|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015100 ID=TCONS_00015100|Name=TCONS_00015100|organism=Clytia hemisphaerica|type=transcript|length=2246bp
atacatttctttgtttattGTTCTCATCAGCCAATCAGAACTTTGAGGTC
TATCTGACGGTCTGTAAGACCTTTCGATCgatagattttcattttttctt
ctcctCTCTCTTCTCTCTCTTTCTAATTTTCGAAGGACGAGCTATGAAGG
AATCTTGCTTCATGTCCAGAATTGGTTAACTAGTTTTCTGGTTAAAGTTT
CTCTTTCTGTCTAGCATACAATCTTACGAGCAGAAGATAGACCAAAAAGC
TAGGTGGCAGAATGGAAATGCAGGACCAATTAGCGGGACACCGTGACATA
GAATGCGGGTCACAAACAAAAACACGATTAGACAGAAGGAAAATGAAGAG
TTGGATGTTTTCTGTATtggttttgttagtttgtttCTTCGCACAAGCAT
TGAGCATGGGTTTTTACGTCAGCTTTGGAACCATGTTTGTGGAGATAATT
GAAATCTTTAACACAACAGAGACCAGAGCAGCTTGGGTTGGGTCGATTGC
GTTGAGTGTTTGTTTCGTattgggcaccttttcatcataTGTCTCCAAGA
AGTATGGCCATGGACTTGTAATCTCCATCGGAGGCGCTTTCCTTGGGCTT
GGTCTCTTACTCTCATCATTAGTAGCTGATGTTCTATCTCTGACACTCAC
ATTCAGTGGGGTAACCTCGATTGGATGCAGCTTGTTATACTTTGCCTCGC
TTTCATGTTTACCTTGCTACTTCAAATCCAATTTATGTATCATGACATCA
ATCGTTTGTTCAGGCAGTAATTTCAGCGGCATCACATTTTCACCTTTGAT
GGCCAACCTTATCAAACAATACAATCTCCGTATTTGCTTTCAAATGTTCT
CCATCACAGCGCTCATCCCCATCATCGGTGGGCTGATCATTCACAAGTAT
TCCACACAACCCTCTGAGAAGGAGANCATCGGTGGGCTGATCATTCACAA
GTATTCCATACAACCCTCTGAGAAGGAGAGCGAACATTCCCTTTTACAGA
ACGAAGAGAAGGAGGAAGGTTCTCCTTACAGCAGTTTATTCAATAATAGA
AATTATTTATTGGTCCTTTTGTCAATGTCATTGATCGAGCTTTGTTACTT
CATCCCATACATTCATTTGGTAAATTATGGTATTCACCATGGCGTATCGT
TACTTCAAGCCAGTTGGTTGCCCGTCATCCTTTCCATTGGTGGTTGGTGT
GGAAAGATCATCTTTGGCATCATTGGTCAAAACAAATACATCAACATCAC
TTATCTTTTCCAAGTCTTCCTACTAGCCATGGCTGTTTGTTTGACATTGT
TACCCCTAGCAACGACATTCAATCAGCTCACCATCTTTTCAGTAGTGTAT
GGTGTTTTCGATGGTGGCTTCACCGGCTTCATACTACCCTTAGTTGCGAC
GACTGTACCTTCTAAACATGTCGGCATTGCTGTGGGAACACTTTATTCAT
CTATCTCCATTGAATTACTTTTTGGAGCTCCACTGGCAGGGTTTCTGTAC
AACGCAACCAAATCGTACGCAGTACCTTTCATCCTCTGTGGTGccatttt
gctgacatcagcggTTATCCTTTTCTGTATCCATGACAACAATTCAAATA
AACGGAACAAAGGGTGTCACCGTACGAATAACGTTGAAAAGAAACAAACG
CTGGAAAAAGTGAAGAATTTTCtagaacatttcaaattaaatCTTCATCT
GGAACaattactgatttttttcaaactcgacaatTATGGTGAAACTTCTG
AAGAACATGAAGAACATAAAACTGTTTTACTGCCGATAGACCATCAACAA
AACCTAAAATCTTCATTAAGCAGACTACCTCTTGATTCTGATGAAGGTAC
CAAAGATACCAATAACAATTCTATAAACTCTGCTCTTCAACACGAAGGAG
AGCAGCTTTCACCAGAAAATGAACAGGCGACCGAGAAAAAACACTCCATT
GTCGAGTTTATTAATAATGAACCAATTTGCAGCCTGATACATAAGATGGA
TGGAGAAGAGACAAGCTCATTTCATCAATTACAAATTTTTATAAACAGTT
ATTTTTCAATCATAACGCACATGCTAGTGCCCACGAATTGGAGGTTGTCA
CAAAATTTGATGTCCGAAAACTCGACTCCCTGTTGATTGttcatttggat
tttgaaatatctttctATTATTTGTTTGTAGATATTGTAGatatagaatt
