TCONS_00017250-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017250-protein
Unique NameTCONS_00017250-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length206

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017250-protein ID=TCONS_00017250-protein|Name=TCONS_00017250-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MTTEKVWKLEKYGRFVQSNNQNTQGIQGKWQLYSSTEDAPLCISLKRPLN
LILQHGKEVLESFSLIKSKEWLKVINKTDSVLFLCKKEDKVRRFRIKFTD
GVQQCNAFIDSIANHTNVQRIIETSSQKVTSSKMEISPSGPQIITVKSLT
QSVMNNGEGLPEQYQSNINITSNETITTNLVKTCLLDVNFPTFVESIEKT
LDTMLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009651XLOC_009651Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017250TCONS_00017250Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029168REC114L
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029168Meiotic recombination protein REC114-likePFAMPF15165REC114-likecoord: 7..128
e-value: 6.6E-21
score: 75.1
coord: 137..202
e-value: 4.2E-10
score: 39.7

Blast
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BLAST of TCONS_00017250-protein vs. Swiss-Prot (Human)
Match: RE114 (Meiotic recombination protein REC114 OS=Homo sapiens GN=REC114 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 7.300e-18
Identity = 62/243 (25.51%), Postives = 108/243 (44.44%), Query Frame = 0 
Query:    7 WKLEKYGRFVQSNNQNTQG--IQGK------WQLYSSTEDAP-LCISLKRPLNLILQHGKEVLESFSLIKSKEWLKVINKTDSVLFLCKKEDKVRRFRIKFTD-----GVQQCNAFIDSIANHTNVQ---------RIIE-----TSSQKVTSSKMEISPSGPQIITVKSLTQSVMNNGEGLPEQYQSNINITSNETITTNL-----------------VKTCLLDVNFPTFVESIEKTLDTM 204
            W L++Y R + SN ++  G  ++        W+++ S E++  L +++    +  +  G+ +LE FSLI SK+WLK++ + D +LF    +DK R FR++F+       ++ C + +  +A +  VQ         ++I      T SQ   S+K    P  P         Q  +  G G P+   S   +      +  L                 ++ CL+D NFP FVE +EK L  +
Sbjct:   21 WPLQRYARCIPSNTRDPPGPCLEAGTAPCPTWKVFDSNEESGYLVLTIVISGHFFIFQGQTLLEGFSLIGSKDWLKIVRRVDCLLFGTTIKDKSRLFRVQFSGESKEQALEHCCSCVQKLAQYITVQVPDGNIQELQLIPGPPRATESQGKDSAKS--VPRQPGSHQHSEQQQVCVTAGTGAPDGRTSLTQLAQTLLASEELPHVYEQSAWGAEELGPFLRLCLMDQNFPAFVEEVEKELKKL 261
The following BLAST results are available for this feature:
BLAST of TCONS_00017250-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RE1147.300e-1825.51Meiotic recombination protein REC114 OS=Homo sapie... [more]
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