TCONS_00017250 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017250
Unique NameTCONS_00017250
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1785

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017250 ID=TCONS_00017250|Name=TCONS_00017250|organism=Clytia hemisphaerica|type=transcript|length=1785bp
CTTCTGCGGTGGAGTTATCGTGATCTCGAAGAAAATCTTCGATCAAAAAG
TTAATTGTGTACAATTTAACATAAATGCTGCAAGTATAAACTAAGCAATG
ACAACGGAAAAAGTTTGGAAACTTGAAAAATATGGTCGTTTTGTTCAGTC
CAACAACCAAAACACTCAAGGAATTCAGGGAAAGTGGCAACTATACTCAA
GTACAGAGGACGCACCGTTATGTATCTCGCTGAAAAGgcctttgaatttg
attttacaACATGGAAAGGAGGTTTTAGAATCATTCAGTTTGATCAAATC
GAAAGAATGGCTGAAGGTGATCAACAAGACAGATAGTGTTTTGTTCCTTT
GCAAGAAAGAGGACAAAGTTCGTCGATTTCGCATCAAGTTTACGGACGGT
GTCCAACAATGTAATGCTTTCATCGATTCCATCGCAAATCATACAAATGT
GCAACGAATCATCGAGACATCTTCGcaaaaagtgacgtcatcaaaaatgg
aGATATCTCCTTCTGGTCCGCAAATTATTACCGTCAAGTCACTAACTCAG
AGTGTAATGAACAATGGTGAAGGTCTACCGGAACAATATCAATCCAACAT
AAACATTACCAGCAATGAGACGATCACCACAAACCTGGTGAAAACTTGTC
TTTTGGATGTCAACTTTCCTACTTTCGTGGAATCAATTGAAAAGACTCTT
GACACAATGCTTTCTTAGAAAGAACTATCTTGTGTAAAAATAAATTGGAT
TTATGATCCGCAATCCTATGCGACACTCTTCGATTCTGAGAGCTTTCAAT
GACGCTATTGATTGTTTAAAGAGAAAAGGCGACCTAAAGATCTTAGGCCA
TCTTAGCCCTTTGTAGCCTTTAATGGTCAAGATATAAACAGTGACCAGCA
GTAACTGCATGGGcatcaaagtatttttttattgttgaaGCCGTTTATTA
AAAAACTTTGTATAAAATCTTAAGTACAAAATCCCTTGTTAAAATATTTA
CAcaatttacatttatttatttataaaaactgtACATTATAATTTTCGCC
TCGATTTTCCTTGCAATGTATAAAAAAGATCGGGTTGTCAACGCCTCGCT
TATTCAGGAGTTTATGTTGACAACCGTCATAGGTACATGCTTGGTTGACC
GaggcataaaatttctgataaaTAAACTTTAGAATAGATATCCTTGAATA
GACATGACTCCAAAGATTTGTATGATTACATTTGAACTGAAAAGTTGTAT
TTATAAGTTGCAAACaatccccagctggcacacaacgttgttttaacgtt
caaataacgttatttggacgttaagaatgtcacatggacgttgttttgac
gttgtgtgccgtctgggtcACCTCAAATCATACGTGATAAGGAGCTACTA
TCGAGATCTATAATCTACAAATGTCGTCACTGCTTGATGAAAATAACGTC
TTTGTTATGTCGTTATGTCGTCTACTGACTTGTCTGACGGGTTTTCCCTT
TTGAGCGTTTTTGATTTGTTGAATAAGCTTCTTCATCACAGGGAAACCCC
CTTGTGATAATTTGGAAAAGACAATTTGTCCGTTGACGGTAATTTCAAAG
CAACCTGAAGAAATAATGAAGAATGGATGGTAAATACCTAGCACTGCATT
CTGAAAAATTAAGTTCTTGATTTATTAAGGGGACTGATTCTCAATTTTAG
GTGTTTAACACAAAGataagatttttgtcaaaaatccgATAACCTCCAAG
AAGAATGAAGGTTGACAATTTCATTATAAAGTGAG
Run BLAST on NCBI

protein sequence of TCONS_00017250-protein