tttttaacttttatacaAAGTAAAACTAATATATTTAGGATTAGGT Run BLAST on NCBI protein sequence of TCONS_00015100-protein >TCONS_00015100-protein ID=TCONS_00015100-protein|Name=TCONS_00015100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=624bp
MEMQDQLAGHRDIECGSQTKTRLDRRKMKSWMFSVLVLLVCFFAQALSMG
FYVSFGTMFVEIIEIFNTTETRAAWVGSIALSVCFVLGTFSSYVSKKYGH
GLVISIGGAFLGLGLLLSSLVADVLSLTLTFSGVTSIGCSLLYFASLSCL
PCYFKSNLCIMTSIVCSGSNFSGITFSPLMANLIKQYNLRICFQMFSITA
LIPIIGGLIIHKYSTQPSEKEXIGGLIIHKYSIQPSEKESEHSLLQNEEK
EEGSPYSSLFNNRNYLLVLLSMSLIELCYFIPYIHLVNYGIHHGVSLLQA
SWLPVILSIGGWCGKIIFGIIGQNKYINITYLFQVFLLAMAVCLTLLPLA
TTFNQLTIFSVVYGVFDGGFTGFILPLVATTVPSKHVGIAVGTLYSSISI
ELLFGAPLAGFLYNATKSYAVPFILCGAILLTSAVILFCIHDNNSNKRNK
GCHRTNNVEKKQTLEKVKNFLEHFKLNLHLEQLLIFFKLDNYGETSEEHE
EHKTVLLPIDHQQNLKSSLSRLPLDSDEGTKDTNNNSINSALQHEGEQLS
PENEQATEKKHSIVEFINNEPICSLIHKMDGEETSSFHQLQIFINSYFSI
ITHMLVPTNWRLSQNLMSENSTPC Run BLAST on NCBI transcript from alignment at sc0000204:49562..53918+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015100 ID=TCONS_00015100|Name=TCONS_00015100|organism=Clytia hemisphaerica|type=transcript|length=4357bp|location=Sequence derived from alignment at sc0000204:49562..53918+ (Clytia hemisphaerica)
atacatttctttgtttattGTTCTCATCAGCCAATCAGAACTTTGAGGTC
TATCTGACGGTCTGTAAGACCTTTCGATCgatagattttcattttttctt
ctcctCTCTCTTCTCTCTCTTTCTAATTTTCGAAGGACGAGCTATGAAGG
AATCTTGCTTCATGTCCAGAATTGGTTAACTAGTTTTCTGGTTAAAGTTT
CTCTTTCTGTCTAGCATACAATCTTACGAGCAGAAGATAGACCAAAAAGC
TAGGTGGCAGAATGGAAATGCAGGACCAATTAGCGGGACACCGTGACATA
GAATGCGGGTCACAAACAAAAACACGATTAGACAGAAGGAAAATGAAGAG
TTGGATGTTTTCTGTATtggttttgttagtttgtttCTTCGCACAAGCAT
TGAGCATGGGTTTTTACGTCAGCTTTGGAACCATGTTTGTGGAGATAATT
GAAATCTTTAACACAACAGAGACCAGAGCAGGTGAGAAGTTTATGATCAT
TAAACTATCGGACATTTGACTTATTTCGGGACAATAAAATGAGTTTAATT
TCTTTAAATTATGCCTATAGATTCAAGGTATGAAGTTCTAGTTCAGGGAG
GACATTATCAAATAGTAAAATAAGGTTCTAGTCAACTTAACATGTCTAAT
TATCAGCACtttactaattttcaaacaGGCTctcttcaaaaacttttcac
tCGCGTTTGAAATTGAATTGCACTCCACTGGACTTTATAAGCTCGGAACA
ATAGATTTACGATCCCCATTGGGAcaataattgaaatttttatccccact
gtgggaaaaagctccaccggggctgtgagacaggggtgattgaaattttt
atccccactgtaggaaaaatttccaccggggctttgagacaggggtgaat
aGAGAGGAGAAGCTTTTCTCTCAGAACcgattttgattttgagggAAAAA
AGGGAGCCtgttttgataagcaaaaaatttatttgtccggttgtgtattt
ttttttcaaatataaatatCTTGTCAATTTCCAAAAGTCAAATGAACAGG
TGGTAAGTGACAAGGTAGGGAAAAGgacatcaatttttgatgatcctgca
aaaaatctttttcaaaaaagtaactCCTTCTATTAAATACAACTGGGAAA
TTTAGCAAACAcgtcacaaaaatattttgcaaaagtaTCTAGTTTTCTAT
AGAAATCTGCAAAAATATCGTTAGgtttctaaaaatagcaactCAAGTTT
