TCONS_00016866-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016866-protein
Unique NameTCONS_00016866-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length501

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016866-protein ID=TCONS_00016866-protein|Name=TCONS_00016866-protein|organism=Clytia hemisphaerica|type=polypeptide|length=501bp
SSHPDLVNTTFSYRPDLMAPWSRNGENIQITGKTGHLVSGRKLLKPFAGE
EEIKSSDHQQIVWDDIISPFFDLHQLPTIFEPNSGFHPGAPFPCPQKLLT
FNPHYWKPTMHFGQGLFYCFAHTMNHALQNGGKMGADLDRPVPMQYLSFD
GTTLYFLWYQLNTLDFENEGSIKNMAWRQELKLFDNVTEIVEKRAEGPTD
YNDYVGKRMSLVDFDRKRLTETLENEHTVRVGIYGFNPDAAKRQSHPNTD
SSIITNTVTGNVRADSKGKAGGGAKSAAGAAAASDSSSESQTFTNTKVNT
RIATSSNARSGANAAAKVKTYANAKTNTKVETKQQKPMTFPPTTPPQNTK
MSPNDYNTGNGTGPCPCQNSTTIIQVVCPNCTCPCPPNSPPTTPSGETTP
KLTTPSGETTPQLTTPSSTTITTTKGSTTTPSGGYTTPYPWYTTCSPCPP
CTPPCLPPCTPYPPCCPPCQLPVCYQAQCPYDKRSTLMKMFSYLFGRNKE
N
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009441XLOC_009441Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016866TCONS_00016866Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010793Ribosomal_L37/S30
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010793Ribosomal protein L37/S30PFAMPF07147PDCD9coord: 114..189
e-value: 3.5E-6
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..352

Blast
[Close]
BLAST of TCONS_00016866-protein vs. Swiss-Prot (Human)
Match: RM37 (39S ribosomal protein L37, mitochondrial OS=Homo sapiens GN=MRPL37 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 6.162e-16
Identity = 52/183 (28.42%), Postives = 83/183 (45.36%), Query Frame = 0 
Query:    2 SHPDLVNTTFSYRPDLMAPWSRNGENIQITGKTGHLVSGRKLLKPFAGEEEIKSSDHQQIVWDDIISPFFDLHQLPTIFEP--NSGFHPGAPFPCPQKLLTFN-----PHYWKPTMHFGQGLFYCFAHTMNHALQNGGKMGADLDRPVPMQYLSFDGTTLYFLWYQLNTLDFENEGSIKNMAW 177
             HP L            A W+R    +Q+ G  G  +S +  L   A  EEI+++ +  +     ISP  DLH+   I++   ++GF  G P+P P  L   +     PH  +P     + + + F   +  A    G     L++PV +Q +  DG   +FL +QLNT D +    +KN+AW
Sbjct:  194 KHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHEC-NIYDVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGNDAKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDCNEGVKNLAW 375
The following BLAST results are available for this feature:
BLAST of TCONS_00016866-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RM376.162e-1628.4239S ribosomal protein L37, mitochondrial OS=Homo s... [more]
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