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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026714 ID=TCONS_00026714|Name=TCONS_00026714|organism=Clytia hemisphaerica|type=transcript|length=1657bp
NTGTAATAAATGCTTCATTAATAAAGGAAAGAAGCACATAATCAAGAAAT
GCTTTTCGAAACATTGAACAATATTGTTTAGTCCGTTTTACCAGGACTGA
ATTTAAGTCTCAGGCCTTTCTTCTTATAAGTGATTTCTATTCCTATTAAA
ATTCAGTATAACAAAAGACAAACtctacaaaaatattaactaaATACTAA
TTTTAGCATttataaattaaattcattCAAATAAAACATATCTTTTTAAT
TCATGTAAGACCTATCACAAAGCCCCTTATATTCTtggaaaatatctcaa
aatttaaGCAGCTAAATAAGACAAGCGACAAGCCTTtagttaagaatatt
taaacatAGATTTCACTGTATGGTAATAAAAGAACTCTTTATTTTTATAT
GAATGATCAAAATGACCATTATATGTCACTTTCATTCATTATACAAAAAT
AAACTGCCTTAATCTTTGAGGTTTGTGCCTAACGATGAAAGTTTAGATAG
GATTCTATATGGCATAAGTTTGCAGCTACTGAAATATCTAAGTTGTTAGT
GACTGTATTTTTAAGTCCTAGCTTGAAACTCTTGAAGATCCCCAAACTTG
TGccatttaaaagcctacttcgCTAAAAGGAGTCCCTTGACTCCCATCCC
CCACCCATCCCTATTGTAGCTATTGTATCATAAATTGGAAATATGAATCC
CTGTTTTCTAttaataaaacataaaactatcaaaaaatttcaattttcaa
aacatcgtGATCTGAAAGGCATGTGCAAAATTTAAGACCTTCCACCAAGG
CATCATTAAGGGAGCTATTGAGGAAAATATGATCAATGGCACCTCCATCT
ACATGCGTTGGAAAATCTACTAGTGGATTGAAATCTTGAAGGCAGTATAA
TAGATTtcgtttttcttcactttctttcaGCAGGTCAATATtaaaatcac
caaaaataaTATCGATATCTGGTAACTCAGATAGCACTGTGTGTAGacta
taaaaaaaaagaggTCAGTGTTTCTTGATGACTGCGGTAGAGTAAAAGAA
TGTTGAAAGTCCTGTCACAGTATGTATTTTTCTTAAGTTTTAAATGAGAA
AACCCAGATACATGCTCGTGTTCCAGAATAGAGATAGTTTCTTTGTATCC
AATCGCCAAGCTTTTAAATTTGTCTGTATCATTGttaaagatcattgtaa
aaggTTTCATGTTGTATTCCACTTCTTCAGTATTTGAATCACAATTGATT
TGAGTCTCTGCAAAGAAAACAACGTCAGAATCATAAACTTCTTTATGGTG
CTTTAGTGAAGCAGATTTTCCTCTGAGCGATCTGATATTTAGAAAGGTCA
AAACCAGATTCTCTTCTGATGGGGGGAATGAATGGAGtggttccaaaata
ttttcttcatacCGAAGTCTTTCATACTCTTCATCAGCAAGTTTACTAGA
TTTGATAGCCGAAGATGAATAATCACCAATAAGAAATAAGCCGTCGAGGG
AAGTAACACGACTCAATGCAACATACATTTGACCTGGTTTAAATTGGTTT
TGCCTATGCAGCTGAAAACTGACAACAATCTTTTGAAGTGTCAACCCTTG
CACTTTATGCACAGTACAAGCATATGCTAGAATAAGAGGAAATTGTGTCC
AGACTNN Run BLAST on NCBI protein sequence of TCONS_00026714-protein >TCONS_00026714-protein ID=TCONS_00026714-protein|Name=TCONS_00026714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
XVWTQFPLILAYACTVHKVQGLTLQKIVVSFQLHRQNQFKPGQMYVALSR
VTSLDGLFLIGDYSSSAIKSSKLADEEYERLRYEENILEPLHSFPPSEEN
LVLTFLNIRSLRGKSASLKHHKEVYDSDVVFFAETQINCDSNTEEVEYNM
KPFTMIFNNDTDKFKSLAIGYKETISILEHEHVSGFSHLKLKKNTYCDRT
FNILLLYRSHQETLTSFFL Run BLAST on NCBI transcript from alignment at sc0000581:5521..7177 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026714 ID=TCONS_00026714|Name=TCONS_00026714|organism=Clytia hemisphaerica|type=transcript|length=1657bp|location=Sequence derived from alignment at sc0000581:5521..7177 (Clytia hemisphaerica)
NNAGTCTGGACACAATTTCCTCTTATTCTAGCATATGCTTGTACTGTGCA
TAAAGTGCAAGGGTTGACACTTCAAAAGATTGTTGTCAGTTTTCAGCTGC
ATAGGCAAAACCAATTTAAACCAGGTCAAATGTATGTTGCATTGAGTCGT
GTTACTTCCCTCGACGGCTTATTTCTTATTGGTGATTATTCATCTTCGGC
TATCAAATCTAGTAAACTTGCTGATGAAGAGTATGAAAGACTTCGgtatg
aagaaaatattttggaaccaCTCCATTCATTCCCCCCATCAGAAGAGAAT
CTGGTTTTGACCTTTCTAAATATCAGATCGCTCAGAGGAAAATCTGCTTC
ACTAAAGCACCATAAAGAAGTTTATGATTCTGACGTTGTTTTCTTTGCAG