ATTTTGTGATCATTCTGACGTCATAAGTGTCACTTCTTTTGCAGCTCTAA
AAAATCTAAGAAATTATTAATAGTCTTGCAATATTTTctctaaataaaat
taaaattatataactataatttcaaaacttcaaaacaatCTCGTCTCGTC
CTAGAATACTACAATAGTTTTGACCGATCAAAATCTTTATTTCAGCTTGG
GTTGGGTCGATTGCGTTGAGTGTTTGTTTCGTattgggcaccttttcatc
ataTGTCTCCAAGAAGTATGGCCATGGACTTGTAATCTCCATCGGAGGCG
CTTTCCTTGGGCTTGGTCTCTTACTCTCATCATTAGTAGCTGATGTTCTA
TCTCTGACACTCACATTCAGTGGGGTAACCTCGATTGGATGCAGCTTGTT
ATACTTTGCCTCGCTTTCATGTTTACCTTGCTACTTCAAATCCAATTTAT
GTATCATGACATCAATCGTTTGTTCAGGCAGTAATTTCAGCGGCATCACA
TTTTCACCTTTGATGGCCAACCTTATCAAACAATACAATCTCCGTATTTG
CTTTCAAATGTTCTCCATCACAGCGCTCATCCCCATCATCGGTGGGCTGA
TCATTCACAAGTATTCCACACAACCCTCTGAGAAGGAGANCATCGGTGGG
CTGATCATTCACAAGTATTCCATACAACCCTCTGAGAAGGAGAGCGAACA
TTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTTACAGCAGTT
TATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATGTCATTGATC
GAGCTTTGTTACTTCATCCCATACATTCATTTGGTAAGTCCAaatctttt
ttgactttttggaaaaattataaTAGCAGCATTTTTTTTCACCATTCAAC
ACAGTCTTTTTTGACTTGATATTGATTCTAGCTCCCTAGTCGACACAGAT
CGTCGAAACAACATAACATCTAAATAATGCTCTGCTATAGTCATTAAATG
CACATTGATAAATCTCCTTTAAAAATTTCCCAGCTGGTACAAAACGTAGC
TTGTACCACCTTACCCACGGGCGTttcttatattttgaaaaaagttgcaG
TGTGTCGGTCTGTTTTGGTTAGCGAGATTCTGTGTCTCAGTCTCAAAATC
CTAAAAAACACAAGCATAGGGGTGctcttttgaaaattgaaagataCCAT
TGCGATAAAAGTAACGTCACTTTAGTTGAGCTAGATTGAATGCTAGAAAT
AGCTATCCTCCACCACAGAGACATACAGTTTTGTGGAAAAAATGGTGAAA
CACGGAATGTTGCCTAACCGTAATAAACCGAACTTTGCGTTATCCTTTCA
GTTAGCAAAGAAGAGTTTCATAACGTCAATATCacattaaatgaacgttg
aaacaacttaTATAcgtataccgtattacttcgaataaacgcccggggcg
tttattaaattttttcgattttaggagaggcgtttattcgaaggagggcg
tttaaaagaagtaaTACGGCAATCCTTTCTACAGCAAGTCATTAAGGAGA
TTCCCCATAAAAATCTAATCGACAAAACATTTCATACACATTCAGGTAAA
TTATGGTATTCACCATGGCGTATCGTTACTTCAAGCCAGTTGGTTGCCCG
TCATCCTTTCCATTGGTGGTTGGTGTGGAAAGATCATCTTTGGCATCATT
GGTCAAAACAAATACATCAACATCACTTATCTTTTCCAAGTCTTCCTACT
AGCCATGGCTGTTTGTTTGACATTGTTACCCCTAGCAACGACATTCAATC
AGCTCACCATCTTTTCAGTAGTGTATGGTGTTTTCGATGGTGGCTTCACC
GGCTTCATACTACCCTTAGTTGCGACGACTGTACCTTCTAAACATGTCGG
CATTGCTGTGGGAACACTTTATTCATCTATCTCCATTGAATTACTTTTTG
GAGCTCCACTGGCAGGTAAGCATGAACTTTCTGtcttctacacgtttttt
tttttaagaaactagttttaccaagcagcctcaatgtttcttaagaaatc
ggcctttgaGCCTTAANTTTCTTAGTTTTTaagcattctgagcctcgtgt
ttcttaaaagtgtgtttctaaaaaaaaaaaaaagtgtattagcGGGTATA
ACTGCGCTTTCTGCGACGGGAACGAATAGCTCCTGATGTGTCTAGACACG
TAAACTCGCTATTACATCCAAGAATGACCTCACAGCCTCCTCCTCGAAGC
CTTCACCACAGTAACAAGTGATTCCAGGGGTTCTAGATTGACTACCATTT
