TCONS_00013961-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013961-protein
Unique Name	TCONS_00013961-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	917

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013961-protein ID=TCONS_00013961-protein|Name=TCONS_00013961-protein|organism=Clytia hemisphaerica|type=polypeptide|length=917bp
MASSGGLGRGGRGALLLKALETPVKTPGHSSQNGQTTSPPAPSGVKPPST
ADTQTSKAPAQKTGPVMMGRGLLAQQLLQKKAKSPTPTPPPPDEKPPSEP
QRTKSVSPPPVPSAGLPTPSTASEQKAPSTVGTSTTSEDSTLLSELERLT
VEAPKLTKRMDKGSAGIPSPMFVNYISFKAREEGAFQYNVSFNPPVESRN
MRFGMLKEHAELIGKTKAFDGATLFIPHRLPKPQMKLQSKRITDGATVEL
KITLVKILAPTECLQLYNIVLRRVMKVLEMSQVGRYYYDPKRPAPIPQHR
LELWPGYITSIQAYEGGVMLLADVSHRLLRTDTVLTFMYDIIQKNPNNFQ
AEVTKQLVGNVVLTRYNNKTYRIDDIAWDKSPESKFQYFNGEEMSYIEYY
RKSYNKELTDTGQPLLIHRPKETKGVRQRGKPLEIICLIPELCSMTGLTD
AIRADFRVMKDIAQHTRVTPNQRKIAMKKFIDNIYKTPTALEELQSWNLE
LDKDLLSTEGRELPNEKIVFGSKTIVANDQADWGREATRERVISAVGINQ
WLVLFTKRDQQKAMDFVQTMKQCCPQMGIQCNDPHTFCLRDDRTESYLRS
IRENLNPQIQMVVCIFPTSRDDRYAAVKKLCCVDSPVPSQCINARTISQA
NKLRSVTQKVALQINVKLGGELWALNIPMKNVMIIGIDVYHDSSKGSRSI
GGFVASTNKTFTRWYSRCCFQMPGQELIDGLKVCFTSALKKYHDDNHCLP
EKIIVFRDGVGDGQMQVVANYEVQQLRECFPLLGASYEPKLCVVVVQKRI
SQRLFSAKNNQLENPKPGSVLDHTITRREWFDFFLVSQHVRQGTVTPTHY
VVVHDDTGMMPDHIQRLSYKLTHLYYNWPGTIRVPAPCQYAHKLAFLVGQ
SLHKDPSQELSDRLFFL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007811	XLOC_007811	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013961	TCONS_00013961	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003165	Piwi
IPR003100	PAZ_dom
IPR012337	RNaseH-like_dom
IPR014811	ArgoL1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003165	Piwi domain	SMART	SM00950	Piwi_a_2	coord: 611..903 e-value: 7.0E-130 score: 447.5
IPR003165	Piwi domain	PFAM	PF02171	Piwi	coord: 611..903 e-value: 1.7E-98 score: 329.5
IPR003165	Piwi domain	PROSITE	PS50822	PIWI	coord: 611..903 score: 50.038
IPR003100	PAZ domain	SMART	SM00949	PAZ_2_a_3	coord: 332..471 e-value: 1.5E-61 score: 220.5
IPR003100	PAZ domain	PFAM	PF02170	PAZ	coord: 336..468 e-value: 1.1E-32 score: 112.6
IPR003100	PAZ domain	PROSITE	PS50821	PAZ	coord: 353..440 score: 20.659
IPR003100	PAZ domain	SUPERFAMILY	101690	PAZ domain	coord: 184..487
None	No IPR available	GENE3D	3.40.50.2300		coord: 518..676 e-value: 1.9E-39 score: 134.6
None	No IPR available	GENE3D	2.170.260.10		coord: 331..455 e-value: 1.9E-31 score: 107.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..145
None	No IPR available	CDD	cd04658	Piwi_piwi-like_Euk	coord: 457..900 e-value: 0.0 score: 631.608
None	No IPR available	CDD	cd02845	PAZ_piwi_like	coord: 331..449 e-value: 7.26931E-51 score: 173.985
IPR012337	Ribonuclease H-like domain	GENE3D	3.30.420.10		coord: 677..917 e-value: 6.4E-93 score: 310.0
IPR012337	Ribonuclease H-like domain	SUPERFAMILY	53098	Ribonuclease H-like	coord: 465..917
IPR014811	Argonaute, linker 1 domain	PFAM	PF08699	ArgoL1	coord: 282..326 e-value: 1.3E-4 score: 21.4

Blast

[Close]

BLAST of TCONS_00013961-protein vs. Swiss-Prot (Human)
Match: PIWL1 (Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1 SV=1)

HSP 1 Score: 802.742 bits (2072), Expect = 0.000e+0
Identity = 391/838 (46.66%), Postives = 552/838 (65.87%), Query Frame = 0

