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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026768 ID=TCONS_00026768|Name=TCONS_00026768|organism=Clytia hemisphaerica|type=transcript|length=1256bp
cccactttcgttttcgtttttacAAAAACCGCGCTCCTTCTAAATTGTAG
ACTAGCAAGTATCCGTATTGCGTATTGTATTCAGTGAAGGGAGTGACTCT
GTTGCAAGCGCAGCTGCAGAGTGAAATACAACGACTAGTTACTAGTCTAT
ctaagttgttgttgttgtagatCTCGCGCTCTTTGCATTTTATAGCCCAA
AATGGCGGATTAAGTGGagacaaagtttttttctcCTCCTGAAATATCAG
ACCAACTCTGACATTTTCAGACGCTGTTGTTTCATTGATTGTTGCTATTT
ACAGATTTATTGATATACAATCATTATTTTTCGTGATTATTCATCCTTTT
ACTGTGTTGTTTGCTGCTTGCTCATTTGTAAAACAAgagggGTTGGATGT
TCAAGCATTGTCCACCATATGAAATGATAAACAACAGAAAGTGGCAGTAT
CCTATTCATTCAAAAAACGGTTTGTGGTGCCAAAGATATTTATTGAATGA
GAAATGCATGCAGCAAAGAGGGTGAAATATTGACAACAAGTATTGAGAAA
GCGAAATCTTTACTTCAGAAGAAATAACATCCACCTTTTTTTTCCGTATC
TTTACTTCAGAAGTATCATTATATATCTTCGTTTTACGTACCAATCATTT
TAAATCCTATCCCGAGCAAGGAGATAACGATGAGTGAGACAAGAAGAATA
AAGTAACAGATCAGAAAGGACACTGAGATGAgatgcttttaaaattgcat
tgGTGAGATTTATAAGCACCTTTAAAAGCTTAAATAAACTTAACCATCAC
TTAAGGCAACTTTTCAGAAATCGATAGAAAGTGGAGCACCAAATTATTCG
TTCCCGCTGTCAAGCATGTTatgttggaaaaaatctactGTAATCAATTA
CATTTTTAAGAACACAAGAGATGAAACATTCCAGTGGAAATGCACTTACA
ATTGATGACGtacaaatttttgcaaaatcgaACAAATCAGAGTAACATTT
ATGGCCCTAGAGGCACTTTATATAAAAGTCATTGAACTTTCAATTAACAT
TTAAGACGTGTCATTAGTCATtaatgttattgtttttatagcatttttac
tgtttttaactTATCATTTTGTATCATTTATACCTGATGACTATGTTAAG
ACATCAAAATATATTattgtcaaaattaaattttgatcaaagcaccaaaa
tttcttcaaaagttcacaatattttttaccaaagaGATTAAAATGATATA
AATAAG Run BLAST on NCBI transcript from alignment at sc0000587:168223..171225+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026768 ID=TCONS_00026768|Name=TCONS_00026768|organism=Clytia hemisphaerica|type=transcript|length=3003bp|location=Sequence derived from alignment at sc0000587:168223..171225+ (Clytia hemisphaerica)
cccactttcgttttcgtttttacAAAAACCGCGCTCCTTCTAAATTGTAG
ACTAGCAAGTATCCGTATTGCGTATTGTATTCAGTGAAGGGAGTGACTCT
GTTGCAAGCGCAGCTGCAGAGTGAAATACAACGACTAGTTACTAGTCTAT
ctaagttgttgttgttgtagatCTCGCGCTCTTTGCATTTTATAGCCCAA
AATGGCGGATTAAGTGGagacaaagtttttttctcCTCCTGAAATATCAG
ACCAACTCTGACATTTTCAGACGCTGTTGTTTCATTGATTGTTGCTATTT
ACAGATTTATTGATATACAATCATTATTTTTCGTGATTATTCATCCTTTT
ACTGTGTTGTTTGCTGCTTGCTCATTTGTAAAACAAgaggtatgtatttt
ttttggaataaaatttttcagatCGAGTGTAGACAGTCAGTTCCGCTAAA
GAATCCTGCAAGTGCTATAAATAGATTTTTCTTCCCGATGTTAACCGATT
CGGATTTATATCGGTAATTATCCCCGATACCCAACGGCGGGAatctaaaa
atggtagaaaagctCCGGTGactatgaaatatttttctgaaaagtaaTAC
TGGTACATCTTGAAACCCTTGAACTTTGTTAGCCAGTACCTGCTGTGCAG
CCACCTAATCAGCATCTAACAGCAAACAAATTGAAGAATTCTATCAGCAT
TCATCAATTATTTATCCAAGATCAGGTATGATTCAGTTTCCCACTCACTC
TGTCAGTCATTGATAACATAACAAAATGATGGCAAAAATCCTTTTCAGTC
CTTTTCTAGGTGGACCCTGCCCTTCCTTCCATCTTGGGGAATGTTAGTCA
TATTAAGAACCAGCTAAAAAGTTTGTTAAAGATTAAGGGATGCTCTTTGC
TTACAAGCGAAGTAAATTATATAAAGTGCTGGAGTTTTTGGCTGAATGTC
AAATGAAATGTGCCCGTCTATTGAGTGACTACTAGCTAGCAGCACAAATA
CTAATCTCTACAATCTATGTAAATCATTTTTTCTCTATGCAATAGCTGTG
TTGAAAGAGAAAAATCAATTACATGGAATAtatcatttataaaaaaattt
atgttgATAATAATTAGCTCATTCTCATTCAATAGACCGTTGTAATTGCC
