TCONS_00013142-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013142-protein
Unique Name	TCONS_00013142-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	488

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013142-protein ID=TCONS_00013142-protein|Name=TCONS_00013142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MLLSIFTLFGTVYFNGCEFSRLFFFFPETKKMKSYEKIPTTEDDQKPLKV
KVYKKRWLILLIFAINSLANAVLFVSITSINNIACRYYNISPALTDWAGN
GFNIVYVFIALPSAYFMDSFGVRTLVILGSSLNAIGVCLHLAGTPREHGI
VYVLSGQLMAGLSMGAILQVPARLATVWFPEHEQAKALSLAFVFNVSGLA
IGFLQPSYMVPDSDNMDEIYDGLLKMNISHVALLAVCLIFAYLFFDEKPP
LPPSYAKAVVDSSTVDEHGETPGFKLSLKLLFTDRNFMLLALVYGLQSGL
YSMFVTCLNEMANTIVSSSQIGWIGFLGNLVSIVGLMLLASIADKYKCYK
KITTRLFFVQILCWIAFSSTILYWKTATSLFVTYSFLCFFNTSFNAVGLS
FATEVSYPVTEGMSTAIVLMITNTLGFINILIFGRLVDDGYVFLMCSIVT
GMYVVAFILTFFVNEDLKRSKLEGQHNVKPLPQVSKEA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007344	XLOC_007344	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013142	TCONS_00013142	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 44..260 e-value: 7.0E-22 score: 77.2 coord: 274..480 e-value: 1.5E-19 score: 69.6
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 59..397 e-value: 1.9E-21 score: 76.3
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 59..468 score: 11.229
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 57..463 e-value: 1.57977E-18 score: 84.2877
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 36..472

Blast

[Close]

BLAST of TCONS_00013142-protein vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.560e-56
Identity = 132/442 (29.86%), Postives = 236/442 (53.39%), Query Frame = 0

Query:   39 PTTEDDQKPLKVKVYKKRWLILLIFAINSLANAVLFVSITSINNIACRYYNISPALTDWAGNGFNIVYVFIALPSAYFMDSFGVRTLVILGSSLNAIGVCLHLAGTPREHGIVYVLSGQLMAGLSMGAILQVPARLATVWFPEHEQAKALSLAFVFNVSGLAIGFLQPSYMVPDSDNMDEI--YDGLLKMNISHVALLAVCLIFAYLFFDEKPPLPPSYAKAVVDSSTVDEHGETPGFKLSLKLLFTDRNFMLLALVYGLQSGLYSMFVTCLNEMANTIVSSSQI--GWIGFLGNLVSIVGLMLLASIADKYKCYKKITTRLFFVQILCWIAFSSTILYWKTATSLFVTYSFLCFFNTSFNAVGLSFATEVSYPVTEGMSTAIVLMITNTLGFINILIFGRLVDD-----GYVFLMCSIVTGMYVVAFILTFFVNEDLKRSK 471
            P++   +    +KV ++RW ++L+F+  S+ N+  ++   SINNI   +Y +S    DW    + + Y+ + LP A+ ++ FG+RT+ + GS+LN +G  + L G+ + H     + GQL+  ++   IL +P+R+A+VWF  +E + A S+A   N  G+AIGFL P  +VP+ ++ DE+  +  ++   I  VA L   LI   + F EKP  PPS A+++  + T  +      +  S+  LF + NF+LL + YGL +G +    T LN M        ++  G IG    +  ++G ++     D+ K YK+ T  ++ + ++  + ++ T L       +F+T   + FF T +  +G  FA E++YP +EG+S+ ++ +     G I  +  G+++D+     G +FL C  +T    +   LT F+  DL+R K
Sbjct:   67 PSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKL-GSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATL--LLILVIIVFKEKPKYPPSRAQSLSYALTSPD----ASYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFT-LNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFL-CVFLT----LGAALTAFIKADLRRQK 495

The following BLAST results are available for this feature:

BLAST of TCONS_00013142-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013142-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC2	9.560e-56	29.86	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00013142-protein (polypeptide) - C. hemisphaerica