TCONS_00007613-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007613-protein
Unique Name	TCONS_00007613-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	742

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007613-protein ID=TCONS_00007613-protein|Name=TCONS_00007613-protein|organism=Clytia hemisphaerica|type=polypeptide|length=742bp
MAAGRFIVMRCPSDELSLSNKLVFNPNDMVEILKTEKVQEHNVYAEAQNR
YFGIASHQKVPRGKVGLSGMQREFLGTSEQTEVDIKMNSGATHSKFCISS
LTVEVDFLLKKNITNEAYDTDKLQTQFRDQFNQIPFYNEQRLAFKFQKLP
YISLKVKSFKYLLEGQHGSHGSHGILNQNTLIVFDKNEESVIKLTGKSRG
KSAMPNIINPDWNFSQMGIGGLDNEFSGIFRRAFASRVFPPDLIEDLGMQ
HVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPEILNKYVGESEAN
IRKLFEDAEADQKKLGSHSGLHIIILDEIDAICKQRGTVSGSTGVSDTVV
NQLLSKIDGVEQLNNILLIGMTNRKDLIDDALLRPGRLEVQMEISLPNEK
GRVQILNIHTAKLKANYKLEADFDIDSLAAQTKNFSGAELEGVVRAATTT
AMNRLVKADSAVKIDPDAVENLKVSQADFLHAIENDIKPAFGAGVEDSDH
YMSNGIIKYSDTISHILQDGQLLIKQTRLGQLVSPVTVLLEGPGGSGKTA
LAAHLAYKMSEIPFIKVVSAENMIGFSESAKCQAIRKVFDDAYRSELSCI
IVDDIERLIDYVPIGPRFSNIILQALIVLLKKKTRRGKKLLIIATTSSKD
VLSQMGMLNCFNTVIHVPTITRVEHLIKVVEDLDVFSYNDKLDIKSELEG
KQIHIAMKHLISLVEMANQHSSKASKFISLLEEQGALKPNFS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004298	XLOC_004298	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007613	TCONS_00007613	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003593	AAA+_ATPase
IPR003959	ATPase_AAA_core
IPR029067	CDC48_domain_2-like
IPR003960	ATPase_AAA_CS
IPR027417	P-loop_NTPase
IPR009010	Asp_de-COase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00830	ENDOLAPTASE	coord: 633..651 score: 25.24 coord: 259..278 score: 47.95
None	No IPR available	GENE3D	2.40.40.20		coord: 4..87 e-value: 9.3E-13 score: 47.6
None	No IPR available	GENE3D	3.40.50.300		coord: 170..402 e-value: 6.8E-39 score: 132.8
None	No IPR available	GENE3D	1.10.8.60		coord: 403..485 e-value: 2.7E-17 score: 62.3
None	No IPR available	GENE3D	1.10.8.60		coord: 670..732 e-value: 6.9E-11 score: 41.7
None	No IPR available	GENE3D	3.40.50.300		coord: 496..668 e-value: 1.5E-18 score: 66.3
None	No IPR available	CDD	cd00009	AAA	coord: 253..396 e-value: 3.40187E-20 score: 87.2015
None	No IPR available	CDD	cd00009	AAA	coord: 531..668 e-value: 1.02137E-10 score: 59.0819
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 534..671 e-value: 9.9E-13 score: 58.3 coord: 251..398 e-value: 4.7E-17 score: 72.6
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 255..395 e-value: 7.8E-40 score: 136.3 coord: 538..668 e-value: 6.1E-12 score: 46.0
IPR029067	CDC48 domain 2-like	GENE3D	3.10.330.10		coord: 90..169 e-value: 2.0E-17 score: 62.3
IPR029067	CDC48 domain 2-like	SUPERFAMILY	54585	Cdc48 domain 2-like	coord: 93..199
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 366..384
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 229..486
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 499..715
IPR009010	Aspartate decarboxylase-like domain	SUPERFAMILY	50692	ADC-like	coord: 4..86