TTACAAGCTACATAAAAAACTATTATTTACTTGAGACTTGACTTTTAAAG
CAAAGAATCTAGCACGATATCTAAAGGGATTAATGAAAACTAAATGGTAC
TTTTTAATacagtaatttttttattataaagcaCTCTGGGCAATCTTATT
GTATATatatgggctcttccagaaaaatttgtcgacatctgtcttctaat
ttcgacacccttctttagagataggaacaatagaaactgaggaaggtcag
aattgctgattgactttgattagcgcgatgagaggaaaaatctttagact
atcagtgatttcgaccttcttattattcctatctataaagaaggatgtcg
aaataaGAAGacagatgtcgacattagaccaacttacggtagggGGTGGA
CGCCaggaattttcagataaaaaaagcactcggaaatccagtcaattttt
caaaatgcttCGGAAATTtcactcaattttttatttgaacccTTGCAAAT
TTCACATACTgtaatttgtcaaaattttgaaaaaagtatctgaaattcca
gatttttctgccaaaaatttgattttgtattggaaatccagGAGTTTTAA
TAGATGTATTGGCGAATGCGCCAGTCTTttaaataactaattactctaca
tacattactttccctcagccaataaaaacatgataaattatcttgtctct
aggtaactgttgtggagtaattagttattcaaaagaggGTAGCCTAAGCC
AAAAGCTATtgcttttgtattggaaatccaggaatttcaaaaaaacattt
tgcctcAGAATTTTGctgtcgtccacccccctgtaatGGACTTTAACTGG
AATTGAGCCCAAGAACAAATTTTAGCTGTTGGTTGTTTGCATGACATTGT
TCTCCCAAGAAATGAAATTCCAGAAGGGggctataattttttttgcaatt
ttgcaagAAGTTTGatttgagttgttttttttcaagggGTTGGATGTTCA
AGCATTGTCCACCATATGAAATGATAAACAACAGAAAGTGGCAGTATCCT
ATTCATTCAAAAAACGGTTTGTGGTGCCAAAGATATTTATTGAATGAGAA
ATGCATGCAGCAAAGAGGGTGAAATATTGACAACAAGTATTGAGAAAGCG
AAATCTTTACTTCAGAAGAAATAACATCCACCTTTTTTTTCCGTATCTTT
ACTTCAGAAGTATCATTATATATCTTCGTTTTACGTACCAATCATTTTAA
ATCCTATCCCGAGCAAGGAGATAACGATGAGTGAGACAAGAAGAATAAAG
TAACAGATCAGAAAGGACACTGAGATGAgatgcttttaaaattgcattgG
TGAGATTTATAAGCACCTTTAAAAGCTTAAATAAACTTAACCATCACTTA
AGGCAACTTTTCAGAAATCGATAGAAAGTGGAGCACCAAATTATTCGTTC
CCGCTGTCAAGCATGTTatgttggaaaaaatctactGTAATCAATTACAT
TTTTAAGAACACAAGAGATGAAACATTCCAGTGGAAATGCACTTACAATT
GATGACGtacaaatttttgcaaaatcgaACAAATCAGAGTAACATTTATG
GCCCTAGAGGCACTTTATATAAAAGTCATTGAACTTTCAATTAACATTTA
AGACGTGTCATTAGTCATtaatgttattgtttttatagcatttttactgt
ttttaactTATCATTTTGTATCATTTATACCTGATGACTATGTTAAGACA
TCAAAATATATTattgtcaaaattaaattttgatcaaagcaccaaaattt
cttcaaaagttcacaatattttttaccaaagaGATTAAAATGATATAAAT
AAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026768-exon-sc0000587-1491911889:168223..168611 | TCONS_00026768-exon-sc0000587-1491911889:168223..168611 | Clytia hemisphaerica | exon |
| TCONS_00026768-exon-sc0000587-1510915933:168223..168611 | TCONS_00026768-exon-sc0000587-1510915933:168223..168611 | Clytia hemisphaerica | exon |
| TCONS_00026768-exon-sc0000587-1575043694:168223..168611 | TCONS_00026768-exon-sc0000587-1575043694:168223..168611 | Clytia hemisphaerica | exon |
| TCONS_00026768-exon-sc0000587-1491911889:170359..171225 | TCONS_00026768-exon-sc0000587-1491911889:170359..171225 | Clytia hemisphaerica | exon |
| TCONS_00026768-exon-sc0000587-1510915933:170359..171225 | TCONS_00026768-exon-sc0000587-1510915933:170359..171225 | Clytia hemisphaerica | exon |
| TCONS_00026768-exon-sc0000587-1575043694:170359..171225 | TCONS_00026768-exon-sc0000587-1575043694:170359..171225 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000587 | supercontig | sc0000587:168223..171225 + |
Blast
The following BLAST results are available for this feature:
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