GATTTCATAGAAATCGTGTTTGAAATATCgcttttcattgaatttttcag
GGTTTCTGTACAACGCAACCAAATCGTACGCAGTACCTTTCATCCTCTGT
GGTGccattttgctgacatcagcggTTATCCTTTTCTGTATCCATGACAA
CAATTCAAATAAACGGAACAAAGGGTGTCACCGTACGAATAACGTTGAAA
AGAAACAAACGCTGGAAAAAGTGAAGAATTTTCtagaacatttcaaatta
aatCTTCATCTGGAACaattactgatttttttcaaactcgacaatTATGG
TGAAACTTCTGAAGAACATGAAGAACATAAAACTGTTTTACTGCCGATAG
ACCATCAACAAAACCTAAAATCTTCATTAAGCAGACTACCTCTTGATTCT
GATGAAGGTACCAAAGATACCAATAACAATTCTATAAACTCTGCTCTTCA
ACACGAAGGAGAGCAGCTTTCACCAGAAAATGAACAGGCGACCGAGAAAA
AACACTCCATTGTCGAGTTTATTAATAATGAACCAATTTGCAGCCTGATA
CATAAGATGGATGGAGAAGAGACAAGCTCATTTCATCAATTACAAATTTT
TATAAACAGTTATTTTTCAATCATAACGCACATGCTAGTGCCCACGAATT
GGAGGTTGTCACAAAATTTGATGTCCGAAAACTCGACTCCCTGTTGATTG
ttcatttggattttgaaatatctttctATTATTTGTTTGTAGATATTGTA
GatatagaatttttttaacttttatacaAAGTAAAACTAATATATTTAGG
ATTAGGT Coding sequence (CDS) from alignment at sc0000204:49562..53918+ >TCONS_00015100 ID=TCONS_00015100|Name=TCONS_00015100|organism=Clytia hemisphaerica|type=CDS|length=7500bp|location=Sequence derived from alignment at sc0000204:49562..53918+ (Clytia hemisphaerica)
ATGGAAATGCAGGACCAATTAGCGGGACACCGTGACATAGAATGCGGGTC
ACAAACAAAAACACGATTAGACAGAAGGAAAATGAAGAGTTGGATGTTTT
CTGTATtggttttgttagtttgtttCTTCGCACAAGCATTGAGCATGGGT
TTTTACGTCAGCTTTGGAACCATGTTTGTGGAGATAATTGAAATCTTTAA
CACAACAGAGACCAGAGCAGCTTGGGTTGGGTCGATTGCGTTGAGTGTTT
GTTTCGTattgggcaccttttcatcataTGTCTCCAAGAAGTATGGCCAT
GGACTTGTAATCTCCATCGGAGGCGCTTTCCTTGGGCTTGGTCTCTTACT
CTCATCATTAGTAGCTGATGTTCTATCTCTGACACTCACATTCAGTGGGG
TAACCTCGATTGGATGCAGCTTGTTATACTTTGCCTCGCTTTCATGTTTA
CCTTGCTACTTCAAATCCAATTTATGTATCATGACATCAATCGTTTGTTC
AGGCAGTAATTTCAGCGGCATCACATTTTCACCTTTGATGGCCAACCTTA
TCAAACAATACAATCTCCGTATTTGCTTTCAAATGTTCTCCATCACAGCG
CTCATCCCCATCATCGGTGGGCTGATCATTCACAAGTATTCCACACAACC
CTCTGAGAAGGAGANCATCGGTGGGCTGATCATTCACAAGTATTCCATAC
AACCCTCTGAGAAGGAGAGCGAACATTCCCTTTTACAGAACGAAGAGAAG
GAGGAAGGTTCTCCTTACAGCAGTTTATTCAATAATAGAAATTATTTATT
GGTCCTTTTGTCAATGTCATTGATCGAGCTTTGTTACTTCATCCCATACA
TTCATTTGGTAAATTATGGTATTCACCATGGCGTATCGTTACTTCAAGCC
AGTTGGTTGCCCGTCATCCTTTCCATTGGTGGTTGGTGTGGAAAGATCAT
CTTTGGCATCATTGGTCAAAACAAATACATCAACATCACTTATCTTTTCC
AAGTCTTCCTACTAGCCATGGCTGTTTGTTTGACATTGTTACCCCTAGCA
ACGACATTCAATCAGCTCACCATCTTTTCAGTAGTGTATGGTGTTTTCGA
TGGTGGCTTCACCGGCTTCATACTACCCTTAGTTGCGACGACTGTACCTT
CTAAACATGTCGGCATTGCTGTGGGAACACTTTATTCATCTATCTCCATT
GAATTACTTTTTGGAGCTCCACTGGCAGGGTTTCTGTACAACGCAACCAA
ATCGTACGCAGTACCTTTCATCCTCTGTGGTGccattttgctgacatcag
cggTTATCCTTTTCTGTATCCATGACAACAATTCAAATAAACGGAACAAA
