TCONS_00014288-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014288-protein
Unique NameTCONS_00014288-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length389

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014288-protein ID=TCONS_00014288-protein|Name=TCONS_00014288-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MLEFQIILPTGQSINIILKSKESTGKHLKESVFKSVNILLDDKEYFGLKY
SDRNDDTPSWITDTDNLKSMSFLKADSKHPSMQLSVRMYPPNPDFAMSTP
ESRNLFRCHMKNLLVSNNLGCDSRTHAMLDGFVAQYELGDYHEETMKAEY
GKKMNKINIYAPSILSAGTPIGEAEYIQLVRSYHRKLSGVRPAQADILYL
GMVQKLPLYGYKVYNISDKINKNYHMAISAQGIHFFFESILETFTIPKHR
EAYPWACLVFAEQERNKVKLGFFNDKGAFSERYVKVSGKFSNRSGAKLVQ
DVELHKANFLDKIDGTQSIVYDSRKKAQRVHSTKIPRRNSAFNRTVNTLG
RSIRSSLRINKKKRISSEADADSGTVDEFELSSSEVHAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007992XLOC_007992Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014288TCONS_00014288Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019749Band_41_domain
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR019748FERM_central
IPR000299FERM_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 38..50
score: 41.99
coord: 108..121
score: 18.6
coord: 121..141
score: 35.12
coord: 194..210
score: 37.25
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 1..214
e-value: 2.8E-4
score: 29.0
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 89..206
e-value: 1.1E-11
score: 44.6
NoneNo IPR availableGENE3D3.10.20.90coord: 2..88
e-value: 1.8E-7
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..389
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 99..214
e-value: 1.1E-6
score: 28.9
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 102..206
e-value: 1.18054E-8
score: 50.7078
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 98..209
IPR000299FERM domainPROSITEPS50057FERM_3coord: 2..314
score: 34.955

Blast
[Close]
BLAST of TCONS_00014288-protein vs. Swiss-Prot (Human)
Match: FARP2 (FERM, RhoGEF and pleckstrin domain-containing protein 2 OS=Homo sapiens GN=FARP2 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.172e-16
Identity = 64/245 (26.12%), Postives = 117/245 (47.76%), Query Frame = 0 
Query:    5 QIILPTGQSINIILKSK-------------ESTGKHLKESVFKSVNILLDDKEYFGLKYSDRNDDTPSWITDTDNLKSMSFLKADSKHPSMQLSVRMYPPNPDFAMSTPESRNLFRCHMKNLLVSNNLGCDSRTHAMLDGFVAQYELGDYHEETMKAEYGKKMNKINIYAPSILSAGTPIGEAEYIQLVRSYHRKLSGVRPAQADILYLGMVQKLPLYGYKVYNISDKINKNYHMAISAQGIHFF 236
            Q +LP  Q  ++ L+ K             +  G+ L   V+K +N++  D  YFG+++     +T S+    + +K +       K+  ++L+V+ +PP+P   +    +R LF   +K  L+   L C   T A+L   + Q E+GDY +ET+  E+     K+N Y P         G+   ++ +  +H+K  G  PA++D   L + +KL +YG + +  SD+      +A+S  G+  F
Sbjct:   33 QTLLPRMQEKHLHLRVKLLDNTMEIFDIEPKCDGQVLLTQVWKRLNLVECD--YFGMEF----QNTQSYWIWLEPMKPIIRQIRRPKNVVLRLAVKFFPPDPG-QLQEEYTRYLFALQLKRDLLEERLTCADTTAALLTSHLLQSEIGDY-DETLDREH----LKVNEYLP---------GQQHCLEKILEFHQKHVGQTPAESDFQVLEIARKLEMYGIRFHMASDREGTKIQLAVSHMGVLVF 256
The following BLAST results are available for this feature:
BLAST of TCONS_00014288-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FARP21.172e-1626.12FERM, RhoGEF and pleckstrin domain-containing prot... [more]
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