TCONS_00010818-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010818-protein
Unique NameTCONS_00010818-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1753

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010818-protein ID=TCONS_00010818-protein|Name=TCONS_00010818-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1753bp
ADKLLDSVDTTDTQSVASLVNVFILSANVPKVGEGGGTESVENEANFGGV
EIVNEDDLVAQQAKEAEVRKQATKLMSIMKSTVSNQTTFSGLAAVFTASN
DFVSDKNVGEDNEALGLATDTNILASNNFIDKLSTPSQGGERLGPEQLEE
YTEIALSSLSKSIDANAKGVNKATNVDIIGTANEQTDLERSEAVEKENDE
KEKKKKNVQNLRETVRRLADAVGQQQVIGRKQTTIAGNNVRIGIKTMSSA
DDFANQQLSTDPDNPFATGVKMPPSFLNGSEFGGITVRAITDKMNVFPEL
NGTNNIGSEISTVSFASTNGSEIAIENSEQPFLHQIQNNPDSFQSTNVSL
RFPGFAIIKAIQLDSVNCTLVMSIKALNDHDPITNLSITNLTVLIQYNKA
PSSNDYDVKILLRNNNTEVTIGNQSPIFSANQSSLATDVNGRSVFARKAN
DTSIVMWNFDQYAYASLSNNKTELYFQFNYEGPVADTYSQNNPFNFDEIE
FAGAFNYSLTTLCASCRYANLTTNTWQEDGCEIIPDRTRLSMTSCECNHF
TSFGSFVVKPNPLKPLTLAALKDGYVLLVTVGSILLLYLVGLLFTRRADR
DDSSKIGVCPLPDNRPEDRYLYEVTVNTGSRRRAGTTSNVYFTLSGDLGD
TGVRVLKDPKRRTFQRSSSDVFVMTTAGSLGDLTYLKVWHDNKGGGWYLR
SLEIIDLQTEERFVFIAGRWLSVDQSDGLLECSLPVAGAIELKDFNYIFS
AKSRRDLSDAHIWFSIYARPPRSNFTRSQRLSVGVSLLFTAMVASCMFFG
LGRGDPAEENRIGNFSFTWKQVYIAIISACITIPINVILVGLFRSIRPAR
VDLGESFAPSITSSHYKNEGYEGFDTDSEIYEMTENRIDSSSPSNEKLIK
DGLRRQDSLHLTLSPNQTTITDKNSKTDPKKYEKSKKTKKREPFYLPHWV
IYPAWCLNLIVIFGCAFIVVWYGISFGNKTSLDWLASVSIGLVQDILVIQ
PLKVFFVALFVALIVKKLDDEERSEIEKHVKTLAKNETWLHTSLEERDKT
TIFDRIDTETAEPPNKEKLDRMRAARLKEIKMNAISREILLYLFFTCIVF
ILGFMTRDYRSFYQTRDLEELMLLKTRTDEDKSILKRYAPPFPFRKTHRH
EHFWNWVEGFLLPELFPEKWFNISEEFNYDKNVFLFPNKLFLNDMNSKVV
TGIRLRQVRVEKDSCIKAEEVRPFINIDCATGYSAARETRNDYNYNWSQP
KTYKRSINPSDMPWRYQSWSDLDGYPMWAELDTYYGGGYVVELFPKWNNK
ANLENLKKRRWVDRHTRAVIVEFAIYNGNTNYFDSVNIIFEFPPGGGIVH
YHSVITFKMYRYTDQYAFFMILCEVMFICFMIMFAIRESKVFYRTGMPYF
KEFWNLVEFANIILSILAVFFNFYRDHLVKKLLSRLPRNERSPDKYINLQ
FAAYWDLVFTYIVALICFFVTLKFIKLLRFNRRISMLSSTLKRAWYPLMM
FGICFGLVLASATMSATLIFGGNLYGYRSIGHSVSSIVSLLLGKFSYYQF
ESTNRVLGPVFFLSFNVFVNWIIMNMFISILNDVLIEVHTDVKLQNNDYE
MVDYMLDSVKSWFGFSQSSKQKAVMQDAWEEDREEADNLANSLVKSSQMR
MSRMSRRSRYSLRSQARSITSIKQEIKREARAKEKMYEYSGLQDYSAIYG
GGNSRVFNTDLTFLMVEDENDDKFIDETLNKFVNCVSFLNNDEMGQTKPK
SYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006069XLOC_006069Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010818TCONS_00010818Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001024PLAT/LH2_dom
IPR013122PKD1_2_channel
IPR000203GPS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..221
NoneNo IPR availableGENE3D1.20.120.350coord: 995..1487