>TCONS_00017250-protein ID=TCONS_00017250-protein|Name=TCONS_00017250-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MTTEKVWKLEKYGRFVQSNNQNTQGIQGKWQLYSSTEDAPLCISLKRPLN
LILQHGKEVLESFSLIKSKEWLKVINKTDSVLFLCKKEDKVRRFRIKFTD
GVQQCNAFIDSIANHTNVQRIIETSSQKVTSSKMEISPSGPQIITVKSLT
QSVMNNGEGLPEQYQSNINITSNETITTNLVKTCLLDVNFPTFVESIEKT
LDTMLS
Run BLAST on NCBI

transcript from alignment at sc0000261:135216..141952-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017250 ID=TCONS_00017250|Name=TCONS_00017250|organism=Clytia hemisphaerica|type=transcript|length=6737bp|location=Sequence derived from alignment at sc0000261:135216..141952- (Clytia hemisphaerica)
CTTCTGCGGTGGAGTTATCGTGATCTCGAAGAAAATCTTCGATCAAAAAG
TTAATTGTGTACAATTTAACATAAATGCTGCAAGTATAAACTAAGCAATG
ACAACGGAAAAAGTTTGGAAACTTGAAAAATATGGTCGTTTTGTTCAGTC
CAACAACCAAAACACTCAAGGAATTCAGGGAAAGTGGCAAGTAAGTAAAA
AAAGACCCAGGCAATTCAAGGTTCAAGGGGTTTGTTTTGTAACTTGAATC
ATAGTCATAGGCAGTGGCGGCCTGGCAGGGGGTGCAGGGTGTGCAGTGCA
CCACCCAGAAAGATCTGAAAGGGGCGCCAAAAGAGTTTTTCAAGGGGGCG
CCAAAATTTTGTTGATGTTTAATTGGGCGATTTGGTGCCCTTCGACAAGT
TTATAGCGCCTTCTATAAGTGCAATGTTGATTTTTTTCGCCTGCGGCGCT
TCATTTTATTTTACACTCTTGCTTCCTTTCTCTTGAATTTTTTCAAAACT
ATCAACATTGAATCGTGAAAAGTTAAAGCAAGAGAAGGGTTGTGTATCCA
CCAAGGGTTAAAGAGGATGCTGTCCCCCAAAATGAGAGATTGCCAAAAAG
ATCGAAACTTGTTTCAAACCACATTCGTATAAATAAAAGTTTTTTAACTC
AAAGATTCCGGGCGTTACTTTCAACATTCAACCAGTCACCTGCTCTGACT
TTTAATATTTCCACTTATTTATGGAGGGCGCAAGTAAGGACAAAAATATC
AGGGGCGCCAATTTCATAGTTTGCACCACCAAGAAAATTAAGCCAGGTCG
CTACTCATAGGAGAAAGAGTGGAAGAAGTTAGTCCGGCAACACGGGTCGT
ATGCTTGAATAAAGGTTTTTCAGTTTTGTCGAATTTTGCCCACTGATATT
TCCATAAAAAATACGCAGCTTATTGTTTTATATGTTCTAGCTATACTCAA
GTACAGAGGACGCACCGTTATGTATCTCGCTGAAAAGGCCTTTGAATTTG
ATTTTACAACATGGAAAGGAGGTTTTAGTAAGCTATGAATATATGCCGCC
ACAGGCCACCAGTCGTTCGAGCCTAGGGCTGCTGGTTTCAACTAACATAA
TTCATACGGTTTTGTAGAGGTCTGCGATTCAGACTAATGGAGCCCGGGGG
GGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGGGCCGGGGGGGGGGGGGTACTTAGGCTTTTTTGGACTTCCAAAAGT
CCTGCTAAGGGTCGGAAAAATCAGAAAATCAAATTTCAGTCCCACTAAGG
GTCGGAAAAATAGGAAAATTTCAAGTTCAACAACTGGTCAAATTTGTCCC
GCTAAGGGTCGTAAACTTCCCAAAATTTTCCTTTGTTTTCTCCTTTTTAG
TCTCGGTAAGGGTACAACAAAGGTCATAATATTTTGATAATTTTGGTTAT
TTCAACGTTTTTCATAATTTAAAGTTCCGGCGAGAAAGTTGATTTTGGGC
TATCTCTTTAATTTAATCGAATATTTCGATTCGGAATTCTTACAATTTTT
GTATTATAAAGGCTTTCATAGAGCTCTAGGGTCACATTACATGAGATAGA
