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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026421 ID=TCONS_00026421|Name=TCONS_00026421|organism=Clytia hemisphaerica|type=transcript|length=1104bp
GGAGTTGCGAGCCAAAGATACCATTCAAAACAAGAAAGCGGACAAGAAGA
ACGCAACTTTCCGCGAAAATAACGCCGGTATCATCTCGCAATTGAAATCA
GAACTCATCCTTTACAAGACGAGATACAATCGAGCTATCGAGAAAGAAAA
GAGAATAAAGGTATTTATGTGAAAATATACTTCTCGGCTATTTCTCCTTT
TCGAATGAACAAACAATAAATCACAATAATAGCTACTTTTTGTTTGGTAT
TTGTCTGCAATAACACTCgtggtaaaaaaaatgtttaacaaatCAGTAGT
AAAATTACAAGTTGGATAAACTCAAATAAAATACAACTGAATTTTTGTGA
CGAAGCGTGTAGCGTAAAACCTCCAGTGGCTGTTTATTCTGGAGGAAACA
TTATCTCCGAACCAATGGCATCCGTCACCCTGACCTTCGGAGGTTAAAGG
TCTTCCCCCCTTTATGTACAAATTTTTTACTAACGAAATTATTCCATCTG
CAAGTGTTTGACCGTCAAAATGTAAGAGAtcataaatttaaattataatt
attataatagATTTTTACGAGGTATGAGCTTCATAGCTtcaaaatgttat
caatctatttgtaatttttgtttaaggaATACCAAATTCATCAACTTGAT
AAAACACATCCTTGATTCCGTGTTTGATAAGTTTTCGGTGGTGAATGATG
ATAAGATCGTCAATCTCTAATGACCGGCGTTTGTTTTGGTAATCGGTCGT
CTTTTAGTATATTCTATTGTATTCCTTGGTGGTTGATCGTCTGAGCCATT
GATTGATCATCTGTTTGAAGTCCAGGAATAAGCGCTCGTCCGATTGTTCC
AATGtcataaaagtaaagaaagGTTGACCGGAGTATACAGGGGCTTATGG
TTAAATATAGTACgcgaaaatctggaaatttcgGAGAAGTTTGCTATTGT
ATGTTAAATGATTTTGAGTGAATGCAATAGCGAGGATGATTTAgaatttt
gaattgtatttaaAGACATACCAATCATAATTATCACTTAATGATGCGCA
TGCATAATTAATTTTCCGTGCGAAATTGTTGAGAAcctgcttttccagct
tttt Run BLAST on NCBI transcript from alignment at sc0000571:188254..189357+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026421 ID=TCONS_00026421|Name=TCONS_00026421|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at sc0000571:188254..189357+ (Clytia hemisphaerica)
GGAGTTGCGAGCCAAAGATACCATTCAAAACAAGAAAGCGGACAAGAAGA
ACGCAACTTTCCGCGAAAATAACGCCGGTATCATCTCGCAATTGAAATCA
GAACTCATCCTTTACAAGACGAGATACAATCGAGCTATCGAGAAAGAAAA
GAGAATAAAGGTATTTATGTGAAAATATACTTCTCGGCTATTTCTCCTTT
TCGAATGAACAAACAATAAATCACAATAATAGCTACTTTTTGTTTGGTAT
TTGTCTGCAATAACACTCgtggtaaaaaaaatgtttaacaaatCAGTAGT
AAAATTACAAGTTGGATAAACTCAAATAAAATACAACTGAATTTTTGTGA
CGAAGCGTGTAGCGTAAAACCTCCAGTGGCTGTTTATTCTGGAGGAAACA
TTATCTCCGAACCAATGGCATCCGTCACCCTGACCTTCGGAGGTTAAAGG
TCTTCCCCCCTTTATGTACAAATTTTTTACTAACGAAATTATTCCATCTG
CAAGTGTTTGACCGTCAAAATGTAAGAGAtcataaatttaaattataatt
attataatagATTTTTACGAGGTATGAGCTTCATAGCTtcaaaatgttat
caatctatttgtaatttttgtttaaggaATACCAAATTCATCAACTTGAT
AAAACACATCCTTGATTCCGTGTTTGATAAGTTTTCGGTGGTGAATGATG
ATAAGATCGTCAATCTCTAATGACCGGCGTTTGTTTTGGTAATCGGTCGT
CTTTTAGTATATTCTATTGTATTCCTTGGTGGTTGATCGTCTGAGCCATT
GATTGATCATCTGTTTGAAGTCCAGGAATAAGCGCTCGTCCGATTGTTCC
AATGtcataaaagtaaagaaagGTTGACCGGAGTATACAGGGGCTTATGG
TTAAATATAGTACgcgaaaatctggaaatttcgGAGAAGTTTGCTATTGT
ATGTTAAATGATTTTGAGTGAATGCAATAGCGAGGATGATTTAgaatttt
gaattgtatttaaAGACATACCAATCATAATTATCACTTAATGATGCGCA
TGCATAATTAATTTTCCGTGCGAAATTGTTGAGAAcctgcttttccagct
tttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026421-exon-sc0000571-1491911889:188254..189357 | TCONS_00026421-exon-sc0000571-1491911889:188254..189357 | Clytia hemisphaerica | exon |
| TCONS_00026421-exon-sc0000571-1510915933:188254..189357 | TCONS_00026421-exon-sc0000571-1510915933:188254..189357 | Clytia hemisphaerica | exon |
| TCONS_00026421-exon-sc0000571-1575043694:188254..189357 | TCONS_00026421-exon-sc0000571-1575043694:188254..189357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000571 | supercontig | sc0000571:188254..189357 + |
Blast
The following BLAST results are available for this feature:
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