e-value: 7.2E-7
score: 28.1
coord: 1547..1732
e-value: 0.042
score: 12.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..935
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..208
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 620..732
e-value: 6.0E-9
score: 45.7
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 622..727
e-value: 9.1E-17
score: 61.6
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 619..745
e-value: 3.4E-35
score: 120.4
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 620..735
score: 35.294
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 619..729
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1144..1585
e-value: 1.9E-98
score: 329.8
IPR000203GPS motifPROSITEPS50221GPScoord: 510..562
score: 10.663

Blast
BLAST of TCONS_00010818-protein vs. Swiss-Prot (Human)
Match: PKDRE (Polycystic kidney disease and receptor for egg jelly-related protein OS=Homo sapiens GN=PKDREJ PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.572e-80
Identity = 296/1174 (25.21%), Postives = 510/1174 (43.44%), Query Frame = 0
Query:  524 NTWQEDGC---EIIPDRTRLS---MTSCECNHFTSFGSFVVKPNP--LKPLTLAALKDGYVLLVTVGSILLLYLVGLLF--TRRADRDDSSKIGVCPLPDNRPEDRYLYEVTVNTGSRRRAGTTSNVYFTLSGDLGDTGVRVLKDPKRRTFQRSSSDVFVMTTAGSLGDLTYLKVWHDNKG--GGWYLRSLEIIDLQTEERFVFIAGRWLSVDQS-DGLLECSLPVAGAIELKDFNYIFSAKSRRDLSDAHIWFSIYARPPRSNFTRSQRLSVGVSLLFTAMVASCMFFGLGRGDPAEENRIGNFSFTWKQVYIAIISACITIPINVILVGLFR-SIRPARVDLGESFAPSITSSHYKNEGYEGFDTDSEIYEMT--------------ENRIDSSSPSNEKLIKDGLRR-QDSLHLTLSPNQTT------ITDKNSKTDPKKYEKSKKTKKREPFYLPHWVIYPAWCLNLIVIFGCAFIVVWYGISFGNKTSLDWLASVSIGLVQDILVIQPLKVFFVALFVALIVKKLDDEERSEIEKHVKTLAKNETWLHTSLEERDKTTIFDRIDTETAEPPNKEKLD----RMRAARLKE----------IKMNAISREILLYLFFTCIVF-------ILGFMTRDYRSFYQTRDLEELMLLKTRTDEDKSILKRYAPPFPFRKTHRHEHFWNWVEGFLLPELFPEKWFNISEEFNYDKNVFLFPNKLFLNDMNSKVVTGIRLRQVRVEKDS--CIKAEEVRPFIN------IDCATGYSAARETRNDYNYNWSQPKTYKRSINPSDMPWRYQSWSDLDGYPMWAELDTYYGGGYVVELFP---KWNNKANLENLKKRRWVDRHTRAVIVEFAIYNGNTNYFDSVNIIFEFPPGGGIVHYHSVITFKMYRYTDQYAFFMILCEVMFICFMIMFAIRESKVFYRTGMPYFKEFWNLVEFA-NIILSILAVFFNFYRDHLVKKLLSRLPRNERSPDKYINLQFAAYWDLVFTYIVALICFFVTLKFIKLLRFNRRISMLSSTLKRAWYPLMMFGICFGLVLASA-----TMSATLIFGGNLYGYRSIGHSVSSIVSLLLGKFSYYQFESTNRVLGPVFFLSFNVFVNWIIMNMFISILNDVLIEVHTDVKLQNND-YEMVDYMLDSVKSWFGF-SQSSKQK 1622