GGGTGTCACCGTACGAATAACGTTGAAAAGAAACAAACGCTGGAAAAAGT
GAAGAATTTTCtagaacatttcaaattaaatCTTCATCTGGAACaattac
tgatttttttcaaactcgacaatTATGGTGAAACTTCTGAAGAACATGAA
GAACATAAAACTGTTTTACTGCCGATAGACCATCAACAAAACCTAAAATC
TTCATTAAGCAGACTACCTCTTGATTCTGATGAAGGTACCAAAGATACCA
ATAACAATTCTATAAACTCTGCTCTTCAACACGAAGGAGAGCAGCTTTCA
CCAGAAAATGAACAGGCGACCGAGAAAAAACACTCCATTGTCGAGTTTAT
TAATAATGAACCAATTTGCAGCCTGATACATAAGATGGATGGAGAAGAGA
CAAGCTCATTTCATCAATTACAAATTTTTATAAACAGTTATTTTTCAATC
ATAACGCACATGCTAGTGCCCACGAATTGGAGGTTGTCACAAAATTTGAT
GTCCGAAAACTCGACTCCCTGTTGAATGGAAATGCAGGACCAATTAGCGG
GACACCGTGACATAGAATGCGGGTCACAAACAAAAACACGATTAGACAGA
AGGAAAATGAAGAGTTGGATGTTTTCTGTATtggttttgttagtttgttt
CTTCGCACAAGCATTGAGCATGGGTTTTTACGTCAGCTTTGGAACCATGT
TTGTGGAGATAATTGAAATCTTTAACACAACAGAGACCAGAGCAGCTTGG
GTTGGGTCGATTGCGTTGAGTGTTTGTTTCGTattgggcaccttttcatc
ataTGTCTCCAAGAAGTATGGCCATGGACTTGTAATCTCCATCGGAGGCG
CTTTCCTTGGGCTTGGTCTCTTACTCTCATCATTAGTAGCTGATGTTCTA
TCTCTGACACTCACATTCAGTGGGGTAACCTCGATTGGATGCAGCTTGTT
ATACTTTGCCTCGCTTTCATGTTTACCTTGCTACTTCAAATCCAATTTAT
GTATCATGACATCAATCGTTTGTTCAGGCAGTAATTTCAGCGGCATCACA
TTTTCACCTTTGATGGCCAACCTTATCAAACAATACAATCTCCGTATTTG
CTTTCAAATGTTCTCCATCACAGCGCTCATCCCCATCATCGGTGGGCTGA
TCATTCACAAGTATTCCACACAACCCTCTGAGAAGGAGANCATCGGTGGG
CTGATCATTCACAAGTATTCCATACAACCCTCTGAGAAGGAGAGCGAACA
TTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTTACAGCAGTT
TATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATGTCATTGATC
GAGCTTTGTTACTTCATCCCATACATTCATTTGGTAAATTATGGTATTCA
CCATGGCGTATCGTTACTTCAAGCCAGTTGGTTGCCCGTCATCCTTTCCA
TTGGTGGTTGGTGTGGAAAGATCATCTTTGGCATCATTGGTCAAAACAAA
TACATCAACATCACTTATCTTTTCCAAGTCTTCCTACTAGCCATGGCTGT
TTGTTTGACATTGTTACCCCTAGCAACGACATTCAATCAGCTCACCATCT
TTTCAGTAGTGTATGGTGTTTTCGATGGTGGCTTCACCGGCTTCATACTA
CCCTTAGTTGCGACGACTGTACCTTCTAAACATGTCGGCATTGCTGTGGG
AACACTTTATTCATCTATCTCCATTGAATTACTTTTTGGAGCTCCACTGG
CAGGGTTTCTGTACAACGCAACCAAATCGTACGCAGTACCTTTCATCCTC
TGTGGTGccattttgctgacatcagcggTTATCCTTTTCTGTATCCATGA
CAACAATTCAAATAAACGGAACAAAGGGTGTCACCGTACGAATAACGTTG
AAAAGAAACAAACGCTGGAAAAAGTGAAGAATTTTCtagaacatttcaaa
ttaaatCTTCATCTGGAACaattactgatttttttcaaactcgacaatTA
TGGTGAAACTTCTGAAGAACATGAAGAACATAAAACTGTTTTACTGCCGA
TAGACCATCAACAAAACCTAAAATCTTCATTAAGCAGACTACCTCTTGAT
TCTGATGAAGGTACCAAAGATACCAATAACAATTCTATAAACTCTGCTCT
TCAACACGAAGGAGAGCAGCTTTCACCAGAAAATGAACAGGCGACCGAGA
AAAAACACTCCATTGTCGAGTTTATTAATAATGAACCAATTTGCAGCCTG
ATACATAAGATGGATGGAGAAGAGACAAGCTCATTTCATCAATTACAAAT
TTTTATAAACAGTTATTTTTCAATCATAACGCACATGCTAGTGCCCACGA
