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