             +W E  C    ++  R +L    +T    +        +V PNP  L+   + +L    V L TV  I+LLY VGL F    R + D   +  V  LPDN P D   Y VT+ TGSR  +GT +NV+  L G +  + V  L  P   T  R S + F++TT   LGD+  ++VWH+N+G    WYL  +++ +L +   ++FI  +WLSVD + D     + P    +  KDF +I       +L   H+WFSI+A      F R QRLS  +++L ++++ + MFF L R +  E           + + I I S  ITIP+ +++  LF  S R  + DL E            +E +E +      YE                + R+  +SP      K   R+ Q     TL PN  +        D +S+  P + +  ++ KK+    LP W +Y AW L        +F +V+YG+++G   S++WL +      Q +L++QP K+  ++ F            R+   K+ K L+ +  + +T +          R+D     P   +++     R+R  R+ +           +   I R  LL+L +    F       IL  + R    FY  +       ++ R   D + + +             E  + W+   LLP L  +                   N  FL + +SK++    +RQVR +     C+ AE+   F+       I C   Y    E   +Y+  W++    K++I+ S   + Y+       Y  +  L TY  GGY +  FP   ++N+   L+ L++  W+D  T AV++E   +N + N F S+++IFE    G +    S+ +F +  + D+ A   I   V  + F + + + E  +  +    Y +  +NL+ FA   I ++L V   F R H +   + R   +  +P+ +I     +  D +   I+  + F   LK ++  RF   + +    ++ A     + GIC    + S           L+FG + + Y ++ HS  ++ S  +  F   +F S NR+LG +F  SF + +  +++N+F +++     E+   V  + +D  E + Y+   +++ F F +  SK K
Sbjct: 1125 TSWYEVHCICKNVVRARRQLGTIGLTGIHLHTHYVMAKVIVIPNPVDLRLNIIKSLHQNPVTLFTVLFIILLY-VGLAFWALYRDEMDQHLRGHVIVLPDNDPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGTVSTSDVHCLSHPHFTTLYRGSINTFLLTTKSDLGDIHSIRVWHNNEGRSPSWYLSRIKVENLFSRHIWLFICQKWLSVDTTLDRTFHVTHP-DERLTRKDFFFI---DVSSNLRKNHMWFSIFASVVAKTFNRLQRLSCCLAMLLSSLLCNIMFFNLNRQEQTESRERKYM----RSMMIGIESVLITIPVQLLITFLFTCSQRKPQADLKEVSPQKHPLMSEASEHWEEYLRKWHAYETAKVHPREVAKPASKGKPRLPKASPKATSKPKHRHRKAQIKTPETLGPNTNSNNNIEDDQDVHSEQHPSQ-KDLQQLKKKPRIVLPWWCVYVAWFLVFATSSISSFFIVFYGLTYGYDKSIEWLFASFCSFCQSVLLVQPSKIILLSGF------------RTNKPKYCKNLSWSTKYKYTEI----------RLDGMRMHPEEMQRIHDQIVRIRGTRMYQPLTEDEIRIFKRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQ------FIRDRFSMDLATVTKL------------EDIYRWLNSVLLPLLHNDL------------------NPTFLPESSSKILGLPLMRQVRAKSSEKMCLPAEK---FVQNSIRREIHCHPKYGIDPEDTKNYSGFWNE--VDKQAIDESTNGFTYKPQGTQWLYYSYGLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNWLDEKTWAVVLELTTFNPDINLFCSISVIFEVSQLGVVNTSISLHSFSLADF-DRKASAEIYLYVAILIFFLAYVVDEGCIIMQERASYVRSVYNLLNFALKCIFTVLIVL--FLRKHFLATGIIRFYLS--NPEDFIPFHAVSQVDHIMRIILGFLLFLTILKTLRYSRFFYDVRLAQRAIQAA-----LPGICHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHSTQTVFSYCVSAFQNTEF-SNNRILGVLFLSSFMLVMICVLINLFQAVILSAYEEMKQPVYEEPSDEVEAMTYLCRKLRTMFSFLTSQSKAK 2214          
The following BLAST results are available for this feature:
BLAST of TCONS_00010818-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKDRE1.572e-8025.21Polycystic kidney disease and receptor for egg jel... [more]
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