AAATAGTAGACTTCAACTTTTGACTTTCTTTTGAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGAAT
GGAGCCTGCGCTCCAACTTGAAAAGTTGACCGAAAATTCGACCCCAGTGG
AAAAAATACTCGCTTTTAGATTTCGAGTCCACTGCAGTTCACTGGGAAAG
TCCCCCATGATTTGACAAATCTCCATTGAAAATCGAATGGAAAATATATA
AAACTAACGGCGTTTTTGCGGAAACAATAGATTTTCTGTCTCCATAAGGA
TTACGATAAAAATTTAAACCTCACTCGAAACTTTATAAAATCGACACGTC
TCTATAAACTCAAACTAATCCCCCGAAGTGGTGCTTATACACTAAATCTA
GTCTGATTGCTACAGATCCGGTGAGACCCCTTTACCCTTTCCACTGAAAA
AAATTGAACAAAGAACTAACCCCGGAGGAAAAAAAAACCTAAGGAATTTT
CCAAACCCATCGACAATCGGTCCCGCAATTTTAGCCTCTATCTCGTTACC
GCAATCTGAATCAAAAGTATTAAGTATCAAAGATAAGAAGCACGAGGTCG
TTACATGATGCCGTTACGTGATGCCTAATGGTGCTAATGATGCTAGTGCC
AGCCCAATTCTAATCTGATCCCATAAAATTTCACATTTCAATAGGAATCA
TTCAGTTTGATCAAATCGAAAGAATGGCTGAAGGTGATCAACAAGACAGA
TAGTGTTTTGTTCCTTTGCAAGAAAGAGGTAACCTGAATTTATGACTGGT
TTTTCTTATGAGCTCTGGTTGGCTCAAGGTTCGGCTTGCTAGAAAAGTTC
ACGTGAGCATTAATTGATTTCAACGACGTCAAAAAGGGTTTAACCCAAGT
TTAGCTTCGTTCACCACACTAGCCTGCCTTCTTGCCTGTCTTCCACTGTT
GGGGACACTCGATTTAAAAAGGAAAAAAATGGCCAGATTTTTCAAAATTT
TGCCAAAATTTCTTTTTACATCGACCTCGCTGGTTTTACTATCTTTTTAC
ACCCTTATGCCCTTTATTCCGACCCTTACAGTACATTTTGGGAAGCCTGA
AAAACGCACAGAATCCTTGCACTCTAACACAAATATTCACAGAAAACGTG
TTCAGGTTATGGAAAATTCGACTTTTTGATTGAGCCCCACGGTAAGAAGG
CGTTCGTGTTCATTCATAATTTTCAAAATTGACATCTGCAAAAATAGAAT
TATTTCTCTCGTCCATCATACAAACTTTTAATCAATCAATCATCAATCAA
TAGGACAAAGTTCGTCGATTTCGCATCAAGTTTACGGACGGTGTCCAACA
ATGTAATGCTTTCATCGATTCCATCGCAAATCATACAAATGTGCAACGAA
TCATCGAGACATCTTCGCAAAAAGTGACGTCATCAAAAATGGAGATATCT
CCTTCTGGTCCGCAAATTATTACCGTCAAGTCACTAACTCAGGTATAAAA
CTTTTAAGTTTATGGCGTCATTACTATGTACACCCCTGTGTTACAGACCC
GCTGGGACCCCAGCCCCACTGGAAAATTTGGTATAAGTTTCGTCCACGGT
GGGAAAAATACCCTAGACTTTCAGCCCCACTCCGAAATTGACTTTGATTT
TATCCCTATTCGAAATTCCATGTTTTAAATTGCACTCCAAAACCATCCCC
ACTGGATATCTTAAACTTGGAACAATCAAACCCTGGAACAATAGGATTTC
TATCCCCCATTGCGATTTCAATAGGAATTTTATCCTCACTGAGGGAAAAA
GTTCCACCGGGGCTATGAGACAGGGGTGTCTATGTAGTTAAAACTTAAAG
TCTAATGAAGCGAATCAGTTTGTAGAAAAAGGTAAGAATACTATTGGGGA
ACCATTGAACTTGATCAACACTCTTACTGTTTCTCGTCAGCCTCGTACCC
CTCCCGCCTCTCCGCCATTGATTCGCCCTGGCTTTCGAGGTTAGATTCTC
ATTAAAAGGAACAATGGAGGAAGGATGTCAGAAAGGGTTATGTGAGTCAT
AAACTACAATTCATGATATTCAAGACGTTGTGCTTTCTTCGGAAGCATCC
AGGTTTTTAACAGTAGTGGCGAATCTAAGAAATTTAAGCTAGAGAAAAAT
GGTTTAAAATTTGCCCCTCCTGGTAAGTCCGGGGAGATTCCGTAGAAAAC