ATTGGAGGTTGTCACAAAATTTGATGTCCGAAAACTCGACTCCCTGTTGA
ATGGAAATGCAGGACCAATTAGCGGGACACCGTGACATAGAATGCGGGTC
ACAAACAAAAACACGATTAGACAGAAGGAAAATGAAGAGTTGGATGTTTT
CTGTATtggttttgttagtttgtttCTTCGCACAAGCATTGAGCATGGGT
TTTTACGTCAGCTTTGGAACCATGTTTGTGGAGATAATTGAAATCTTTAA
CACAACAGAGACCAGAGCAGCTTGGGTTGGGTCGATTGCGTTGAGTGTTT
GTTTCGTattgggcaccttttcatcataTGTCTCCAAGAAGTATGGCCAT
GGACTTGTAATCTCCATCGGAGGCGCTTTCCTTGGGCTTGGTCTCTTACT
CTCATCATTAGTAGCTGATGTTCTATCTCTGACACTCACATTCAGTGGGG
TAACCTCGATTGGATGCAGCTTGTTATACTTTGCCTCGCTTTCATGTTTA
CCTTGCTACTTCAAATCCAATTTATGTATCATGACATCAATCGTTTGTTC
AGGCAGTAATTTCAGCGGCATCACATTTTCACCTTTGATGGCCAACCTTA
TCAAACAATACAATCTCCGTATTTGCTTTCAAATGTTCTCCATCACAGCG
CTCATCCCCATCATCGGTGGGCTGATCATTCACAAGTATTCCACACAACC
CTCTGAGAAGGAGANCATCGGTGGGCTGATCATTCACAAGTATTCCATAC
AACCCTCTGAGAAGGAGAGCGAACATTCCCTTTTACAGAACGAAGAGAAG
GAGGAAGGTTCTCCTTACAGCAGTTTATTCAATAATAGAAATTATTTATT
GGTCCTTTTGTCAATGTCATTGATCGAGCTTTGTTACTTCATCCCATACA
TTCATTTGGTAAATTATGGTATTCACCATGGCGTATCGTTACTTCAAGCC
AGTTGGTTGCCCGTCATCCTTTCCATTGGTGGTTGGTGTGGAAAGATCAT
CTTTGGCATCATTGGTCAAAACAAATACATCAACATCACTTATCTTTTCC
AAGTCTTCCTACTAGCCATGGCTGTTTGTTTGACATTGTTACCCCTAGCA
ACGACATTCAATCAGCTCACCATCTTTTCAGTAGTGTATGGTGTTTTCGA
TGGTGGCTTCACCGGCTTCATACTACCCTTAGTTGCGACGACTGTACCTT
CTAAACATGTCGGCATTGCTGTGGGAACACTTTATTCATCTATCTCCATT
GAATTACTTTTTGGAGCTCCACTGGCAGGGTTTCTGTACAACGCAACCAA
ATCGTACGCAGTACCTTTCATCCTCTGTGGTGccattttgctgacatcag
cggTTATCCTTTTCTGTATCCATGACAACAATTCAAATAAACGGAACAAA
GGGTGTCACCGTACGAATAACGTTGAAAAGAAACAAACGCTGGAAAAAGT
GAAGAATTTTCtagaacatttcaaattaaatCTTCATCTGGAACaattac
tgatttttttcaaactcgacaatTATGGTGAAACTTCTGAAGAACATGAA
GAACATAAAACTGTTTTACTGCCGATAGACCATCAACAAAACCTAAAATC
TTCATTAAGCAGACTACCTCTTGATTCTGATGAAGGTACCAAAGATACCA
ATAACAATTCTATAAACTCTGCTCTTCAACACGAAGGAGAGCAGCTTTCA
CCAGAAAATGAACAGGCGACCGAGAAAAAACACTCCATTGTCGAGTTTAT
TAATAATGAACCAATTTGCAGCCTGATACATAAGATGGATGGAGAAGAGA
CAAGCTCATTTCATCAATTACAAATTTTTATAAACAGTTATTTTTCAATC
ATAACGCACATGCTAGTGCCCACGAATTGGAGGTTGTCACAAAATTTGAT
GTCCGAAAACTCGACTCCCTGTTGAATGGAAATGCAGGACCAATTAGCGG
GACACCGTGACATAGAATGCGGGTCACAAACAAAAACACGATTAGACAGA
AGGAAAATGAAGAGTTGGATGTTTTCTGTATtggttttgttagtttgttt
CTTCGCACAAGCATTGAGCATGGGTTTTTACGTCAGCTTTGGAACCATGT
TTGTGGAGATAATTGAAATCTTTAACACAACAGAGACCAGAGCAGCTTGG
GTTGGGTCGATTGCGTTGAGTGTTTGTTTCGTattgggcaccttttcatc
ataTGTCTCCAAGAAGTATGGCCATGGACTTGTAATCTCCATCGGAGGCG
CTTTCCTTGGGCTTGGTCTCTTACTCTCATCATTAGTAGCTGATGTTCTA
TCTCTGACACTCACATTCAGTGGGGTAACCTCGATTGGATGCAGCTTGTT