Blast

[Close]

BLAST of TCONS_00007613-protein vs. Swiss-Prot (Human)
Match: NSF (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3)

HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 418/752 (55.59%), Postives = 546/752 (72.61%), Query Frame = 0

Query:    1 MAAGRFIVMRCPSDELSLSNKLVFNPNDMVEILKTEKVQEHNVYAEAQNRY-FGIASHQKVPRGKVGLSGMQREFLGTSEQTEVDIKMNSGATHSKFCISSLTVEVDFLLKKNITNEAYDTDKLQTQFRDQFNQIPFYNEQRLAFKFQKLPYISLKVKSFKYL----LEGQHGSHGSH----GILNQNTLIVFDKNEESVIKLTGKSRGKSAMPNIINPDWNFSQMGIGGLDNEFSGIFRRAFASRVFPPDLIEDLGMQHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPEILNKYVGESEANIRKLFEDAEADQKKLGSHSGLHIIILDEIDAICKQRGTVSGSTGVSDTVVNQLLSKIDGVEQLNNILLIGMTNRKDLIDDALLRPGRLEVQMEISLPNEKGRVQILNIHTAKLKANYKLEADFDIDSLAAQTKNFSGAELEGVVRAATTTAMNRLVKADSAVKIDPDAVENLKVSQADFLHAIENDIKPAFGAGVEDSDHYMSNGIIKYSDTISHILQDGQLLIKQTRLGQLVSPVTVLLEGPGGSGKTALAAHLAYKMSEIPFIKVVSAENMIGFSESAKCQAIRKVFDDAYRSELSCIIVDDIERLIDYVPIGPRFSNIILQALIVLLKKKTRRGKKLLIIATTSSKDVLSQMGMLNCFNTVIHVPTITRVEHLIKVVEDLDVFSYNDKLDIKSELEGKQIHIAMKHLISLVEMANQHSS--KASKFISLLEEQGALKPNF 741
            MA       RCP+DELSL+N  V N  D       +  Q   V     +RY F + +H  V  G +  S  QR++ G S   E+++ + +    +K CI ++T+E+DFL KK+I +  YDTDK+  +F  QFN   F   Q+L F F +     L VK  + +    L+G+  +        G++  N+ + F+K E S + L GK++ K    +IINPDWNF +MGIGGLD EFS IFRRAFASRVFPP+++E +G +HVKGILLYGPPG GKTL+ARQIGKMLNAREPK+VNGPEILNKYVGESEANIRKLF DAE +Q++LG++SGLHIII DEIDAICKQRG+++GSTGV DTVVNQLLSKIDGVEQLNNIL+IGMTNR DLID+ALLRPGRLEV+MEI LP+EKGR+QIL+IHTA+++ +  L AD DI  LA +TKNFSGAELEG+VRAA +TAMNR +KA + V++D +  E+L+V++ DFL ++ENDIKPAFG   ED   Y+ NGIIK+ D ++ +L DG+LL++QT+       V+VLLEGP  SGKTALAA +A + S  PFIK+ S + MIGFSE+AKCQA++K+FDDAY+S+LSC++VDDIERL+DYVPIGPRFSN++LQAL+VLLKK   +G+KLLII TTS KDVL +M MLN F+T IHVP I   E L++ +E L  F   ++  I  +++GK++ I +K L+ L+EM+ Q     +  KF++LL E+GA   +F
Sbjct:    1 MAGRSMQAARCPTDELSLTNCAVVNEKDF------QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSLPQRKWAGLSIGQEIEVSLYT-FDKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNE-KLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE-SNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPLDF 743

The following BLAST results are available for this feature:

BLAST of TCONS_00007613-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007613-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NSF	0.000e+0	55.59	Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 ...	[more]

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TCONS_00007613-protein (polypeptide) - C. hemisphaerica