ATTACGTAATGAATATCATGAATACTTTGTGTTTTCAGAGTGTAATGAAC
AATGGTGAAGGTCTACCGGAACAATATCAATCCAACATAAACATTACCAG
CAATGAGACGATCACCACAAACCTGGTGAAAACTTGTCTTTTGGATGTCA
ACTTTCCTACTTTCGTGGAATCAATTGAAAAGACTCTTGACACAATGCTT
TCTTAGAAAGAACTATCTTGTGTAAAAATAAATTGGATTTATGATCCGCA
ATCCTATGCGACACTCTTCGATTCTGAGAGCTTTCAATGACGCTATTGAT
TGTTTAAAGAGAAAAGGCGACCTAAAGATCTTAGGCCATCTTAGCCCTTT
GTAGCCTTTAATGGTCAAGATATAAACAGTGACCAGCAGTAACTGCATGG
GCATCAAAGTATTTTTTTATTGTTGAAGCCGTTTATTAAAAAACTTTGTA
TAAAATCTTAAGTACAAAATCCCTTGTTAAAATATTTACACAATTTACAT
TTATTTATTTATAAAAACTGTACATTATTAGGGTGGGGCGTCAAATGTCA
AAGTCAGAAAATTCAAGATGTAGTGTTTTTTTATGAAAATTTAACCTATT
GTGAGGCATTCTGCGCAATTTTTAAGGTCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCGAACCCCCCTGGGGG
TACTGATTCGCACTACAGGCAAAAATTGGAAAAAATGGCATTTTCTGGCC
TTTTCAGGCCTGTAAATATGTTAAAACTATTGCAAATCTTATTTTTTTCA
TTTGCTGTACTAAACTTTATGAAGAAACAAAAAAATAATCATATTGGGTT
GAAAATTGTGCCCATTGGAGCCCTAAATGAGTCGTTTTAAGCCAATTTTG
GGTAGCAAAATGCTTTTTAAGGCCAATTTTGCAAGCTCATAAACTTTAAA
CTGATTAAATCACATGTCTGAAATTTTCAGAGATGAAAGTCTTCAATAAA
GTCTTTAAGCAAAATGAATTTCAAGTTTTTCACTTTTTTTAAAAATTCAT
TATGGCGTCTTCAAAAATTGCTTTTTAGCAAAAAAAAAAATCATATTTAT
CAAAAAATAGCATTTTTAAGGCATTCATTTTGCTTAAAGACTTTATTGAA
GACTTTCATCTCTGAAAATTTCAGACATGTGATTTAATCAGTTTAAAGTT
TATGAGCTTGCAAAATTGGCCTTAAAAACCATTTTGCTACCCAAAATTGG
CTTAAAACGGCTCGTTTAGGGCTCTAATGGGCACAATTTTCAACCCAATA
TGATTATTTTTTTGTTTCTTCATAAAGTTTANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAATGAAAAAAATAAGATTTGCAATAGTTTTGACATATTTACAGGCCTGA
AAAGGCCAGAAAATGCCATTTTTTCCAATTTTTGCCTGTAGTGCGAATCA
GTACCCCCAGGGGGGTTCGGCCAATTTTGGANNNNNNNNNNNNNNNNNNN
NNNNCGGCCAATTTTGGACTTCTGACCTTAAAAATTGCGCAGAATGCCTC
ACAATAGGTTAAATTTTCATAAAAAAACACTACATCTTGAATTTTTTGAC
TTTGCCCCACAAATGACTGTTGACGCCCTACCCTAACATTATAATTTTCG
CCTCGATTTTCCTTGCAATGTATAAAAAAGATCGGGTTGTCAACGCCTCG
CTTATTCAGGAGTTTATGTTGACAACCGTCATAGGTACATGCTTGGTTGA
CCGAGGCATAAAATTTCTGATAAATAAACTTTAGAATAGATATCCTTGAA
TAGACATGACTCCAAAGATTTGTATGATTACATTTGAACTGAAAAGTTGT
ATTTATAAGTTGCAAACAATCCCCAGCTGGCACACAACGTTGTTTTAACG
TTCAAATAACGTTATTTGGACGTTAAGAATGTCACATGGACGTTGTTTTG
ACGTTGTGTGCCGTCTGGGTCACCTCAAATCATACGTGATAAGGAGCTAC
TATCGAGATCTATAATCTACAAATGTCGTCACTGCTTGATGAAAATAACG
TCTTTGTTATGTCGTTATGTCGTCTACTGACTTGTCTGACGGGTTTTCCC
TTTTGAGCGTTTTTGATTTGTTGAATAAGCTTCTTCATCACAGGGAAACC