Query:   85 PTPTPPPPDEKPPSEPQRTKSVSPPPVPSAGLPTPSTASEQKAPSTVGTSTTSEDSTLLSELERLTVEAPKLTKRMDKGSAGIPSPMFVNYISFKAREEGA-FQYNVSFNPPVESRNMRFGMLKEHAELIGKTKAFDGATLFIPHRLPKPQMKLQSKRITDGATVELKITLVKILAPTE--CLQLYNIVLRRVMKVLEMSQVGRYYYDPKRPAPIPQHRLELWPGYITSIQAYEGGVMLLADVSHRLLRTDTVLTFMYDII-QKNPNNFQAEVTKQLVGNVVLTRYNNKTYRIDDIAWDKSPESKFQYFNGEEMSYIEYYRKSYNKELTDTGQPLLIHRPKETKGVRQRGKPLEIICLIPELCSMTGLTDAIRADFRVMKDIAQHTRVTPNQRKIAMKKFIDNIYKTPTALEELQSWNLELDKDLLSTEGRELPNEKIVFGSKTIVANDQ-ADWGREATRERVISAVGINQWLVLFTKRDQQKAMDFVQTMKQCCPQMGIQCNDPHTFCLRDDRTESYLRSIRENLNPQIQMVVCIFPTSRDDRYAAVKKLCCVDSPVPSQCINARTISQANKLRSVTQKVALQINVKLGGELWALNIPMKNVMIIGIDVYHDSSKGSRSIGGFVASTNKTFTRWYSRCCFQMPGQELIDGLKVCFTSALKKYHDDNHCLPEKIIVFRDGVGDGQMQVVANYEVQQLRECFPLLGASYEPKLCVVVVQKRISQRLFSAKNNQLENPKPGSVLDHTITRREWFDFFLVSQHVRQGTVTPTHYVVVHDDTGMMPDHIQRLSYKLTHLYYNWPGTIRVPAPCQYAHKLAFLVGQSLHKDPSQELSDRLFFL 917
            P P PPP + +      R +  +     S GL   +   E       G      D   L    R  ++  K +K    GS+GI   +  N+    +R + A +QY++ +NP +E+R +R  +L +H +LIGK  AFDG  LF+P RL +   ++ SK   +G  V + ITL   L PT   CLQ YNI+ RR++K++ + Q+GR YY+P  P  IP HRL +WPG+ TSI  YE  +ML  DVSH++LR++TVL FM++   Q   + FQ +V+K+L+G VVLT+YNNKTYR+DDI WD++P+S F+  +G E+S++EYYRK YN+E+TD  QP+L+ +PK  +G    G       LIPELC +TGLTD +R DF VMKD+A HTR+TP QR+  + + ID I+K      EL+ W L  D +LLS  GR L  EKI  G KT   N Q ADW +E     +IS   ++ WL+++T+R+ + A   +Q + +  P MG+Q        + DDRTE+YLR +++ +    Q+VVC+  ++R D+Y A+KK  C D P PSQC+ ART+ +   + ++  K+ALQ+N K+GGELW ++IP+K VMI+GID YHD + G RSI GFVAS N+  TRW+SRC FQ  GQEL+DGLKVC  +AL+ ++  N  +P +IIV+RDGVGDGQ++ + NYEV Q  +C   +G  Y P+L V+VV+KR++ R F+    +L+NP PG+V+D  +TR EW+DFF+VSQ VR G+V+PTHY V++D++G+ PDHIQRL+YKL H+YYNWPG IRVPAPCQYAHKLAFLVGQS+H++P+  LS+RL++L
Sbjct:   35 PRPQPPPAEGELFGRG-RQRGTAGGTAKSQGLQISAGFQELSLAERGGRRRDFHD---LGVNTRQNLDHVKESK---TGSSGIIVRLSTNHFRLTSRPQWALYQYHIDYNPLMEARRLRSALLFQHEDLIGKCHAFDGTILFLPKRLQQKVTEVFSK-TRNGEDVRITITLTNELPPTSPTCLQFYNIIFRRLLKIMNLQQIGRNYYNPNDPIDIPSHRLVIWPGFTTSILQYENSIMLCTDVSHKVLRSETVLDFMFNFYHQTEEHKFQEQVSKELIGLVVLTKYNNKTYRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRG--PGGTLPGPAMLIPELCYLTGLTDKMRNDFNVMKDLAVHTRLTPEQRQREVGRLIDYIHKNDNVQRELRDWGLSFDSNLLSFSGRILQTEKIHQGGKTFDYNPQFADWSKETRGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAYLRVLQQKVTADTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAIATKIALQMNCKMGGELWRVDIPLKLVMIVGIDCYHDMTAGRRSIAGFVASINEGMTRWFSRCIFQDRGQELVDGLKVCLQAALRAWNSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQFLDCLKSIGRGYNPRLTVIVVKKRVNTRFFAQSGGRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDNSGLKPDHIQRLTYKLCHIYYNWPGVIRVPAPCQYAHKLAFLVGQSIHREPNLSLSNRLYYL 861

The following BLAST results are available for this feature:

BLAST of TCONS_00013961-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013961-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIWL1	0.000e+0	46.66	Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1...	[more]

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TCONS_00013961-protein (polypeptide) - C. hemisphaerica