AGACTCAAATCAATTGTGATTCAAATACTGAAGAAGTGGAATACAACATG
AAAccttttacaatgatctttaaCAATGATACAGACAAATTTAAAAGCTT
GGCGATTGGATACAAAGAAACTATCTCTATTCTGGAACACGAGCATGTAT
CTGGGTTTTCTCATTTAAAACTTAAGAAAAATACATACTGTGACAGGACT
TTCAACATTCTTTTACTCTACCGCAGTCATCAAGAAACACTGAcctcttt
ttttttatagtCTACACACAGTGCTATCTGAGTTACCAGATATCGATAtt
atttttggtgattttaATATTGACCTGCtgaaagaaagtgaagaaaaacg
aAATCTATTATACTGCCTTCAAGATTTCAATCCACTAGTAGATTTTCCAA
CGCATGTAGATGGAGGTGCCATTGATCATATTTTCCTCAATAGCTCCCTT
AATGATGCCTTGGTGGAAGGTCTTAAATTTTGCACATGCCTTTCAGATCa
cgatgttttgaaaattgaaattttttgatagttttatgttttattaaTAG
AAAACAGGGATTCATATTTCCAATTTATGATACAATAGCTACAATAGGGA
TGGGTGGGGGATGGGAGTCAAGGGACTCCTTTTAGcgaagtaggctttta
aatggCACAAGTTTGGGGATCTTCAAGAGTTTCAAGCTAGGACTTAAAAA
TACAGTCACTAACAACTTAGATATTTCAGTAGCTGCAAACTTATGCCATA
TAGAATCCTATCTAAACTTTCATCGTTAGGCACAAACCTCAAAGATTAAG
GCAGTTTATTTTTGTATAATGAATGAAAGTGACATATAATGGTCATTTTG
ATCATTCATATAAAAATAAAGAGTTCTTTTATTACCATACAGTGAAATCT
atgtttaaatattcttaactaAAGGCTTGTCGCTTGTCTTATTTAGCTGC
ttaaattttgagatattttccaAGAATATAAGGGGCTTTGTGATAGGTCT
TACATGAATTAAAAAGATATGTTTTATTTGaatgaatttaatttataaAT
GCTAAAATTAGTATttagttaatatttttgtagaGTTTGTCTTTTGTTAT
ACTGAATTTTAATAGGAATAGAAATCACTTATAAGAAGAAAGGCCTGAGA
CTTAAATTCAGTCCTGGTAAAACGGACTAAACAATATTGTTCAATGTTTC
GAAAAGCATTTCTTGATTATGTGCTTCTTTCCTTTATTAATGAAGCATTT
ATTACAN Coding sequence (CDS) from alignment at sc0000581:5521..7177 >TCONS_00026714 ID=TCONS_00026714|Name=TCONS_00026714|organism=Clytia hemisphaerica|type=CDS|length=660bp|location=Sequence derived from alignment at sc0000581:5521..7177 (Clytia hemisphaerica)
NNAGTCTGGACACAATTTCCTCTTATTCTAGCATATGCTTGTACTGTGCA
TAAAGTGCAAGGGTTGACACTTCAAAAGATTGTTGTCAGTTTTCAGCTGC
ATAGGCAAAACCAATTTAAACCAGGTCAAATGTATGTTGCATTGAGTCGT
GTTACTTCCCTCGACGGCTTATTTCTTATTGGTGATTATTCATCTTCGGC
TATCAAATCTAGTAAACTTGCTGATGAAGAGTATGAAAGACTTCGgtatg
aagaaaatattttggaaccaCTCCATTCATTCCCCCCATCAGAAGAGAAT
CTGGTTTTGACCTTTCTAAATATCAGATCGCTCAGAGGAAAATCTGCTTC
ACTAAAGCACCATAAAGAAGTTTATGATTCTGACGTTGTTTTCTTTGCAG
AGACTCAAATCAATTGTGATTCAAATACTGAAGAAGTGGAATACAACATG
AAAccttttacaatgatctttaaCAATGATACAGACAAATTTAAAAGCTT
GGCGATTGGATACAAAGAAACTATCTCTATTCTGGAACACGAGCATGTAT
CTGGGTTTTCTCATTTAAAACTTAAGAAAAATACATACTGTGACAGGACT
TTCAACATTCTTTTACTCTACCGCAGTCATCAAGAAACACTGAcctcttt
ttttttatag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026714-exon-sc0000581-1491911889:5521..7177 | TCONS_00026714-exon-sc0000581-1491911889:5521..7177 | Clytia hemisphaerica | exon |
| TCONS_00026714-exon-sc0000581-1510915933:5521..7177 | TCONS_00026714-exon-sc0000581-1510915933:5521..7177 | Clytia hemisphaerica | exon |
| TCONS_00026714-exon-sc0000581-1575043694:5521..7177 | TCONS_00026714-exon-sc0000581-1575043694:5521..7177 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000581 | supercontig | sc0000581:5521..7177 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004386 | helicase activity |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004386 |
helicase activity |
Blast
The following BLAST results are available for this feature:
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