TCONS_00008832-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008832-protein
Unique NameTCONS_00008832-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length684

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008832-protein ID=TCONS_00008832-protein|Name=TCONS_00008832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=684bp
HFFIATFNLVKMFGGGHKKFRVKVTTGKAKGAGTNATINIKLIDHEGNVS
ESHVLDKWLHNDFEYGKIDSYTIYVEKTFGRCEHIILHRDEIGLNDSWYV
EHVTVEHETEADAHFPLSRWLPANTEMQFKKFDSQLPQVVKKEHPEVYQQ
RQNELDQKKKDFAYAPIANKERMPRTVTSLPPEETFHRNYIFDLLETKFT
GVISQYLKKMRYEDEFASFDDMYKVYYGPLSPFTVPAGHSGWRTDEKFAR
LRLTGPNCTVIRGVKKDGGLPTNFPVDKDNLAKHFMEGQSFQQAQDADRL
FYIDFKDLDGYIAKSSGKPMVAPLALFYARMDGTLIPLAIQLFQKNADSN
PIFYPPPIDDEKVWCHAKFWFGVADSNYHEPVTHLLQTHLVAGDFITCFH
HMISPSHPVYKLMLPHFIYLLNINTDGMPVLTAEDGAFNKILTFGLDNCY
DLMYKKYQTFKLSDAYLATDLSNRGVENLPNYHYMEDAKPMFKAIEDYIT
ASLKTIYGGKDQVLKDDFEMQNFAKLLCDKTEGMRGVWGDGTFTKLDDLS
KTLSTMVFILSNVHAAANFNQYDEYGYPPNLPFRLDGAPPTDKSPVTEDY
LVKLFDVNVTLATMDLGRTLSMQGTNKIGNYETRYEYKPDVLKHYLSFIE
ALKKVGADNDSKNAKRSNPYPWLSPKVVPNSISI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004959XLOC_004959Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008832TCONS_00008832Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR001024PLAT/LH2_dom
IPR020834LipOase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013819Lipoxygenase, C-terminalPRINTSPR00087LIPOXYGENASEcoord: 361..378
score: 32.54
coord: 399..419
score: 37.55
coord: 379..396
score: 43.02
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 231..600
e-value: 5.3E-44
score: 150.6
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 130..684
score: 77.404
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 144..684
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 18..132
e-value: 5.1E-5
score: 26.5
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 21..123
e-value: 3.9E-16
score: 59.6
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 16..130
e-value: 7.2E-23
score: 80.4
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 18..135
score: 27.301
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 16..126
NoneNo IPR availableGENE3D1.20.245.10coord: 196..292
e-value: 1.5E-7
score: 30.0
coord: 293..683
e-value: 5.3E-86
score: 288.3
NoneNo IPR availableCDDcd00113PLATcoord: 18..129
e-value: 5.90884E-18
score: 79.6904
IPR020834Lipoxygenase, conserved sitePROSITEPS00081LIPOXYGENASE_2coord: 406..416

Blast
[Close]
BLAST of TCONS_00008832-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 2.413e-74
Identity = 192/689 (27.87%), Postives = 327/689 (47.46%), Query Frame = 0 
Query:   20 FRVKVTTGKAKGAGTNATINIKLIDHEGNVSESHVLDKWLHNDFEYGKIDSYTIYVEKTFGRCEHIILHRDEIGLNDSWYVEHVTVEHETEADAHFPLSRWLPANTEMQFKKFDSQLPQVVKKEHPEVYQQRQNELDQKKKDFAYA------PIANKERMPRTVTSLPPEETFHRNYIFDLLETKFTGVISQYLKKM--RYEDEFASFDDMYKVYYGPLSPFTVPAGHSGWRTDEKFARLRLTGPNCTVIRGVKKDGGLPTNFPVDKDNLAKHFMEGQSFQQAQDADRLFYIDFKDLDGYIAKSSG----KPMVAPLALFYARMDGTLIPLAIQLFQKNADSNPIFYPPPIDDEKVWCHAKFWFGVADSNYHEPVTHLLQTHLVAGDFITCFHHMISPSHPVYKLMLPHFIYLLNINTDGMPVLTAEDGAFNKILTFGLDNCYDLMYKKYQTFKLSDAYLATDLSNRGV---ENLPNYHYMEDAKPMFKAIEDYITASLKTIYGGKDQVLKDDFEMQNFAKLLCDKTEGMRGVWGDG---TFTKLDDLSKTLSTMVFILSNVHAAANFNQYDEYGYPPNLPFRLDGAPPTDKSPVTEDYLV-KLFDVNVTLATMDLGRTLSMQGTNK--IGNY-ETRYEYKP--DVLKHYLSFIEALKKVGADNDSKNAKRSNPYPWLSPKVVPNSISI 684
            + V V TG    AGT+  I + L+   G  SE H+LDK  +NDFE G +DSY + V++  G  + + + + +  LND WY++++T++        FP  RW+  + E+  +   ++L +    +   + Q R+ EL+ ++K + +       P++   +  +    LP +  F      D +      + + ++ +    ++  +  F D  K++   +S        + W+ D  F    L G N  +IR   +   LP   PV  + +        S +Q      +F +DF+ LDG  A  +     + + AP+ L Y  +   ++P+AIQL Q   D NPIF P   D +  W  AK W   +D + H+ +THLL+THLV+  F    +  +   HP++KL++ H  + + INT     L  E G F+K    G      ++ +  +    +       +  RG+   E++P Y Y +D   +++AI  + TA +  IY   DQV+++D E+Q+F   +     GMRG    G   +    + LS+ L+ ++F  S  HAA NF QYD   + PN P  +   PPT K  VT + +V  L D   +   +     LS    N+  +G Y E  +  KP  + +  +   +EA+  V A+   +N K+  PY +LSP  +PNS++I
Sbjct:    4 YTVTVATGSQWFAGTDDYIYLSLVGSAG-CSEKHLLDKPFYNDFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLRDGRAKLAR--DDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKCHK---DLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVK-ISNTISERVMNHWQEDLMFGYQFLNGCNPVLIRRCTE---LPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPS--DAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTF-TAEVVDIYYEGDQVVEEDPELQDFVNDV--YVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAE---RNKKKQLPYYYLSPDRIPNSVAI 674
The following BLAST results are available for this feature:
BLAST of TCONS_00008832-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX52.413e-7427.87Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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