ATACTTTGCCTCGCTTTCATGTTTACCTTGCTACTTCAAATCCAATTTAT
GTATCATGACATCAATCGTTTGTTCAGGCAGTAATTTCAGCGGCATCACA
TTTTCACCTTTGATGGCCAACCTTATCAAACAATACAATCTCCGTATTTG
CTTTCAAATGTTCTCCATCACAGCGCTCATCCCCATCATCGGTGGGCTGA
TCATTCACAAGTATTCCACACAACCCTCTGAGAAGGAGANCATCGGTGGG
CTGATCATTCACAAGTATTCCATACAACCCTCTGAGAAGGAGAGCGAACA
TTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTTACAGCAGTT
TATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATGTCATTGATC
GAGCTTTGTTACTTCATCCCATACATTCATTTGGTAAATTATGGTATTCA
CCATGGCGTATCGTTACTTCAAGCCAGTTGGTTGCCCGTCATCCTTTCCA
TTGGTGGTTGGTGTGGAAAGATCATCTTTGGCATCATTGGTCAAAACAAA
TACATCAACATCACTTATCTTTTCCAAGTCTTCCTACTAGCCATGGCTGT
TTGTTTGACATTGTTACCCCTAGCAACGACATTCAATCAGCTCACCATCT
TTTCAGTAGTGTATGGTGTTTTCGATGGTGGCTTCACCGGCTTCATACTA
CCCTTAGTTGCGACGACTGTACCTTCTAAACATGTCGGCATTGCTGTGGG
AACACTTTATTCATCTATCTCCATTGAATTACTTTTTGGAGCTCCACTGG
CAGGGTTTCTGTACAACGCAACCAAATCGTACGCAGTACCTTTCATCCTC
TGTGGTGccattttgctgacatcagcggTTATCCTTTTCTGTATCCATGA
CAACAATTCAAATAAACGGAACAAAGGGTGTCACCGTACGAATAACGTTG
AAAAGAAACAAACGCTGGAAAAAGTGAAGAATTTTCtagaacatttcaaa
ttaaatCTTCATCTGGAACaattactgatttttttcaaactcgacaatTA
TGGTGAAACTTCTGAAGAACATGAAGAACATAAAACTGTTTTACTGCCGA
TAGACCATCAACAAAACCTAAAATCTTCATTAAGCAGACTACCTCTTGAT
TCTGATGAAGGTACCAAAGATACCAATAACAATTCTATAAACTCTGCTCT
TCAACACGAAGGAGAGCAGCTTTCACCAGAAAATGAACAGGCGACCGAGA
AAAAACACTCCATTGTCGAGTTTATTAATAATGAACCAATTTGCAGCCTG
ATACATAAGATGGATGGAGAAGAGACAAGCTCATTTCATCAATTACAAAT
TTTTATAAACAGTTATTTTTCAATCATAACGCACATGCTAGTGCCCACGA
ATTGGAGGTTGTCACAAAATTTGATGTCCGAAAACTCGACTCCCTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015100-exon-sc0000204-1491911889:49562..50042 | TCONS_00015100-exon-sc0000204-1491911889:49562..50042 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1510915933:49562..50042 | TCONS_00015100-exon-sc0000204-1510915933:49562..50042 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1575043694:49562..50042 | TCONS_00015100-exon-sc0000204-1575043694:49562..50042 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1491911889:51007..51644 | TCONS_00015100-exon-sc0000204-1491911889:51007..51644 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1510915933:51007..51644 | TCONS_00015100-exon-sc0000204-1510915933:51007..51644 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1575043694:51007..51644 | TCONS_00015100-exon-sc0000204-1575043694:51007..51644 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1491911889:52407..52776 | TCONS_00015100-exon-sc0000204-1491911889:52407..52776 