TCONS_00012621-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012621-protein
Unique Name	TCONS_00012621-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	411

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012621-protein ID=TCONS_00012621-protein|Name=TCONS_00012621-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
MTSTEESKDVEFDYGDEFFTKSAQDTVESQDADPAQLTETNTSVESKEEL
NQNRIENKLPELEITDHEQDVMKSTGEKQASINDITSEPGESPETEEARV
ETNAESDGEVDEWDELQLDPKNSAENPENMTSPMEFKEALQFFENIDLNQ
YADKIRTAPKRSGISSVFHNIVGPPKLHKSLVPERNLIFTLALIPFQNDE
LVHVRILQTLYKSLSNRKFDCPRFGPHWELIGFQGNDPSTDLRGCGMLGL
LTTLHFVTSSNTKTLASNIYQLSRHEIQNFPFCVMSINITRISLQVLRSG
KINKECNQRLKQRHKSKQKYTNDIDLTVYDVFQELYEAIFYKLYTVWKNE
GKTMTESGFVIRDIETLAKQKPMDLLKNYRKRLSSEGSKKKNGGNQNEEK
IESFVGIEDLG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007080	XLOC_007080	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012621	TCONS_00012621	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006816	ELMO_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006816	ELMO domain	PFAM	PF04727	ELMO_CED12	coord: 187..360 e-value: 7.1E-35 score: 120.6
IPR006816	ELMO domain	PROSITE	PS51335	ELMO	coord: 202..372 score: 23.347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..411

Blast

[Close]

BLAST of TCONS_00012621-protein vs. Swiss-Prot (Human)
Match: ELMD3 (ELMO domain-containing protein 3 OS=Homo sapiens GN=ELMOD3 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.173e-68
Identity = 123/313 (39.30%), Postives = 182/313 (58.15%), Query Frame = 0

Query:  111 DEWDEL-----QLDPKNSAENPENMTSPMEFKEALQFFENIDLNQYADKIRTAPKRSGISSVFHNIVGPPKLHKSLVPERNLIFTLALIPFQNDELVHVRILQTLYKSLSNRKFDCPRFGPHWELIGFQGNDPSTDLRGCGMLGLLTTLHFVTSSNTKTLASNIYQLSRHEIQNFPFCVMSINITRISLQVLRSGKINKECNQRLKQRHKSKQKYTNDIDLTVYDVFQELYEAIFYKLYTVWKNEGKTMTESGFVIRDIETLAKQKPMDLLKN---YRKRLSSE-----GSKKKNGGNQNEEKIESFVGIEDL 410
            +EW+ +     +   + S+E P  + S   F EALQ F+ +DL+ +  +I+   +R+G++++ H + GPPKLH+ L  ER+L+ T+A     + + VH R+LQT+YK L+  KFDC   G HWE +GFQG +P+TDLRG G L LL  L+ V  S T  +A  I++LSRH IQ FPFC+MS+NIT I++Q LR   +++ECN++ K                V  V    Y A F  L  VW+ + KT+++SGFV++++E LAK+ P  LLK    Y  R+S       G++K  G      K  +F G  DL
Sbjct:   77 EEWEAVDTIQPETGSQASSEQPGQLIS---FSEALQHFQTVDLSPFKKRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQK----------------VIPVVNSFYAATFLHLAHVWRTQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFKDLTFTGESDL 370

The following BLAST results are available for this feature:

BLAST of TCONS_00012621-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012621-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ELMD3	1.173e-68	39.30	ELMO domain-containing protein 3 OS=Homo sapiens G...	[more]

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TCONS_00012621-protein (polypeptide) - C. hemisphaerica