TCONS_00015100-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015100-protein
Unique Name	TCONS_00015100-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	624

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015100-protein ID=TCONS_00015100-protein|Name=TCONS_00015100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=624bp
MEMQDQLAGHRDIECGSQTKTRLDRRKMKSWMFSVLVLLVCFFAQALSMG
FYVSFGTMFVEIIEIFNTTETRAAWVGSIALSVCFVLGTFSSYVSKKYGH
GLVISIGGAFLGLGLLLSSLVADVLSLTLTFSGVTSIGCSLLYFASLSCL
PCYFKSNLCIMTSIVCSGSNFSGITFSPLMANLIKQYNLRICFQMFSITA
LIPIIGGLIIHKYSTQPSEKEXIGGLIIHKYSIQPSEKESEHSLLQNEEK
EEGSPYSSLFNNRNYLLVLLSMSLIELCYFIPYIHLVNYGIHHGVSLLQA
SWLPVILSIGGWCGKIIFGIIGQNKYINITYLFQVFLLAMAVCLTLLPLA
TTFNQLTIFSVVYGVFDGGFTGFILPLVATTVPSKHVGIAVGTLYSSISI
ELLFGAPLAGFLYNATKSYAVPFILCGAILLTSAVILFCIHDNNSNKRNK
GCHRTNNVEKKQTLEKVKNFLEHFKLNLHLEQLLIFFKLDNYGETSEEHE
EHKTVLLPIDHQQNLKSSLSRLPLDSDEGTKDTNNNSINSALQHEGEQLS
PENEQATEKKHSIVEFINNEPICSLIHKMDGEETSSFHQLQIFINSYFSI
ITHMLVPTNWRLSQNLMSENSTPC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008462	XLOC_008462	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015100	TCONS_00015100	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 241..475 e-value: 6.0E-25 score: 87.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 25..222 e-value: 5.7E-14 score: 51.3
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 42..351 e-value: 4.6E-18 score: 65.2
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 34..445 score: 9.442
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 38..440 e-value: 3.03253E-25 score: 105.474
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 27..219 coord: 246..447

Blast

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BLAST of TCONS_00015100-protein vs. Swiss-Prot (Human)
Match: MOT13 (Monocarboxylate transporter 13 OS=Homo sapiens GN=SLC16A13 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.336e-37
Identity = 116/437 (26.54%), Postives = 192/437 (43.94%), Query Frame = 0

Query:   36 LVLLVCFFAQALSMGFYVSFGTMFVEIIEIFNTTETRAAWVGSIALSVCFVLGTFSSYVSKKYGHGLVISIGGAFLGLGLLLSSLVADVLSLTLTFSGVTSIGCSLLYFASLSCLPCYFKSNLCIMTSIVCSGSNFSGITFSPLMANLIKQYNLRICFQMFSITALIPIIGGLIIHKYSTQPSEKEXIGGLIIHKYSIQPSEKESEHSLLQNEEKEEGSPYSSLFNNRNYLLVLLSMSLIELCYFIPYIHLVNYGIHHGVSLLQASWLPVILSIGGWCGKIIFGIIGQNKYINITYLFQVFLLAMAVCLTLLPLATTFNQLTIFSVVYGVFDGGFTGFILPLVATTVPSKHVGIAVGTLYSSISIELLFGAPLAGFLYNATKSYAVPFILCGAILLTSAVIL------FCIHDNNSNKRNKGCHRTNNVEKKQTLEK 466
            +V+L  FF  AL  G   SFG  FVE +  F     R +W+ SI ++V        S +S K+G   V+  GG    LG+LL+S    +  L L+   ++  G +L +  +L+CL CYF     + T +  +G   S  TF+P    L+  Y  R    + S  +L  +  G ++   S   +E   +GG         P  +                  +SL ++  +L   ++++LI   YFIPY+HLV +        L A++L  +++I    G+++ G +G      +T L  ++     V L L P+A     L   +V YG   G        ++   + ++ +   +G L    SI  L G PL+G+L + T +Y   F++ GA LL+ + IL      FC     S  ++     T  ++ K  L K
Sbjct:   15 VVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPVGSALSTKFGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFAPTLACLSCYFSRRRSLATGLALTGVGLSSFTFAPFFQWLLSHYAWRGSLLLVSALSLHLVACGALLRPPSL--AEDPAVGG---------PRAQ-----------------LTSLLHHGPFLRYTVALTLINTGYFIPYLHLVAHLQDLDWDPLPAAFLLSVVAISDLVGRVVSGWLGDAVPGPVTRLLMLWTTLTGVSLALFPVAQAPTALVALAVAYGFTSGALAPLAFSVLPELIGTRRIYCGLGLLQMIESIGGLLGPPLSGYLRDVTGNYTASFVVAGAFLLSGSGILLTLPHFFCFSTTTSGPQDL---VTEALDTKVPLPK 420

The following BLAST results are available for this feature:

BLAST of TCONS_00015100-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015100-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MOT13	2.336e-37	26.54	Monocarboxylate transporter 13 OS=Homo sapiens GN=...	[more]

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TCONS_00015100-protein (polypeptide) - C. hemisphaerica