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1510915933:52407..52776 | TCONS_00015100-exon-sc0000204-1510915933:52407..52776 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1575043694:52407..52776 | TCONS_00015100-exon-sc0000204-1575043694:52407..52776 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1491911889:53162..53918 | TCONS_00015100-exon-sc0000204-1491911889:53162..53918 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1510915933:53162..53918 | TCONS_00015100-exon-sc0000204-1510915933:53162..53918 | Clytia hemisphaerica | exon |
| TCONS_00015100-exon-sc0000204-1575043694:53162..53918 | TCONS_00015100-exon-sc0000204-1575043694:53162..53918 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000204 | supercontig | sc0000204:49562..53918 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
BLAST of TCONS_00015100 vs. Swiss-Prot (Human)
Match: MOT10 (Monocarboxylate transporter 10 OS=Homo sapiens GN=SLC16A10 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.422e-19 Identity = 108/447 (24.16%), Postives = 191/447 (42.73%), Query Frame = 1
Query: 367 LVLLVCFFAQALSMGFYVSFGTMFVEIIEIFNTTET-----RAAWVGSIALSVCFVLGTFSSYVSKKYGHGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXFSGVTSIGCSLLYFASLSCLPCYFKSNLCIMTSIVCSGSNFSGITFSPLMANLIKQYNLRICFQMFSITALIPIIGGLIIHKYSTQPSEKEXIGGL--IIHKYSIQPSEKESEHSLLQNEEKEEGSPYSSLFNNRNYXXXXXXXXXXXXCYFIPYIHLVNYGIHHGVSLLQASWLPVILSIGGWCGKIIFGIIG------QNKYINITYLFQVFLLAMAVCLTLLPLATTFNQLTIFSVVYGVFDGGFTGFILPLVATTVPSKHVGIAVGTLYSSISIELLFGAPLAGFLYNATKSYAVPFILCGAILLTSAVILFCIHDNNSNKRNKGCHRTNNVEKKQTLEKVKN 1668
LV+L + G + G +FV ++E F + + + AWVGS+++ + F S + +G +G A +GL+ SS V+ + L LT+ + + GCS Y SL L YFK L ++ IV +GS+ I L+ LI L ++ I + + G +T +KE G + + P +K ++ F Y + + + L YF+PY+HL+ + + + + + G+++FG I + Y+ + F + L++M ++PL + F L ++ G+FDG F + P+ V ++ V A+G L +SI + G P+AG L + SY V F L G L +L C +K+ + +T EK + + + +N
Sbjct: 72 LVMLAAMWCNGSVFGIQNACGVLFVSMLETFGSKDDDKMVFKTAWVGSLSMGMIFFCCPIVSVFTDLFGCRKTAVVGAAVGFVGLMSSSFVSSIEPLYLTYGIIFACGCSFAYQPSLVILGHYFKKRLGLVNGIVTAGSSVFTILLPLLLRVLIDSVGLFYTLRVLCIFMFVLFLAGFTYRPLATSTKDKESGGSGSSLFSRKKFSPPKKIFNFAI---------------FKVTAYAVWAVGIPLALFGYFVPYVHLMKHVNERFQDEKNKEVVLMCIGVTSGVGRLLFGRIADYVPGVKKVYLQVLSFFFIGLMSM-----MIPLCSIFGALIAVCLIMGLFDGCFISIMAPIAFELVGAQDVSQAIGFLLGFMSIPMTVGPPIAGLLRDKLGSYDVAFYLAGVPPLIGGAVL-CFIPWIHSKKQREISKTTGKEKMEKMLENQN 497
The following BLAST results are available for this feature:
|
