TCONS_00013471-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013471-protein
Unique NameTCONS_00013471-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1407

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013471-protein ID=TCONS_00013471-protein|Name=TCONS_00013471-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1407bp
MSSQNVETVIIDENTKVVGLIQDVGQIINAGQEVITVNQPAQSNIIDTNG
QPYHINTVPTNLIQTAVNQPVNQTHIVQCLNLSTVSTQTDNTIISYLPPN
QIHLNTAQHLTKPIGNLQVVNSTTNSNNIVLHNAAISAPHQTLPLQSIGQ
PQNFSNMVXHIVQCLNLSTVSTQTDNTIISYLPPNQIHLNTAQHLTKPIG
NLQVVNSTTNSNNIVLHNAAISAPHQTLPLQSIGQPQNFSNMVLVQNPTT
VVDTVVESQQTSKPSQPEPPTVVEHQSVETEILTSPPVENPKTKTPPTYF
CVGTLEEVEERIRKHSEETFSHFVVAKKTKSFGSPVVAIDINTKFRVHWQ
SRDLTSTEECAVQIPYEGTPFVYIGEKAYMCHLGRNKATKNKEMNDPDGQ
APKKHRSRLTKKQGCAAKIFVKQIAKFPEFTIPNNTEYLRTQMSQKLRKA
LSINGGHLVHMINYIGTLPDISEHSNHPIGEDTPLREPIDPIIREKIIEF
SWKFGEGVLPTQIKNALENYVLNELFKDKTPPSKQRRRFYPSEKDISNYI
YKAKLLSKISLHEINIMSNQIKKLKLDFPDLFIFFDLEIDGVXLDFPDLF
IFFDLEIDGVNADPNTFSEDIALKYSTATILNENRITFSCQSPNQQRLLK
MYGKQVILIEISCEANTPFPLYGLFVPTNVDYQLVYLFMVQSRNIKCIRD
GFRSIIEWNPDWKPKFLCVDHMKDTHWKHLSVFEEFLPECNFYINDDSRR
KAWTTWLKNPFNSSSVYGDTSVLLENLNSIASSYTEETLNKAAQDLEDSE
VWKLSEMLREWFSSEWLAEAKRWVVGYRNEEYMNMLHLDDTRLDDLQPIR
EEHFNCIKSKKIYDFVREYVTTLMPQYYQSYIEKNIFDYRKQCLTPVKSP
SPTSLYLLNKPACVARHLNEQIQRAGSMEYTVSQVQPGQFIVQEKKEASA
SYSVSFGDELNFPSCGCIDWLKYKLPCVHFVAIFHGFQGWETLSSLYIDS
PLFTLDFDCFDKEQVEQNLFISIQAPSHATHKQKGLASKKIEQEIIVEDT
TNLSVNKLLPLVMPPKQVVLPLPVVNRTTIEFLANRNVIVRDGDQSTQTT
SPETQQSGETQNKLSEDKGEGAILNTCENVCQELTNVIKKVDDRDMLQKV
KLDLQFVLNDVDLELSKMPTDEQPNIGEKRKINDSTGPIKAGNEPEAKKK
IPDEERPSIDTVETSNTSPESEVWLDDPELDIKLYRHHQELILNNDILSM
DIIRCVQKILRHQFHDVTGFADPELLEALNPTEIFGSDKKVLQLHRVEGH
WATSARIGRNIHIFCCTVSSKASIIQQVLKTINESGIGDNILFIERPEEN
PDEHMRNCCLHSIAYCVSFAFDIEARNMIFNEGEMRSHLSECLEDMCFSM
FPSKLIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007528XLOC_007528Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013471TCONS_00013471Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029309CaRF
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029309Calcium-responsive transcription factorPFAMPF15299ALS2CR8coord: 357..554
e-value: 7.5E-38
score: 130.5
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 952..984
e-value: 3.9E-4
score: 19.9
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 952..988
score: 8.939

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013471-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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