CCCTTGTGATAATTTGGAAAAGACAATTTGTCCGTTGACGGTAATTTCAA
AGCAACCTGAAGAAATAATGAAGAATGGATGGTAAATACCTAGCACTGCA
TTCTGAAAAATTAAGTTCTTGATTTATTAAGGGGACTGATTCTCAATTTT
AGGTGTTTAACACAAAGATAAGATTTTTGTCAAAAATCCGATAACCTCCA
AGAAGAATGAAGGTTGACAATTTCATTATAAAGTGAG

Coding sequence (CDS) from alignment at sc0000261:135216..141952-

>TCONS_00017250 ID=TCONS_00017250|Name=TCONS_00017250|organism=Clytia hemisphaerica|type=CDS|length=3105bp|location=Sequence derived from alignment at sc0000261:135216..141952- (Clytia hemisphaerica)
AGTGTAATGAACAATGGTGAAGGTCTACCGGAACAATATCAATCCAACAT
AAACATTACCAGCAATGAGACGATCACCACAAACCTGGTGAAAACTTGTC
TTTTGGATGTCAACTTTCCTACTTTCGTGGAATCAATTGAAAAGACTCTT
GACACAATGCTTTCTTAGGACAAAGTTCGTCGATTTCGCATCAAGTTTAC
GGACGGTGTCCAACAATGTAATGCTTTCATCGATTCCATCGCAAATCATA
CAAATGTGCAACGAATCATCGAGACATCTTCGCAAAAAGTGACGTCATCA
AAAATGGAGATATCTCCTTCTGGTCCGCAAATTATTACCGTCAAGTCACT
AACTCAGGAATCATTCAGTTTGATCAAATCGAAAGAATGGCTGAAGGTGA
TCAACAAGACAGATAGTGTTTTGTTCCTTTGCAAGAAAGAGCTATACTCA
AGTACAGAGGACGCACCGTTATGTATCTCGCTGAAAAGGCCTTTGAATTT
GATTTTACAACATGGAAAGGAGGTTTTAATGACAACGGAAAAAGTTTGGA
AACTTGAAAAATATGGTCGTTTTGTTCAGTCCAACAACCAAAACACTCAA
GGAATTCAGGGAAAGTGGCAAAGTGTAATGAACAATGGTGAAGGTCTACC
GGAACAATATCAATCCAACATAAACATTACCAGCAATGAGACGATCACCA
CAAACCTGGTGAAAACTTGTCTTTTGGATGTCAACTTTCCTACTTTCGTG
GAATCAATTGAAAAGACTCTTGACACAATGCTTTCTTAGGACAAAGTTCG
TCGATTTCGCATCAAGTTTACGGACGGTGTCCAACAATGTAATGCTTTCA
TCGATTCCATCGCAAATCATACAAATGTGCAACGAATCATCGAGACATCT
TCGCAAAAAGTGACGTCATCAAAAATGGAGATATCTCCTTCTGGTCCGCA
AATTATTACCGTCAAGTCACTAACTCAGGAATCATTCAGTTTGATCAAAT
CGAAAGAATGGCTGAAGGTGATCAACAAGACAGATAGTGTTTTGTTCCTT
TGCAAGAAAGAGCTATACTCAAGTACAGAGGACGCACCGTTATGTATCTC
GCTGAAAAGGCCTTTGAATTTGATTTTACAACATGGAAAGGAGGTTTTAA
TGACAACGGAAAAAGTTTGGAAACTTGAAAAATATGGTCGTTTTGTTCAG
TCCAACAACCAAAACACTCAAGGAATTCAGGGAAAGTGGCAAAGTGTAAT
GAACAATGGTGAAGGTCTACCGGAACAATATCAATCCAACATAAACATTA
CCAGCAATGAGACGATCACCACAAACCTGGTGAAAACTTGTCTTTTGGAT
GTCAACTTTCCTACTTTCGTGGAATCAATTGAAAAGACTCTTGACACAAT
GCTTTCTTAGGACAAAGTTCGTCGATTTCGCATCAAGTTTACGGACGGTG
TCCAACAATGTAATGCTTTCATCGATTCCATCGCAAATCATACAAATGTG
CAACGAATCATCGAGACATCTTCGCAAAAAGTGACGTCATCAAAAATGGA
GATATCTCCTTCTGGTCCGCAAATTATTACCGTCAAGTCACTAACTCAGG
AATCATTCAGTTTGATCAAATCGAAAGAATGGCTGAAGGTGATCAACAAG
ACAGATAGTGTTTTGTTCCTTTGCAAGAAAGAGCTATACTCAAGTACAGA
