TCONS_00013126-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013126-protein
Unique NameTCONS_00013126-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013126-protein ID=TCONS_00013126-protein|Name=TCONS_00013126-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MADFLADNNACGQTILKLISRGNAIIAELLRLSDFIPPVFKLESKEDKDK
YGEILLDFSYFRSIDLFEHKLNSKPELQDLDEEFRESHLEILKRFYFAFE
SIFKYVTDLNRYLEDLDEGIFIQQTLESVLLNNDGKQLMCEALYLYGVML
LIVDMKFEGDIRERMLVSYNRYCASTAAIDSYMDDVCKLLRSTGYSNQAG
SKRPPKYPEEYFKRVPISKTFIAMVIGRLRSDDIYNQVASYPLPEHRSTA
LANHAAMLYVILYFSPQILNNQQAVMREVVDKHFPDNWVISIYMGTIVNL
IDAWDPYKAARNALNNTVDMQNVKNVASRHIDNVKSLNSQVLAYLKEGVL
VEEFVLDNIPKLMNLLRECNVTYRWLMLHTADGSKSKFHL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007332XLOC_007332Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013126TCONS_00013126Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019393WASH_strumpellin
Vocabulary: Cellular Component
TermDefinition
GO:0071203WASH complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071203 WASH complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019393WASH complex, subunit strumpellinPFAMPF10266Strumpellincoord: 23..383
e-value: 1.1E-176
score: 589.6

Blast
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BLAST of TCONS_00013126-protein vs. Swiss-Prot (Human)
Match: WASC5 (WASH complex subunit 5 OS=Homo sapiens GN=WASHC5 PE=1 SV=1)

HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0
Identity = 266/384 (69.27%), Postives = 330/384 (85.94%), Query Frame = 0 
Query:    1 MADFLADNNACGQTILKLISRGNAIIAELLRLSDFIPPVFKLESKEDKDKYGEILLDFSYFRSIDLFEHKLNSKPELQDLDEEFRESHLEILKRFYFAFESIFKYVTDLNRYLEDLDEGIFIQQTLESVLLNNDGKQLMCEALYLYGVMLLIVDMKFEGDIRERMLVSYNRYCASTAAIDSYMDDVCKLLRSTGYSNQAGSKRPPKYPEEYFKRVPISKTFIAMVIGRLRSDDIYNQVASYPLPEHRSTALANHAAMLYVILYFSPQILNNQQAVMREVVDKHFPDNWVISIYMGTIVNLIDAWDPYKAARNALNNTVDMQNVKNVASRHIDNVKSLNSQVLAYLKEGVLVEEFVLDNIPKLMNLLRECNVTYRWLMLHTADGS 384
            M DFLA+NN CGQ IL+++S GNAIIAELLRLS+FIP VF+L+ + D+ KYG+I+ DFSYF+  +L+E KL++KPELQDLDEEFRE+++EI+ RFY AF+S+ KY+ DLNRYL+DL+EG++IQQTLE+VLLN DGKQL+CEALYLYGVMLL++D K EG++RERMLVSY RY A+ ++ DS MDD+CKLLRSTGYS+Q G+KRP  YPE YF+RVPI+++FI+MVIGRLRSDDIYNQV++YPLPEHRSTALAN AAMLYVILYF P IL+  QA MRE+VDK+FPDNWVISIYMG  VNL+DAW+PYKAA+ ALNNT+D+ NV+  ASR+    + +++QV  +LKEG L EE VLDNIPKL+N LR+CNV  RWLMLHTAD +
Sbjct:    1 MLDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPAVFRLKDRADQQKYGDIIFDFSYFKGPELWESKLDAKPELQDLDEEFRENNIEIVTRFYLAFQSVHKYIVDLNRYLDDLNEGVYIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGAKRPSNYPESYFQRVPINESFISMVIGRLRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIVDKYFPDNWVISIYMGITVNLVDAWEPYKAAKTALNNTLDLSNVREQASRYATVSERVHAQVQQFLKEGYLREEMVLDNIPKLLNCLRDCNVAIRWLMLHTADSA 384
The following BLAST results are available for this feature:
BLAST of TCONS_00013126-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WASC50.000e+069.27WASH complex subunit 5 OS=Homo sapiens GN=WASHC5 P... [more]
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