GGACGCACCGTTATGTATCTCGCTGAAAAGGCCTTTGAATTTGATTTTAC
AACATGGAAAGGAGGTTTTAATGACAACGGAAAAAGTTTGGAAACTTGAA
AAATATGGTCGTTTTGTTCAGTCCAACAACCAAAACACTCAAGGAATTCA
GGGAAAGTGGCAAAGTGTAATGAACAATGGTGAAGGTCTACCGGAACAAT
ATCAATCCAACATAAACATTACCAGCAATGAGACGATCACCACAAACCTG
GTGAAAACTTGTCTTTTGGATGTCAACTTTCCTACTTTCGTGGAATCAAT
TGAAAAGACTCTTGACACAATGCTTTCTTAGGACAAAGTTCGTCGATTTC
GCATCAAGTTTACGGACGGTGTCCAACAATGTAATGCTTTCATCGATTCC
ATCGCAAATCATACAAATGTGCAACGAATCATCGAGACATCTTCGCAAAA
AGTGACGTCATCAAAAATGGAGATATCTCCTTCTGGTCCGCAAATTATTA
CCGTCAAGTCACTAACTCAGGAATCATTCAGTTTGATCAAATCGAAAGAA
TGGCTGAAGGTGATCAACAAGACAGATAGTGTTTTGTTCCTTTGCAAGAA
AGAGCTATACTCAAGTACAGAGGACGCACCGTTATGTATCTCGCTGAAAA
GGCCTTTGAATTTGATTTTACAACATGGAAAGGAGGTTTTAATGACAACG
GAAAAAGTTTGGAAACTTGAAAAATATGGTCGTTTTGTTCAGTCCAACAA
CCAAAACACTCAAGGAATTCAGGGAAAGTGGCAAAGTGTAATGAACAATG
GTGAAGGTCTACCGGAACAATATCAATCCAACATAAACATTACCAGCAAT
GAGACGATCACCACAAACCTGGTGAAAACTTGTCTTTTGGATGTCAACTT
TCCTACTTTCGTGGAATCAATTGAAAAGACTCTTGACACAATGCTTTCTT
AGGACAAAGTTCGTCGATTTCGCATCAAGTTTACGGACGGTGTCCAACAA
TGTAATGCTTTCATCGATTCCATCGCAAATCATACAAATGTGCAACGAAT
CATCGAGACATCTTCGCAAAAAGTGACGTCATCAAAAATGGAGATATCTC
CTTCTGGTCCGCAAATTATTACCGTCAAGTCACTAACTCAGGAATCATTC
AGTTTGATCAAATCGAAAGAATGGCTGAAGGTGATCAACAAGACAGATAG
TGTTTTGTTCCTTTGCAAGAAAGAGCTATACTCAAGTACAGAGGACGCAC
CGTTATGTATCTCGCTGAAAAGGCCTTTGAATTTGATTTTACAACATGGA
AAGGAGGTTTTAATGACAACGGAAAAAGTTTGGAAACTTGAAAAATATGG
TCGTTTTGTTCAGTCCAACAACCAAAACACTCAAGGAATTCAGGGAAAGT
GGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009651XLOC_009651Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017250-exon-sc0000261-1575043694:141763..141952TCONS_00017250-exon-sc0000261-1575043694:141763..141952Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1575043694:140926..141012TCONS_00017250-exon-sc0000261-1575043694:140926..141012Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1575043694:139175..139258TCONS_00017250-exon-sc0000261-1575043694:139175..139258Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1575043694:138461..138649TCONS_00017250-exon-sc0000261-1575043694:138461..138649Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1575043694:137230..137714TCONS_00017250-exon-sc0000261-1575043694:137230..137714Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1575043694:135216..135965TCONS_00017250-exon-sc0000261-1575043694:135216..135965Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:141763..141952TCONS_00017250-exon-sc0000261-1510915933:141763..141952Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:140926..141012TCONS_00017250-exon-sc0000261-1510915933:140926..141012Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:139175..139258TCONS_00017250-exon-sc0000261-1510915933:139175..139258Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:138461..138649TCONS_00017250-exon-sc0000261-1510915933:138461..138649Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:137230..137714TCONS_00017250-exon-sc0000261-1510915933:137230..137714Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1510915933:135216..135965TCONS_00017250-exon-sc0000261-1510915933:135216..135965Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:141763..141952TCONS_00017250-exon-sc0000261-1491911889:141763..141952Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:140926..141012TCONS_00017250-exon-sc0000261-1491911889:140926..141012Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:139175..139258TCONS_00017250-exon-sc0000261-1491911889:139175..139258Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:138461..138649TCONS_00017250-exon-sc0000261-1491911889:138461..138649Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:137230..137714TCONS_00017250-exon-sc0000261-1491911889:137230..137714Clytia hemisphaericaexon
TCONS_00017250-exon-sc0000261-1491911889:135216..135965TCONS_00017250-exon-sc0000261-1491911889:135216..135965Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017250-proteinTCONS_00017250-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:135216..141952 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0259673	0.0654223	0.0885422	0.319665	0.23612	1.04101	0.372657	0.466142	0.467606	0.765792	0.391683	0.652072	0.656646	0.613884	0.436643	0.638485	0.587648	1.21706	1.72134	0.816422	1.82975	0.639811	0.766842	18.1032	16.7175	2.20667	3.7971	0.181169	0.16225
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029168REC114L
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017250 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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